Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01146 ATGTCGGGGAACCGTTCTAAATCGGAGAAACGAGAGGACGGGAATCATTATCGGCGGGATCCTTATGAAGTCCTCGGCGTGTCGAGAAACTCCACAGATCAGGAAATCAAAAGCGCTTACCGAAGAATGGCGCTCAAGTATCATCCTGACAAGAATGCAAATGATCCTAAAGCAGCCGATATGTTTAAGGAAGCGACATTTTCCTATAAAATTTTGTCTGATCCTGATAAACGTAGGCAGTTTGATACCTCTGGTTTTGAGGCTGTTGAAAAGGATAATCAAGAATTGGAGTTAGATCTTTCAAGTTTGGGAGCTGTAAACACAATGTTTGCTGCACTTTTCAGCAAACTTGGCGTCCCAATTAAGACTACTGTTTCGGCAAACGTATTGGAGGAGGCACTTAATGGCATCGTGACCATCTGCCCACTACCTTTTGGACAGCCCACATGTAAAAAGGTTGAAAAGCAGTGTGCTCACTTTTATTCTGTTACAATATCAGAAGAGGATGCACGAGGTGGACTTGTATGCCGAGTGGAATCATCTGATAAAAGCAAATTTAAGACATCAATGGAGTTGCTGTATTTTGAACAAGAAGAAAACAGCGGATTAAGCCTTGCTCTGCAGGATGAGAGCATAAAAACCGGCAAAGTTACATCTGCTGGAATGTATTTTCTTGGTTTTCCTGTGTATCAATTTAACCACAAAAGTACTTCTATAGCTGCTGCAAAAGATCCTGATTCTGGCTTTTTTAGACGGTTGGATGGGTTGCAGCCTTGTGAAATAACTGAACTGAAGGCAGGAACACATTTTTTTGCCGTCTATGGTGATAACTTTTTCAAAAGTGCGAGCTACACAATAGAGGCTGTTTGTGCTGCACCATTTGCCAGACAAAAGGATAATATTCGGGCCGTGGAAACTGAACTTTTGGCGAAAAGGGTTGAAATATCAAAATTCGAAACTGAATATAGAGAGGTACTGGCACAATTCACCGAGATGACCAGTAGATATGCACGAGAGAAGCAAGAGATCGACGAGCTTCTCAAGCAATGGGATGAAATACATGCCTCTTACACAACAATTCCTCCGATTAAGCTGAGTAAGAGCGGAAGTAGGGGCTCTTTTAAGGAGGCAAAAGAAGAGGATCCGAAAGAGAAGAAATCTACCAGGGATCGGCCGAGAAAGAAAAAGTGGTTCATGGCACCCTTAAAAACAGACAAAAGAAAGCCCTCTTAA 1233 42.34 MSGNRSKSEKREDGNHYRRDPYEVLGVSRNSTDQEIKSAYRRMALKYHPDKNANDPKAADMFKEATFSYKILSDPDKRRQFDTSGFEAVEKDNQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSANVLEEALNGIVTICPLPFGQPTCKKVEKQCAHFYSVTISEEDARGGLVCRVESSDKSKFKTSMELLYFEQEENSGLSLALQDESIKTGKVTSAGMYFLGFPVYQFNHKSTSIAAAKDPDSGFFRRLDGLQPCEITELKAGTHFFAVYGDNFFKSASYTIEAVCAAPFARQKDNIRAVETELLAKRVEISKFETEYREVLAQFTEMTSRYAREKQEIDELLKQWDEIHASYTTIPPIKLSKSGSRGSFKEAKEEDPKEKKSTRDRPRKKKWFMAPLKTDKRKPS 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 39990618 39994259 + BLOR21933 Blo16g01146 72337

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01146 410 MobiDBLite consensus disorder prediction 371 410 - -
Blo16g01146 410 PRINTS DnaJ domain signature 57 77 IPR001623 -
Blo16g01146 410 PRINTS DnaJ domain signature 77 96 IPR001623 -
Blo16g01146 410 PRINTS DnaJ domain signature 40 55 IPR001623 -
Blo16g01146 410 PRINTS DnaJ domain signature 22 40 IPR001623 -
Blo16g01146 410 Gene3D DnaJ domain 3 104 IPR036869 -
Blo16g01146 410 ProSiteProfiles dnaJ domain profile. 20 85 IPR001623 -
Blo16g01146 410 MobiDBLite consensus disorder prediction 1 28 - -
Blo16g01146 410 MobiDBLite consensus disorder prediction 1 23 - -
Blo16g01146 410 Pfam DnaJ domain 20 82 IPR001623 -
Blo16g01146 410 CDD DnaJ 20 74 IPR001623 -
Blo16g01146 410 Coils Coil 329 349 - -
Blo16g01146 410 PANTHER CHAPERONE PROTEIN DNAJ 16 4 409 - -
Blo16g01146 410 SUPERFAMILY Chaperone J-domain 18 89 IPR036869 -
Blo16g01146 410 SMART dnaj_3 19 77 IPR001623 -
Blo16g01146 410 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 4 409 - -
Blo16g01146 410 MobiDBLite consensus disorder prediction 364 410 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01146 - - - jre:108993824 626.706
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g00407 Blo16g01146 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g01146 Blo-Chr16:39990618 Blo10g00064 Blo-Chr10:612723 4.97E-15 dispersed
Blo01g00506 Blo-Chr1:5606478 Blo16g01146 Blo-Chr16:39990618 8.42E-163 transposed
Blo07g01003 Blo-Chr7:29611452 Blo16g01146 Blo-Chr16:39990618 8.98E-09 transposed
Blo11g00943 Blo-Chr11:20321193 Blo16g01146 Blo-Chr16:39990618 7.32E-64 transposed
Blo11g00944 Blo-Chr11:20334553 Blo16g01146 Blo-Chr16:39990618 4.35E-87 transposed
Blo01g00407 Blo-Chr1:4594416 Blo16g01146 Blo-Chr16:39990618 1.49E-159 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g787 Blo01g00407 Blo16g01146 Bda01g02237 . Bpe13g00480 . . . . Cmo18g01213 . Cma18g01231 . Car18g01100 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bma01g00067 . . . . . . . . . Cpe07g00640 . . . . . . . . . . . . . . . Csa05g01687 Chy09g00629 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007840 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 2 1 2 1 1 1 1 1 1 1 1 1 1 4 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g01146 Blo_Chr16 FPKM 64.749062 71.099136 60.177288 54.363358 63.124664 58.703255 56.654369 48.250252 48.638252 49.345024