Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01155 ATGCTTTGTCGTTTCTCCAATAATTTTGAGAAGCCGACGAGGGAAGATTCATTGGGAATATTGACTAGCAGACATTTGACAGCAGAGAAACAAAGTGAGGCCGTAACTGGTAGAAGTCATTATGCATGTGGAACAGCAGGAAGATACAGCACCGCCGCAGCCATTGATGAGCCTATTAATCCTTCTGTCAACGTCAATTACACTCGGCTTTTGATCAACGGCCAGTTTGTCGATTCAGCTTCCGGGAAAACTTTTCCGACGTTGGACCCGAGAACCGGTGATGTCATCGCCCATGTTGCAGAGGGAGACGCCGAAGACATTGATCGAGCGGTGTCGGCCGCTCGCAGAGCATTTGACGAGGGTCCATGGCCGAAGATGACTGCTTATGAACGATCTCGGATTATTCTGCGGTTCGCCGATTTACTCGAGAAGCACAACGATGAAATTGCAGCTCTTGAAACTTGGGATAATGGGAAGCCATATGAACAATCTGCGAAAATCGAAGTTCCGATGTTTGTACGTCTGTTCCGGTACTATGGAGGTTGGGCGGATAAGATTCACGGCCTTACAGTTGCCGCCGACGGCCCTCACCACGTTCAAATCTTGCACGAACCGATCGGCGTTGTGGGTCAGATTATCCCCTGGAATTTTCCTCTTCTCATGTATGCATGGAAGGTCGGCCCGGCGTTGGCATGCGGAAACACCATTGTTCTCAAAACAGCTGAGCAGACTCCATTGTCGGCTCTGTTCGTAACTAAGCTATTGCATGAGGCCGGACTTCCAGACGGCGTTCTTAATATTGTTTCTGGGTTTGGGCCGACGGCCGGAGCTGCTCTAGCCAGTCATATGGATGTCGACAAGCTTGCATTCACAGGATCGACCGAAACCGGTAAAGTCGTGCTTGGATTGTCGGCGCAAAGCAATCTTAAGCCGGTAACTTTGGAACTTGGTGGGAAATCCCCGTTTATCGTATGCGAGGATGCGGAGGTGGATGCAGCCGTCGAACTGGCTCATTTCGCTCTATTTTTTAACCAAGGACAATGCTGCGCTGCCGGTTCACGTACTTTTGTACACGAAAGCATATACGACGAGTTTTGCGCGAAAGCGAAGGAGCGGGCAAGGACACGAGCTATTGGCGATCCGTTCAAGGATGGTATCGAACAAGGACCTCAGGCAAGTCTGTCCGAGAAAATAAGTTTTTTTACATCCGACGACAACAATTTAATCATTATCGATTCGAGACAATTTGAGAAGATTCTCAAGTACATAAAATCTGGAGTTGAAAGTGGAGCTACTCTTGAAGCTGGAGGAGAGAGACATGGCTCCAAGGGCTATTATATCAAGCCCACAGTTTTCTCAAATGTTCAAGATGACATGTTGATAGCAAAAGACGAGATCTTTGGTCCGGTTCAAACGATTTTGAAGTTCAAGAATCTTGAAGAGGTTATCAAGAGGGCAAACGCGAGTCGGTTTGGGCTGGCAGCCGGAATATTCACGAAGAACATCGACACGGCCAACACGTTAACCCGAGCGTTGCGAGTAGGGACGGTGTGGATAAATTGTTTCGATGTATTTGATGCTGGCATTCCATTTGGTGGGTATAAGATGAGTGGCCATGGAAGAGAAAAAGGATTTCACAGCCTTCAAAATTATTTGCAAGTCAAGGCTGTGACCACTCACTTGAAGAACCCTGCTTGGCTTTAG 1704 48.0 MLCRFSNNFEKPTREDSLGILTSRHLTAEKQSEAVTGRSHYACGTAGRYSTAAAIDEPINPSVNVNYTRLLINGQFVDSASGKTFPTLDPRTGDVIAHVAEGDAEDIDRAVSAARRAFDEGPWPKMTAYERSRIILRFADLLEKHNDEIAALETWDNGKPYEQSAKIEVPMFVRLFRYYGGWADKIHGLTVAADGPHHVQILHEPIGVVGQIIPWNFPLLMYAWKVGPALACGNTIVLKTAEQTPLSALFVTKLLHEAGLPDGVLNIVSGFGPTAGAALASHMDVDKLAFTGSTETGKVVLGLSAQSNLKPVTLELGGKSPFIVCEDAEVDAAVELAHFALFFNQGQCCAAGSRTFVHESIYDEFCAKAKERARTRAIGDPFKDGIEQGPQASLSEKISFFTSDDNNLIIIDSRQFEKILKYIKSGVESGATLEAGGERHGSKGYYIKPTVFSNVQDDMLIAKDEIFGPVQTILKFKNLEEVIKRANASRFGLAAGIFTKNIDTANTLTRALRVGTVWINCFDVFDAGIPFGGYKMSGHGREKGFHSLQNYLQVKAVTTHLKNPAWL 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 40075129 40081023 + BLOR21942 Blo16g01155 72346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01155 567 Pfam Aldehyde dehydrogenase family 76 557 IPR015590 GO:0016491
Blo16g01155 567 SUPERFAMILY ALDH-like 65 561 IPR016161 GO:0016491
Blo16g01155 567 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 342 353 IPR016160 GO:0016491
Blo16g01155 567 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 48 567 - -
Blo16g01155 567 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 314 321 IPR029510 GO:0016491
Blo16g01155 567 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 318 526 IPR016163 GO:0016620
Blo16g01155 567 CDD ALDH_F2BC 65 559 - -
Blo16g01155 567 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 48 567 - -
Blo16g01155 567 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 72 555 IPR016162 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00908 Blo-Chr11:18701334 Blo16g01155 Blo-Chr16:40075129 0 dispersed
Blo14g00484 Blo-Chr14:6191689 Blo16g01155 Blo-Chr16:40075129 3.95E-161 dispersed
Blo15g00791 Blo-Chr15:27024539 Blo16g01155 Blo-Chr16:40075129 2.45E-97 dispersed
Blo16g00812 Blo-Chr16:34155322 Blo16g01155 Blo-Chr16:40075129 3.31E-168 dispersed
Blo16g00815 Blo-Chr16:34253436 Blo16g01155 Blo-Chr16:40075129 0 dispersed
Blo11g00907 Blo-Chr11:18667073 Blo16g01155 Blo-Chr16:40075129 3.49E-23 transposed
Blo15g00639 Blo-Chr15:16753312 Blo16g01155 Blo-Chr16:40075129 3.06E-41 transposed
Blo01g00398 Blo-Chr1:4515469 Blo16g01155 Blo-Chr16:40075129 0 wgd
Blo13g00042 Blo-Chr13:604901 Blo16g01155 Blo-Chr16:40075129 7.65E-105 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01155 K00128 - zju:107428629 855.129