Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01150 ATGACGCATTTAGGGATTTACAAACGCGTAGAGGATTGGAAACTTGAAGATCAGTCGCCCCAACACACCAAAAGGCGCCATGGATCGTCAGTTTTTACACTCAGGGAGATGGAAGAGGCGACTTGTTCTTTCAGCGACGAGAATTTGGTCGGAAAAGGTGGATTCGGGCGGGTTTACAGAGGAATTTTACGGTCGGGAGAGGTTGTAGCAATCAAGAAGATGGAGCTACCATCAACCAAAGAAGCCGACGGAGAACGAGAATTCCGAGTAGAAGTCGATATTCTGAGCAGACTCGACCATCCAAATCTCTTATCGTTGATCGGCTATTGTGCAGACAGAAAACATCGATTCCTCGTATACGAGTACATGCACAACGGGAACCTGCAAGATCACTTAAATGAAATAGACTGGTCTTTAAGATTGAAAGTAGCAATCGGAGCAGCCAAGGGACTTTCCTATCTACATTCAAGCCCCGCCGTCGGGATTCCCATCATTCATCGTGATTTCAAATCGACGAACATTCTTTTGAATTCCAACTTCGAGGCAAAGATATCGGATTTTGGTCTTGCGAAGTTCATGCCGGAAGGTCAGGATACCTGCGTGACGACTAGAATGTTCGGTACTTTCGGCTACTTCGATCCTGAGTATACATCGACGGGAAAACTAACCGTGCAAAGCGATGTTTACGCGTTCGGAGTCGTTCTTCTCGAGCTTTTGACGGGGCGACGAGCTGTGGAGTTAAACCAGGGACCAACCGATCAGAACCTAGTTCTTCAAGTGAGACATATTCTTAACGATCAAAAACGTCTCCGGAAAGTGATCGATCCGGCGCTCAGCCGAAGCTCCTACACGATGGCATCCATGGCCATGTATGCAAGTCTAGCATCGAGCTCCCCTTTTCTCCGCCATGGCTTCGATGGTGGTGCTCAAGGATTTTCCCAACACATCTTCGATTCCCCGGCCCGGGGTTTTCGGAGATCAGCTCGGACGGCGACTATGACCCAAGCCGAGCTCATTCAAGAGAATAATTGCCGGAAGGCTCGGTCCACGATAGATGCCCAGCATGAGCACAAAGCCTAG 1080 48.89 MTHLGIYKRVEDWKLEDQSPQHTKRRHGSSVFTLREMEEATCSFSDENLVGKGGFGRVYRGILRSGEVVAIKKMELPSTKEADGEREFRVEVDILSRLDHPNLLSLIGYCADRKHRFLVYEYMHNGNLQDHLNEIDWSLRLKVAIGAAKGLSYLHSSPAVGIPIIHRDFKSTNILLNSNFEAKISDFGLAKFMPEGQDTCVTTRMFGTFGYFDPEYTSTGKLTVQSDVYAFGVVLLELLTGRRAVELNQGPTDQNLVLQVRHILNDQKRLRKVIDPALSRSSYTMASMAMYASLASSSPFLRHGFDGGAQGFSQHIFDSPARGFRRSARTATMTQAELIQENNCRKARSTIDAQHEHKA 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 40032809 40034551 - BLOR21937 Blo16g01150 72341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01150 359 Pfam Protein kinase domain 45 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g01150 359 Gene3D Transferase(Phosphotransferase) domain 1 123 299 - -
Blo16g01150 359 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL28-RELATED 5 297 - -
Blo16g01150 359 CDD STKc_IRAK 50 302 - -
Blo16g01150 359 ProSiteProfiles Protein kinase domain profile. 44 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo16g01150 359 SUPERFAMILY Protein kinase-like (PK-like) 30 267 IPR011009 -
Blo16g01150 359 Gene3D Phosphorylase Kinase; domain 1 7 122 - -
Blo16g01150 359 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Blo16g01150 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Blo16g01150 359 PANTHER OS01G0750732 PROTEIN 5 297 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g01150 Blo-Chr16:40032809 Blo12g00288 Blo-Chr12:17085939 5.60E-85 dispersed
Blo16g01150 Blo-Chr16:40032809 Blo07g00186 Blo-Chr7:2334385 2.39E-81 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84773 PF00069 Pkinase 3.00E-46 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01150 - - twl:119992020 474.937