Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01158 ATGCGGCAGATTGATGTTTTATCTTATTCATCGACCTACCATTGTTGCTCTGTTAGTGATTATTGCAATATTTCGGGGGAAGGGTGGGAAGATTTTGCGGCCATGGCTGCTTTTGATGCGAAGAAGCTTGAAACTGAAGAAGAAGGGGATCAATTTCCATCCATTACTGAAAATTTATGCAGGGAGGAAAATGATGACGAAGAGGACGATGGAGATTTTTCTTTCGTTTGTTTGAATGCAAACGAATCGCCGATTAGCGCCGACGATGTGTTCCAGAATGGCCAAATTCGTCAGATGTTCCCGCTATTCAACAGAAATGTGCTATTTTCCGACTTTAGAGACTGCGATCGAGAGTCGAAAGAAATGGCGGTTCTTCGACCTCATCCGGAGAAGCTATTTGTCAAGGAAAGCGATTTTGTGTCGTCCTCGTCAGCCTCTGAGTCCGACGAATTAGAGGGACTCGACGCCGGAACGTACTGCGAGTGGTCGCCCAAAGTCTTCGAGGTGTCGCCGGAGCTTATTAAAAAGAGCAACTCCACTGGCTTCTGTAAGAGTGATGGCAAGGATGCATTCGTTTTTCTGAATAATCCTGCGACGACGAAGAGCTCAAAGGCAAAGAAAGACGCCGACATTAATACTCCTTACACAGAGCAGGAGAAGAAGAGCGTCAAAGCAAAAGTGAAGAGAAGGGGGAAAAGCCAAACGGCGTCTTCGGCGCTCGAAAGGCACTACGTGAGAAACAGAGCAAAGATAGAGGAGGATAAACGGCGGTCGTATTTGCCATACAGGCAAGAACTGGTGGGGAAGGAGGATATGGCGCAAGAATCATACGAGGAGGCGATCGCCGGCTTGAGTAAGCTTCTAAGCCAGAACGCTAGCCTCGAAGGGGTCGCTGCTGCAAAAATCAAGCAGATAACGGCCGAGTTAGGAAGTGCAGGTTCGGAGCAATGCGACCCGGTCGACAGGATCAAGAAAGGGTTCCTCCACTTCAAGAAAGAGAAATTCGAAAAGGAACCTTCTTTGTACGGTGAACTTGCCAAAGGCCAGAGTCCCAAGTTTCTTGTGTTTGCGTGCTCGGATAGTAGAGTTTGCCCCTCTCACATCCTGAATTTCCAGCCTGGGGAGGCCTTTGTCGTCCGAAACATTGCCAACATGGTCCCACCATATGACCAGACAAAGTATTCTGGAGTGGGAGCTGCTATTGAATATGCAGTGTTGCATCTAAAGGTGGAGAATATCGTGGTCATTGGGCACAGTTGCTGTGGCGGTATAAAGGGACTCATGTCTATCCCAGACAACGGGACCACTGCTAGTCATTTCATAGAAGATTGGGTCAAAATTTGTTCCGCTGCGAAGAGCAAGATCAAATCAGGATGCGGTGAGTTGAGCTTCGAGGAGCAGTGTTCAAACTGTGAAAAGAACAAGATCGAAAAGGGAATTTTTACAACCCGAAGAACTATTGGATTAATTTGGCCTGCATTGGGTGCTCAGTTTTTAAGCTGTTATTTGAGAATGGCGGAATCCAAATCGGGACTAAGGAGACCGGCCTTCACGAAGGTCGACCAACTTCGTCCTGGCACGAGCGGCCACACTCTTACCATTAAGGTCGTAAATACTAAGATGGTAATGCAGAAAGGGCGACCTGACGGTCCTCAAGTTCGTCATATGCGAATTGCAGAATGCTTGGTAGGAGATGAGTCGGCCATGATTATTTTCACTGCAAGAAATGATCAAGTGGACTTGATGAAGGAAGGTGCCACTTTAACTCTGAGAAATGCTAAGATTGACATGTTTAAAGGGTCGATGAGGCTTGCCGTAGATAAGTGGGGCCGTATCGAAGCTGCTGAACCTGCCAGTTTTACCGTGAACGAAGATAACAATCTATCACTCGTTGAATTTGAGCGTGTTAATGTTCCGGTGGCCGGCGGAAAATCTGTTGAGTCACCGGTGGGGGAAAATCCGTTCACCCCGAAAGCTTTTCTGATGCGGTATTGGAGCAAAGAGATCCGAAATGGGTTACCCAAATCCAGCTTTCTGCTATCGAAAGCGTCCTCTTTGAGCGCTGTAGATTGGGCGGCTTTCGCTAAACTCGAGGCGGAAAACTCTCTCTCATCTCGCCTGCCGGAGTTCTGCTCCGCCGCTCAACTGCTTTGCTTTCCCGATTTGTCGCCGATCTTGGAGGAGCACTCGGAGTGA 2196 48.09 MRQIDVLSYSSTYHCCSVSDYCNISGEGWEDFAAMAAFDAKKLETEEEGDQFPSITENLCREENDDEEDDGDFSFVCLNANESPISADDVFQNGQIRQMFPLFNRNVLFSDFRDCDRESKEMAVLRPHPEKLFVKESDFVSSSSASESDELEGLDAGTYCEWSPKVFEVSPELIKKSNSTGFCKSDGKDAFVFLNNPATTKSSKAKKDADINTPYTEQEKKSVKAKVKRRGKSQTASSALERHYVRNRAKIEEDKRRSYLPYRQELVGKEDMAQESYEEAIAGLSKLLSQNASLEGVAAAKIKQITAELGSAGSEQCDPVDRIKKGFLHFKKEKFEKEPSLYGELAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFVVRNIANMVPPYDQTKYSGVGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASHFIEDWVKICSAAKSKIKSGCGELSFEEQCSNCEKNKIEKGIFTTRRTIGLIWPALGAQFLSCYLRMAESKSGLRRPAFTKVDQLRPGTSGHTLTIKVVNTKMVMQKGRPDGPQVRHMRIAECLVGDESAMIIFTARNDQVDLMKEGATLTLRNAKIDMFKGSMRLAVDKWGRIEAAEPASFTVNEDNNLSLVEFERVNVPVAGGKSVESPVGENPFTPKAFLMRYWSKEIRNGLPKSSFLLSKASSLSAVDWAAFAKLEAENSLSSRLPEFCSAAQLLCFPDLSPILEEHSE 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 40104742 40118764 - BLOR21945 Blo16g01158 72349

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01158 731 Pfam Protein of unknown function (DUF1645) 87 261 IPR012442 -
Blo16g01158 731 SUPERFAMILY Nucleic acid-binding proteins 506 638 IPR012340 -
Blo16g01158 731 SUPERFAMILY beta-carbonic anhydrase, cab 319 479 IPR036874 GO:0004089|GO:0008270
Blo16g01158 731 CDD SoSSB_OBF 531 613 - -
Blo16g01158 731 SMART Pro_CA_2 346 503 IPR001765 GO:0004089|GO:0008270
Blo16g01158 731 Gene3D Carbonic anhydrase 311 486 IPR036874 GO:0004089|GO:0008270
Blo16g01158 731 PANTHER CARBONIC ANHYDRASE 272 477 IPR001765 GO:0004089|GO:0008270
Blo16g01158 731 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 358 365 IPR015892 GO:0004089|GO:0008270|GO:0015976
Blo16g01158 731 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 402 422 IPR015892 GO:0004089|GO:0008270|GO:0015976
Blo16g01158 731 Pfam Carbonic anhydrase 354 478 IPR001765 GO:0004089|GO:0008270
Blo16g01158 731 Gene3D - 527 630 IPR012340 -
Blo16g01158 731 PANTHER CARBONIC ANHYDRASE 272 477 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01158 K01673 cynT, can; carbonic anhydrase [EC:4.2.1.1] - cit:102614650 324.709
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00387 Blo-Chr10:6472719 Blo16g01158 Blo-Chr16:40104742 2.54E-07 dispersed
Blo11g00914 Blo-Chr11:18868270 Blo16g01158 Blo-Chr16:40104742 7.55E-74 dispersed
Blo13g00060 Blo-Chr13:908162 Blo16g01158 Blo-Chr16:40104742 1.94E-11 dispersed
Blo16g01158 Blo-Chr16:40104742 Blo18g00336 Blo-Chr18:3485932 9.42E-93 dispersed
Blo16g01157 Blo-Chr16:40094567 Blo16g01158 Blo-Chr16:40104742 2.43E-36 tandem
Blo02g00889 Blo-Chr2:34381498 Blo16g01158 Blo-Chr16:40104742 7.59E-39 transposed
Blo18g00104 Blo-Chr18:944900 Blo16g01158 Blo-Chr16:40104742 2.56E-44 transposed
Blo13g00059 Blo-Chr13:901071 Blo16g01158 Blo-Chr16:40104742 7.66E-16 wgd
Blo16g01158 Blo-Chr16:40104742 Blo04g00737 Blo-Chr4:6879892 6.35E-25 wgd
Blo16g01158 Blo-Chr16:40104742 Blo06g00876 Blo-Chr6:32050483 7.09E-44 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g715 . Blo16g01158 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone12ag0640 . . . . . . . . . . . Bma06g00623 . . . . Cma05g00009 . Car05g00007 . Cpe07g00689 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003345 2 3 1 2 2 1 2 1 1 1 1 1 1 1 1 1 1 4 2 1 1 1 1 1 1 1 1 6 1 4 48
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo16g01158 Blo_Chr16 FPKM 26.507982 30.884531 35.264328 33.587524 39.338547 32.579731 39.077545 41.408009 37.648079 40.633633