Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo16g01194 ATGTTTCTAGAAAGGGAGTATTTTATTTTCCCCGTAGAAAGAGATATTGCCGGTAAAAACTACATTTTTGGTTTCTTCTCCCTCCCTCTCTATTCTGGTTTCTCCTTCACGGTGGCACTTCTGCTTTCATCTCCGGCATATCTCCACGCCCTCCTTCCTCTCTTCCACGACGGTCCCATTTCCATTTTATGTAGCCACCCTCTTCTTCATTTTTCTGTTTCTATCTGCCTCGTCCTGGCTATTCCCATTTCACAAGAAAAAATGTGCGGCGTTTATGATTTTTCATTGAACAGAGATTATACCCTTTGCCTGCGCATATACATATCTTATTCTATATTCGCGTTTGCAATGCAGATGACACGATCTCCTAGTCTGATTATGGATATCATTGAGATTGAAGAAAATTTGTTTGCAGTCAGCGATGCCAAGCTACATGGACAGATGTGCAAGATACTGTCTGCAACGTATTGCAAAGTGTTGTCTATTTTCCCATCTTTAGAAGCAGCAAAGCCGAGAAGTAAGTCAGGCATTCAAGCATTATGCTCCTTGCATGTGGCAATGGAGAAGACAAAAAATATTCTTCAACACTGCTCAGAATGTAGCAAACTCTACTTGGCTATAACCAGAGAGTCTGTCCTGTCCAAATTTGAGAAAGCAAGATTTTGTCTCACAGACAGTCTCAAACGGGTCGAAGACATTGTTCCGCAATCTGTTGGTTTTCAGATACAAGAGATAATTTGTGAACTCGAGAGCATTGAGTTTTCGCTTGATCCATTGGAGAAGCAAGTTGGCAATGATTTGATAATGCTACTTCAACAAGAGAGAAAATTGAGCGACTCCATTGAGAATAACGAGCTTGAATCTTTTCATCAAGCTGCATTGAGACTTGGAATAATCTCTTCTAGAACAGCCCTTATAGAGAGAAGAGCCTTAAAGAAACTTGTTGAAAAAGCTCGCACTGAAGAAGACAAGCGGAAAGAATCGATCGTGGGTTACCTTTTGCATCTCATGAGGAAATACTCAAAACTTTTTCGGAACGAGTTTTTCGATGAAAACGACTCACCAGGCTCTACGCCATGTTCACCTGAGGAAATCAGCCCTGGTTGTATCAATCAATCCTTTGAAAGGCAACTACAGAAGCATAGTTCGATTAATTTCAAGCCCGGAAATAAGAAATCAGGGCAGATGACCATCCCACCTGAAGAACTAAGGTGTCCAATATCTTTGCACCTCATGTATGACCCTGTAATTATAGCTTCTGGCCAAACATATGAAAGGAGTTGTATTGAGAAATGGTTTAATGATGGTCATAGCTCCTGTCCAAAGACTCAACAGAAACTCTCTCATCTTTCTCTGACCCCTAACTACTGCGTCAAGAGCCTTATTGCTAGTTGGTGCGAGCAAAATGGAGTTCCTCTTCCAGATGCCCCACCAGAGAGCCTGGATCTTAACTATTGGAGGCTTCCATTATCTGAATGTGAGTCTGTTAATTCAAGATCTATGGACAGCCTTAGCTCTTGCAAACTGAAGGAAGTCAAGGTTGTTCCATTAGAGGAGAGTGGCATCGTTGCGGAGACTGAAGGAAACGCATCAGATCTTTTATCTGCAGAGAAGAAAGAGTCGGATTTGAATATATTTGATAAATTCGAGTATTTCCTGACGGTTTTGAACGAAGGAGAAGACTTAAAGAAAAAATGTATGGTGGTCGAACAGATAAGGTTCTTGCTGAAGGATGACGAGGAGTCCAGGACGCTTATGGGGGCTAAAGGGTTTGTTCAAGCACTCCTTAAGTTTCTTCAGTTAGCTGTAAAAGAAGGGAATTCCAAAGCTCAAGAAAGTGGAGCCATGGCACTCTTTAACCTGGCTGTCAACAATTGCAGAAACAAGGAAATAATGTTGAAAGCTGGAGTGATTTCATTGTTGGAGCAAATGATCTTGAACTCTGATTCCCACGAGTATGCAACAGCCCTCTATCTAAATCTTTCTTGCCTTGAAGACGCCAAGCCTATCATTGGTCTAAGCTGTGCTGTTCCTTTCTTGTGTCATCTTCTTCAAACTAATGCCAAACCCCTCTGCAAGCTTGATGCCCTCCATGCCCTTTACAATCTTTCTACTCTGCCCTCCAACATTGCTAACCTCCTTTCTGCTGGAGTCATCACTGGCCTTCAATCCCTGCTTGCAGACCCTGGTGATCATGGATGGACAGAGAAGGCCATAGCAGTCTTGATACATTTGGCGTTAACCCAGTCGGGAAAAGACGAAATGAGATCTACCTCAGGCCTGATTAGTGCATTGGGAAGAATTTTGGACAGTGATGAAGCTATGGAGCAGGAGCAATCTGCATCGTGTCTCTTGATCTTGTGTGATGGCAATGAAAGATGCAGCCAAATGGTCTTGCAAGAAGGGGTGATTCCAGGATTGGTGTCGATCTCTGTCAACGGGACGGTCAGAGGAAGGGAGAAGGCCCAAAAACTTTTGATGTTGTTCCGGGAGCAAAGGCAACAAGAGCAACCGCCCACGGAATGGGGCAAGAGTGGAGAAAATTCCATTTCGCCCTCACAAACAAAGCCGCTCTCCAAATCGATGTCAAGAAGAAGAATGGGGAAAGCTTGGAGCTTTTTGTGGAAGAGCAAAAGTCATTCAGTTTACCACTGGTGA 2658 43.19 MFLEREYFIFPVERDIAGKNYIFGFFSLPLYSGFSFTVALLLSSPAYLHALLPLFHDGPISILCSHPLLHFSVSICLVLAIPISQEKMCGVYDFSLNRDYTLCLRIYISYSIFAFAMQMTRSPSLIMDIIEIEENLFAVSDAKLHGQMCKILSATYCKVLSIFPSLEAAKPRSKSGIQALCSLHVAMEKTKNILQHCSECSKLYLAITRESVLSKFEKARFCLTDSLKRVEDIVPQSVGFQIQEIICELESIEFSLDPLEKQVGNDLIMLLQQERKLSDSIENNELESFHQAALRLGIISSRTALIERRALKKLVEKARTEEDKRKESIVGYLLHLMRKYSKLFRNEFFDENDSPGSTPCSPEEISPGCINQSFERQLQKHSSINFKPGNKKSGQMTIPPEELRCPISLHLMYDPVIIASGQTYERSCIEKWFNDGHSSCPKTQQKLSHLSLTPNYCVKSLIASWCEQNGVPLPDAPPESLDLNYWRLPLSECESVNSRSMDSLSSCKLKEVKVVPLEESGIVAETEGNASDLLSAEKKESDLNIFDKFEYFLTVLNEGEDLKKKCMVVEQIRFLLKDDEESRTLMGAKGFVQALLKFLQLAVKEGNSKAQESGAMALFNLAVNNCRNKEIMLKAGVISLLEQMILNSDSHEYATALYLNLSCLEDAKPIIGLSCAVPFLCHLLQTNAKPLCKLDALHALYNLSTLPSNIANLLSAGVITGLQSLLADPGDHGWTEKAIAVLIHLALTQSGKDEMRSTSGLISALGRILDSDEAMEQEQSASCLLILCDGNERCSQMVLQEGVIPGLVSISVNGTVRGREKAQKLLMLFREQRQQEQPPTEWGKSGENSISPSQTKPLSKSMSRRRMGKAWSFLWKSKSHSVYHW 885
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 40439448 40443444 - BLOR21981 Blo16g01194 72385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo16g01194 885 PANTHER U BOX DOMAIN-CONTAINING 127 840 - -
Blo16g01194 885 Gene3D - 550 671 IPR011989 -
Blo16g01194 885 SMART Ubox_2 402 465 IPR003613 GO:0004842|GO:0016567
Blo16g01194 885 MobiDBLite consensus disorder prediction 832 863 - -
Blo16g01194 885 CDD RING-Ubox_PUB 403 445 IPR045210 -
Blo16g01194 885 Pfam U-box domain 400 469 IPR003613 GO:0004842|GO:0016567
Blo16g01194 885 Gene3D - 672 831 IPR011989 -
Blo16g01194 885 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 397 472 IPR013083 -
Blo16g01194 885 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 127 840 - -
Blo16g01194 885 SUPERFAMILY ARM repeat 548 831 IPR016024 -
Blo16g01194 885 ProSiteProfiles U-box domain profile. 398 472 IPR003613 GO:0004842|GO:0016567
Blo16g01194 885 SMART arm_5 664 705 IPR000225 GO:0005515
Blo16g01194 885 SMART arm_5 579 623 IPR000225 GO:0005515
Blo16g01194 885 SMART arm_5 624 663 IPR000225 GO:0005515
Blo16g01194 885 SMART arm_5 748 789 IPR000225 GO:0005515
Blo16g01194 885 MobiDBLite consensus disorder prediction 833 861 - -
Blo16g01194 885 SUPERFAMILY RING/U-box 394 475 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g00829 Blo16g01194 CCT
Blo01g00365 Blo16g01194 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00365 Blo-Chr1:4283069 Blo16g01194 Blo-Chr16:40439448 0 dispersed
Blo06g00829 Blo-Chr6:31531339 Blo16g01194 Blo-Chr16:40439448 0 dispersed
Blo16g00047 Blo-Chr16:1887921 Blo16g01194 Blo-Chr16:40439448 4.71E-77 dispersed
Blo16g01194 Blo-Chr16:40439448 Blo03g01130 Blo-Chr3:37761378 1.61E-60 dispersed
Blo16g01191 Blo-Chr16:40421873 Blo16g01194 Blo-Chr16:40439448 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo16g01194 - - jre:109019801 1063.91