Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01157 ATGATAAAGGCGGCGCTGGACGAATGCGAGAGACTCCCAAGCAAGGGAGAGACGAAACGATGCGTCGGATCCATCGAAGACATGATCGACTTTACGACTTCCGTCCTCAGGCGAAACGTCGTCGTTCGAACGACGGGGAACGCCAAAGGGTCAAATCAACGTGTCATGATTGGATCAATCATTAGAATCAACGGTGGACAAATCACACTGTCTGTTTCTTGCCATCAGAGTTTATACCCTTATCTCCTAAACTACTGCCACTCTGTCCCAAAGGTTCGGGTCCATGAAGCGGATCTACTTGACCCGAATACAAGGGCCAAAATCAACCATGGAGTTTCCATATGCCACGTGGACACATCCGCTTGGAGTGCCTCCCACGGTGTGTTCACGGCTCTAGGTTCAGGCCCGGGTCAGATCGAGGTTGATGTAGCCGGAAACGATGAGACCTCCGTCCATTTGCCGGCGGGAGGAAACCCATATACCCCGAAAGCTTTTCTGATGAGGTACTGGAGCAAAAAGATTCCAAATAATTTTCCCAAATCCAGTTTTCTTCTATCGAAGGCGTCTCCTCTCAGCGCGGTGGATTCGGCGGCTTTCGCGAAACTTGCTGCTGAAAACTCACTCTCCACCCGCCTGCCGGAGTTTTGCTCAGCCGCAAAACTGCTTTGTTTTCCTGATTTGTTGCCGAGCTTGGAGAGGCACTCGAAGGACGCGAACTTCGCTGTTTATAGCGACCGAAACTTTACCAACTACGGCAGAGAACGAGTGGGTGGAACCGATTCTTTTCAGGCCTACTCACCCGATGAAAATATTCCGGTAGATACCTTCCGACAGTACAGCCGCGATTCATCGAGCCACAATGATAAGTTTACGAACTACGCCAATAGTGGCAACGTGGTTGACCAGAGCTTCCACACCTACGGCACTGGAGCCAATGGAGGCGCCGGAAAGTTCACCACATACGCGAACGAGGTCAATGTGGCGAACCTCGGATTTAAGTCCTACTCCAGCGGTACAAACGGGAGGACTCAATCTTTCACGAGCTATAGCGATGATGGTAATGTCGGCGACCAGTCCTTTGCAAACTACGGCAAGGAGGGCAATGGGGCTCTGAACGAGTTCACCAGCTACGGGGACAACGGAAATGTCGTCGGCACTACTTTTTCCAGCTATGGTAAAGGTGGCAACTCTGTAAATGATACATTCACTAATTACGGAAACGAACAGAATGTTCCTGAGAACACCTTCAATAATTACGGAAGAGATGGCAATGCAGCCGTAGAGAACTTCGCTAATTACAGAGATAATGCAAACGTAGGGGATGATTCATTCAAGTCCTACGCGAAGCACTCTAATGCCGCAGAAGTCGATTTCACCAATTACGGACAGTCTGGCAACGAAGGTACTGATAAATTCAGTGGGTATGGTAAGGAAGCAAATGACCCAACAGTAAATTTCAAGATCTACGGGATTAACAACACGTTCAAGGATTACGCAAAAAGTGGCGTCACTTTCTCTGGGCTACCCAACGCAAGCTCAAAAGCTTCAGCGATAATGGCGGACAGAGGCAGTCTGGTAAAAAGATGGGTGGAGCCGGGCAAATTCTTTCGGGAGTCGATGTTGAAGGAGGGAACTGTAATGCCCATGCCGGATATTAGGGATAAAATGCCGAAAAGGTCATTTTTGCCTCGAAGCATCTTGTCGAAATTACCATTTTCGAGCTCCAAAGTCTCGGAGCTGAAGAAAACTTTCCACGCCGGCGACAACTCGGCGATGGAGAGGATGATAAAGGCGGCGTTGGAGGAATGCGAGAGAAAACCAAGCGTGGGAGAGACGAAACGCTGCGTCGGATCAGTGGAAGACATGATCGATTTCGCCACTTCCGTTCTCGGGCAAAACGTCGTCGTTCGAACGACGGAGAGCGTCAAAGGGTCAAACAAACAAATCATGATCGGATCAATCAATAGAATCAACGGTGGAAAAATCACACAGTCTGTCTCTTGCCATCAAAGTCTGTACCCTTACCTACTCTATTACTGCCACTCAGTTCCAAAGGTCCGGGTCTACGAAGCGGATCTACTTGACCCGAACACAAAGGCCAAGATTAACCACGGGGTGGCGATCTGCCACGTGGACACATCCGCATGGAGCGCTTCCCACGGTGCTTTCATGGCTTTGGGTTCGGGTCCAGGTCGAATCGAGGTTTGCCATTGGATTTTCGAAAATGATATGACTTGGACAATTGCGGATTGA 2253 49.58 MIKAALDECERLPSKGETKRCVGSIEDMIDFTTSVLRRNVVVRTTGNAKGSNQRVMIGSIIRINGGQITLSVSCHQSLYPYLLNYCHSVPKVRVHEADLLDPNTRAKINHGVSICHVDTSAWSASHGVFTALGSGPGQIEVDVAGNDETSVHLPAGGNPYTPKAFLMRYWSKKIPNNFPKSSFLLSKASPLSAVDSAAFAKLAAENSLSTRLPEFCSAAKLLCFPDLLPSLERHSKDANFAVYSDRNFTNYGRERVGGTDSFQAYSPDENIPVDTFRQYSRDSSSHNDKFTNYANSGNVVDQSFHTYGTGANGGAGKFTTYANEVNVANLGFKSYSSGTNGRTQSFTSYSDDGNVGDQSFANYGKEGNGALNEFTSYGDNGNVVGTTFSSYGKGGNSVNDTFTNYGNEQNVPENTFNNYGRDGNAAVENFANYRDNANVGDDSFKSYAKHSNAAEVDFTNYGQSGNEGTDKFSGYGKEANDPTVNFKIYGINNTFKDYAKSGVTFSGLPNASSKASAIMADRGSLVKRWVEPGKFFRESMLKEGTVMPMPDIRDKMPKRSFLPRSILSKLPFSSSKVSELKKTFHAGDNSAMERMIKAALEECERKPSVGETKRCVGSVEDMIDFATSVLGQNVVVRTTESVKGSNKQIMIGSINRINGGKITQSVSCHQSLYPYLLYYCHSVPKVRVYEADLLDPNTKAKINHGVAICHVDTSAWSASHGAFMALGSGPGRIEVCHWIFENDMTWTIAD 750
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 40094567 40103673 - BLOR21944 Blo16g01157 72348

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01157 750 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 149 750 - -
Blo16g01157 750 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 1 141 - -
Blo16g01157 750 Pfam BURP domain 2 141 IPR004873 -
Blo16g01157 750 Pfam BURP domain 535 747 IPR004873 -
Blo16g01157 750 ProSiteProfiles BURP domain profile. 1 155 IPR004873 -
Blo16g01157 750 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 149 750 - -
Blo16g01157 750 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 1 141 - -
Blo16g01157 750 ProSiteProfiles BURP domain profile. 535 749 IPR004873 -
Blo16g01157 750 SMART BURP_2 1 148 IPR004873 -
Blo16g01157 750 SMART BURP_2 533 749 IPR004873 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01157 - - - qsu:112022603 896.73
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00693 Blo-Chr15:21676371 Blo16g01157 Blo-Chr16:40094567 1.12E-09 dispersed
Blo15g00694 Blo-Chr15:21748194 Blo16g01157 Blo-Chr16:40094567 9.21E-16 dispersed
Blo16g01157 Blo-Chr16:40094567 Blo01g01710 Blo-Chr1:56856213 2.30E-06 dispersed
Blo16g01157 Blo-Chr16:40094567 Blo16g01158 Blo-Chr16:40104742 2.43E-36 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g717 . Blo16g01157 . Bda11g01263 Bpe13g01460 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g01263 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005778 2 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 1 1 1 1 1 1 1 1 1 2 1 3 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g01157 Blo_Chr16 FPKM 43.216244 48.030067 113.847481 118.961639 31.116819 27.193108 30.002714 453.354248 433.234497 394.999878