Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01141 ATGTCTGTGTCTAGACGGTTATCGGTCAGTCCTCCGCATTCTGACGTGCCGTCTACTCACGAATTCAAGCACAGAGTCATCGCCTGCCTCAATAAACTAGGCGATCGGGATACTCTTGCTGTCGCTTCCAGTGAGCTCGAGTCTATTGCGAAAACCTTGACGAATGATTTGTTCCCGCCTTTTCTCGCTTGTATTCATAATACTGATGCTACTTCGAAGTCGCCGGTGCGGAAACAATGTGTGAACTTATTGAGTCTTCTTTCAAATTTTCATGGCGATGCATTATCTCCTTTCTTATCCAAGATGATCGCTACCGTTGTTCGTCGCCTGCGTGATCCAGACTCCGCTGTGAGATCTGCCTGCGTTGACGCTTCGGCTGCCATGTCGTCGCAAATCACGAAGCCTCCGTTTTCTTATTTTCTAAAGGCGTTTATGGAGACGCTTACGATTGAGCAGGACTTTAACTCTCAGATCGGTTCCGCACTGTGCCTCGCTGCTGCAGTGGAGGCTGCGCCGGACCCGGAGGTAATGCAGTTGAGGAAGTGTTTGCCGAAGCTTGGAAAATTGGCAAAGAGCGAGGGGTTCAAAGCTAAGACGGCGCTGCTGGTTCTTATTGGAAGTATTGTTGGCGTTGGTGGCGCCTCCAGCCGAAGCGTCTTGGACTGGTTGATGCCTTGTGTGTTGGGGTTTTTGGGCAGTGAGGATTGGGCTGTAAGGAAGGCGGCGGCTGAGACACTTGGGAGGGTGGCTTTGGCGGAGAAAGACTTAGCGGCTGAATATAAATCATCGTGCATTAGTTCTTTGGAGAGTAGGAGATTTGACAAGATCAAGGTTGTCCGGGAGACTTTCAATCAGACCTTAGATTTATGGAGGGAGATATCTAATGTTCGTCAGGAGGTCTCCGTTGCGTCTCCATACCAGTCTCCTGAAAGAGATAATGGTGGTTGTAACGGTGGCGGATGCTTTCTTCATGTCTCTAAAACCTGTCATGATGGCAGTTCGAAATCTGCAGCGAAGAAAAATGCGCCCACAAATAGGCTCCAGCCATTGGCTACTTCACTTGTGACTTCCGCAATAAAAGATAGGGCTTTGAAGAGCAATGACAGGAACTTAAAAAAACACGTGACTTCAGAGCTGGACCACAAGAAACCTTCTGATTCGAACTTCGAAATTGCAGAATCAAACTCGCCTTCAAACGTGACTCTGAAAGAAGATATGAAAACGAGTGGTTGTAGTGATTTGGATTTTAGAGAAGGTAAGGGTGGTGGAAATTCCGTTGTGGAAGAAAAATCTGTGCTTTTCAATCATCCCCAAGGTGAAAAAGTTAATAATTTAAGGAGTGGAAGGCACGGTTCTCGTGTAGTTCCATTTTTGGACGATGAGTACCTAAATCCAGATGTTTATGATGGCAGCGTCTCTGATGAGGCTTTTGAGAACCAGAAAGATATTGAGGATCTCTCTTTGATTCGAGACCAACTTCTTCACATTGAAAACCAGCAATGCAATCTTCTAGACCTCCTGCAGAGATATATTGGGAGCTCCCAAAGTGGTATGAATTCTCTTGAGACGCGAGTGCATGGACTAGAGATGGCATTGGATGAAATATCTTACGACATGGTTGTATCAAATGGAAGGACACCCAACAATGATTTTGCTGAAAACACATGTTGCAAGCTGCCAGGCACAGAATTTCTTAGCTCCAAATTCTGGAAGAGATCGGAAGGGAGGTATTCTGGCTCAAGGTTTTATTCTACTGCCTGCGAACAACCACCAAATTCTCTCCATCCCATGCCCGATAAAGACAGTAAACTTGAATCAAATATGCCAGAAAGCCGAAGGTTTTATTCTCATAGTAGGAGCAAGTTAGTCGCAAATCCGTTGATAGGTGTCCATGGCAACTCTAGTGAAAATTTAAGGCTCTATTCAATGAGAATGCAGAGGAAATTAGTCGAAGAAAACGATGCTGTGAAAGGCGGCAGTGACAGTGGTACTCATGAGCCGTCGCCAACTATTCCAAAAACAGAAGCGAACTTCATCAGAGAACCGCGGAACCGACGCGAAGAGGGCTTCTTCTTCTGGAACGAGGGATTTTCTTCTGCTTCTGTTTTGTTCTCACTTCTGCTTCTGTTTTGTTCTCACTTCGCCGTCTGTTTTGCTCTCTCCTCGGACGCCAGCCGACTAACCTCGCCTCTGTTCTGTTCTTGCCTTGCCTCGCCTCGTCTCGCCTCTCCTCGTCTCGCCTCTCCTCGCCTCACCTCGTGTTTTGCAATTGCCTCGCCAGTCCAGATTCTGGATTCCAGAATTCGTCAGTCTCCTCGCCTTGTGTTCTACAATCTGCAGTCGCCTCGCCATTTTGGAACCCAATTTCCTCGTGTTCTAAACTGCTTCGATTAA 2394 46.91 MSVSRRLSVSPPHSDVPSTHEFKHRVIACLNKLGDRDTLAVASSELESIAKTLTNDLFPPFLACIHNTDATSKSPVRKQCVNLLSLLSNFHGDALSPFLSKMIATVVRRLRDPDSAVRSACVDASAAMSSQITKPPFSYFLKAFMETLTIEQDFNSQIGSALCLAAAVEAAPDPEVMQLRKCLPKLGKLAKSEGFKAKTALLVLIGSIVGVGGASSRSVLDWLMPCVLGFLGSEDWAVRKAAAETLGRVALAEKDLAAEYKSSCISSLESRRFDKIKVVRETFNQTLDLWREISNVRQEVSVASPYQSPERDNGGCNGGGCFLHVSKTCHDGSSKSAAKKNAPTNRLQPLATSLVTSAIKDRALKSNDRNLKKHVTSELDHKKPSDSNFEIAESNSPSNVTLKEDMKTSGCSDLDFREGKGGGNSVVEEKSVLFNHPQGEKVNNLRSGRHGSRVVPFLDDEYLNPDVYDGSVSDEAFENQKDIEDLSLIRDQLLHIENQQCNLLDLLQRYIGSSQSGMNSLETRVHGLEMALDEISYDMVVSNGRTPNNDFAENTCCKLPGTEFLSSKFWKRSEGRYSGSRFYSTACEQPPNSLHPMPDKDSKLESNMPESRRFYSHSRSKLVANPLIGVHGNSSENLRLYSMRMQRKLVEENDAVKGGSDSGTHEPSPTIPKTEANFIREPRNRREEGFFFWNEGFSSASVLFSLLLLFCSHFAVCFALSSDASRLTSPLFCSCLASPRLASPRLASPRLTSCFAIASPVQILDSRIRQSPRLVFYNLQSPRHFGTQFPRVLNCFD 797
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 39920205 39925083 - BLOR21928 Blo16g01141 72332

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01141 797 MobiDBLite consensus disorder prediction 365 388 - -
Blo16g01141 797 MobiDBLite consensus disorder prediction 653 679 - -
Blo16g01141 797 MobiDBLite consensus disorder prediction 365 406 - -
Blo16g01141 797 PANTHER TORTIFOLIA1-LIKE PROTEIN 4 7 655 - -
Blo16g01141 797 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 7 655 IPR033337 GO:0005874|GO:0008017
Blo16g01141 797 SUPERFAMILY ARM repeat 41 283 IPR016024 -
Blo16g01141 797 Gene3D - 23 380 IPR011989 -
Blo16g01141 797 Pfam HEAT repeat 223 250 IPR000357 GO:0005515
Blo16g01141 797 MobiDBLite consensus disorder prediction 389 406 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01141 - - - qsu:111996814 705.286
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g00409 Blo16g01141 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00570 Blo-Chr3:22477106 Blo16g01141 Blo-Chr16:39920205 6.54E-09 dispersed
Blo15g00284 Blo-Chr15:3101654 Blo16g01141 Blo-Chr16:39920205 3.19E-164 dispersed
Blo16g00822 Blo-Chr16:34525443 Blo16g01141 Blo-Chr16:39920205 4.41E-59 dispersed
Blo01g00409 Blo-Chr1:4636936 Blo16g01141 Blo-Chr16:39920205 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g803 Blo01g00409 Blo16g01141 Bda01g02242 . Bpe13g00475 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bma01g00072 . . . . . . . . . Cpe07g00613 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005532 1 2 2 1 2 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 3 2 1 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g01141 Blo_Chr16 FPKM 0.0 1.465766 0.851701 0.489895 2.107213 1.481026 1.458434 0.0 0.0 0.0