Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01148 GAAAATAATGAAGAATCATCCTCGGCGATCATGTCCGTCTCGTGCTTGGATTGCTTCTCGGACCTACTCTGCAACGAGGACTCGTCGGAAATATTGTCCGAACAGTCTCCTGTAAACTCAACGGAACTTGAATCTCCGCCTTACATCGAGGAGTCGATCGCCGGATTCATTGAAAAAGAGACCCAGCTCTTAGAAGAGGATTATTTATCGGGCTTTCAATCACAGTGGCTCGAGGCTTCTTCAAGAGCAGAGTCTGTTGCATGGATTCTCAAGAGAAATAGAACTTTTATAACAATAATGCCACTATTTGCTTATTACTTCTTCTCCATATTTTTATGTCTCCTAAGTATTGAAAGTCTTTGGATTAGTCAGATGAGATTCAAGTCGGACGTTATACCGGTCTGTAATACTGTATTTCCTCTGCTCTGTCAAACAAATGGCTGGCCGATGCAACTCCTCTCTGTTGCTTGCCTGTCACTGGCTGTTAAAATGGAGGAAACACTGCCGCCATCTTTATTGGATCTGCAGGTTGAAGGAGCGAAGTACATATTCGAACCTAAAACGATATTCAGGATGGAGCTTCTCGTGCTGGGGGTTTTAGAATGGCGATTACTATCCATAACGCCGTTCAGCTTCATCAGTTTCTTCGCATGCAAGCTCGACCCTACGGCGACTTTCTTGGGTTTTCTGATTTCGCAAGCTAAGGAAATTATCCTGTCTAATATCCGAGAAGCTGGCTTTCTCGTATTCCGGCCGTCGTGCATGGCTGTTGCGGCGTTACTCTGTGCAGCAAATGATATTCCAAATTTGTCGGTTGAAAGTCCTGAAGAAGCTGAGATGTGGTGCAAAGGGCTAAGCAAAGAAAAAATCACAGCCTGCTACAGGTTAATGCAAGAATCTCTCCTCCACAACCGCCGGAGATCGACGCCGCCGAAGATGTTACCGCAGCTCCGGTTGACAGCTATTCCGACTAGATTCAGGTCCGATGGTTTATCTTCATCATCGTCGTCATCATCGTCGTCAGTCTTTTCGGCACCACATAAGAGGAGAAAACTAGCCAACTGCTGA 1068 45.69 ENNEESSSAIMSVSCLDCFSDLLCNEDSSEILSEQSPVNSTELESPPYIEESIAGFIEKETQLLEEDYLSGFQSQWLEASSRAESVAWILKRNRTFITIMPLFAYYFFSIFLCLLSIESLWISQMRFKSDVIPVCNTVFPLLCQTNGWPMQLLSVACLSLAVKMEETLPPSLLDLQVEGAKYIFEPKTIFRMELLVLGVLEWRLLSITPFSFISFFACKLDPTATFLGFLISQAKEIILSNIREAGFLVFRPSCMAVAALLCAANDIPNLSVESPEEAEMWCKGLSKEKITACYRLMQESLLHNRRRSTPPKMLPQLRLTAIPTRFRSDGLSSSSSSSSSSVFSAPHKRRKLANC 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 40010602 40013059 + BLOR21935 Blo16g01148 72339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01148 355 Gene3D - 144 205 - -
Blo16g01148 355 Gene3D - 206 294 - -
Blo16g01148 355 PANTHER CYCLINS 13 339 IPR039361 -
Blo16g01148 355 Pfam Cyclin, C-terminal domain 207 306 IPR004367 -
Blo16g01148 355 MobiDBLite consensus disorder prediction 328 345 - -
Blo16g01148 355 PANTHER CYCLIN-D1-1 13 339 - -
Blo16g01148 355 SUPERFAMILY Cyclin-like 47 204 IPR036915 -
Blo16g01148 355 MobiDBLite consensus disorder prediction 328 355 - -
Blo16g01148 355 Pfam Cyclin, N-terminal domain 150 204 IPR006671 -
Blo16g01148 355 SMART Cyclin_C_2 207 340 IPR004367 -
Blo16g01148 355 CDD CYCLIN 147 197 IPR013763 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00878 Blo-Chr11:17153410 Blo16g01148 Blo-Chr16:40010602 1.23E-100 dispersed
Blo16g01148 Blo-Chr16:40010602 Blo11g00015 Blo-Chr11:137462 3.59E-41 dispersed
Blo16g01148 Blo-Chr16:40010602 Blo06g00865 Blo-Chr6:31916799 3.66E-94 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01148 K18810 - zju:107419860 351.673