Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00002 ATGTGCATATTGCTGCAGTTTCCGCTCTTATCCAAGAGCAATTATTTGCAAAGATTAGTGTCAAAAGCCAACGACGAAGATGTCGAAGAACTTCAGATAGTTGATTTTCCAGGTGGCCCAAAAGCTTTTGAAATCTGTGCAAAATTCTGCTATGGAATGGCTGTCACTCTTAATGCTTATAACGTTGTGGCTGCTCGATGTGCGGCCGAGTACCTTGAGATGACGGAAGATGTTGAAAAGGGAAACTTAATATTTAAAATTGAGGTGTTTCTAAACTCGAGTATATTTCGAAGCTGGAAAGATTCTATCGTAGTTCTTCAAACAGCCAGATCTGTTCTTCCTTGGTCTGAAGATCTGAAGATTGTTGGCAGATGCGTGGACTCCATTGCCTCGAAAACATCTGTAGATCCAGCGAATGTCACTTGGTCATACACACGGAACCGGAAGCTATCAGAGCCGGACAGAATTATTGAAGATGGGATCAACTCTGAGGAAAAGATTGAATCCATTCCGAGAGATTGGTGGGTTGAAGATATATGTGAGCTGGAGATTGATCTGTATAGACGAGTCATGATTGCAGTGAAATCAAAAGGAAGAATGGATGGTGGTGTTATTGGGGAGGCATTAAAAACTTATGCCATCAGATGGTTACCAGATACAGTTGATGCTTTGGTTTCTGATGTTCATGCCAACAGAAACAAGTCTCTGGTGGAAACTATAATTTGCTTATTGCCGGCGGACAAGGGTATTGGTTGCTCCTGTGGCTTCTTGCTGAAACTCATGAAGGTGTCTATGTTGGTCGGAGCTGACGAGTCACTAAAGGAAGATTTGGTGAGGAGGGTTAGCCTGAAGTTGCACGAGGCTTCGGTCAGAGATATATTGATCCCGGCACTTCCCCCAAAGGTCACGAGATATGACGAAGAGTTAGTTCAAAGCATGGTGATCCTATATTTAGAGCACAACAAATGTAATTGGGATTTAGATGCCTTGGAGAAGAAAGGGAAAGGATCGGATAATTTTCTGCTCGGGCATTGGCCATTGTTGAATGTTGGAAAATTGGTAGATGGGTATCTCGGAGAAATTGCGCATGACCCTAACCTTTCACTATCGAGTTTTATTGTGTTGTCGCAGTCAATCCCAGACTCGGCAAGGCCAATTCATGATGGGTTGTATAAAGCTATTGATCTGTACCTTAAGGGGCACCTGAATCTGACCAAGGCTGAGAGGAAGAAGATATGTGGATTGATTGACGTAAAGAAACTGACAATGGAGGCGTCCATGCATGCGGCACAGAATGAAAGACTTCCTCTCAGAGTTGTAGTCCAAGTTCTATTTTTTGAACAGGTTAGAGCATCTACTGTCGAACAAGCCCCGAATTCTTCACGACCGACAAACAATGATGACCCATGCGAGAAATCATTGGAAAGCTGTAAATTTCTGACGCAGCAGACCAATCAAATGAAACTGAACGACGATGCAAGGAAAAACGGAAAATTAGGAAAAAAGAAGAGCAGAAGCGGAATACAATTATTGCCTTCCCGATCAAGGAGAATTTTTGACAAGTTATGGAGTGTAGGGGCTGTTTTTGATGACGATGAAACCGTTCTTGCGAATGGTACCGGCTTGCTGAGGGTAGGTCTTGGAGTCACCGGCGTCGGCTTTGGATTCGAAGTGATGCTCCTTGTCAGACACGAGGGAAAAGGGTTGAGGCGTAACAGTCTCTGGGGGAAGCCACCGGACGGGCTCTTGGAGATTGCCGAAAGGGTCTACGTGTTCGATTGCTGCTTTACAACCAATGTTTTGGAAGACGATGAATATAAAGTTTACATAGGAGGCATAGCTAATCAAGTGAGAGGGCATCTCCCTGATGCTTCATTCATGGTGTTTAACTTTCGAGAAGGAGAGAAACAAAGCCTGATTTCTAAGATATTGTCTGACTATGACATGACCGTGATGGACTACCCTCGCCATTACGAAGGTTGTCCCCTTCTTACAATGGAGATGATCCATCACTTCTTGAGATCCAGTGAAAGCTGGCTCTCCCTTGGGCAACAAAATGTGCTCTTAATGCACTGTGAACGAGGCGGGTGGCCTGTCTTGGCTTTCATGTTGGCTGCTCTCTTAATCTATAGGAAGCAGTATGTTGGTGAACAAAAAACTTTGGATATGATTTACAAACAGGCACCTCCAGAGCTTTTGCTTCTAATGTCTCCCCTCAACCCCATGCCATCACAGTTGAGGTACCTTCAATATATCTCGAGAAGAAATGTTGCCTCGGAATGGCCTCCGCTGGATAGAGCCCTTACATTGGACTGCATCATCATTAGATTCATTCCTAATATGGATGGAGAAGGTGGTTGTCGTCCTATATTTAGAATATATGGACAGGATCCCTTTATGGCTTCTGATAGAACTCCCAAAGTTCTTTTCTCAACTCCAAAAAGGAGCAAATTCGTTCGATACCACAAGCAGGAAGATTGCGAGCTAGTTAAAATTGATATTCACTGCCATATACAAGGTGATGTAGTCCTTGAATGTATTAGTTTAGACAATGATTTGGAACATGAAGAGATAATGTTCCGAGTCATGTTCAATACGGCTTTTATAAGGTCGAATATTTTGATGTTTAGTCGGGATGACATTGATATTTTATGGAATGCTAAGGATCAGTTCCCCAAGGATTTCAGAGCAGAGGTTCTTTTCTCGGAGATGGATGCTGAGACTTCTCTTATTTCAGTTGATTTGCCGAATATTGAGGAGAAAGAGGGCCTCCCAATCGAAGCATTTAATAAAGTTCAAGAGATATTTAGCAACATGAATTGGATAGATCCAAAAACACAGCAAATCTCATCACCAAAAACCCCTGAAGGAAACATGGTTGAAGAAACAGGAAACTATGCAGGTCCTGAAGAACTAAAAGCAGAACCAAAATCAGCAGAGGATGACTTACAAGTTTGCTCTCTCAATGACCAGAAAGATCAATCTATACCATGTTCTAAACCATCGTCAGCTGAAGACTCGGCTGGAATGACGATCCAAAGATCCTCTAGGTCTAAGGTCATATCTTTTTCTGCACCAGCTTCTTTTAGTAATTCCTTGCAAGGGTCACCCGCTTCCATATCCAGATATCATAGTGCACCCTCAGCCCTTGGCATTACAGCTCTGTTGCGTGACCATGCAACATCGGACTCTTGCCAAGTTATTAGTCCAGAAGCAGTATTGCCATCTTCTTCTTCTATCTCACCATCTCTTGCTAATGTATTTAAGCCTTTGGAGCCGATAATTGTTCGTATTCCGCCATCTCCACTGCTTACTCCTCCCCAAGAACCATTTCAGCCAAAACCTTCAGATGAAACTCAACCTTCAGAGAGATTAGCTCCCATCCCCTCTCCACCTCGACCACCTTTAGCCGGATTGAGTAACTCTTTATCAACGCCTCCTCCTCCACCCCCTAGTGTACTTTCAGGACCATTTTCTGTTTCTTCAACGATGCCTAATACGAGTAACTCTTTAGCAACTCCACCTCCTCCTCCTCCTCCTCCTCCTCCACCCTCTAGTGTACCTTCTGGACCATTTTCTGTTTCTTCAAGGATGCCTAGAGTGAGTAACTCTCTAGCAACGCCTTCTCCTCCTCCTCCTCCTCCACCTCCTAGAGTGAGTAACTCTCTAGCAACGCCTCCTCCTCCTCTTCCACCCGCTAGTGTACCCCTTTCCCCGCCACTACCTCCTCCTCCGTCTAATCTCAATTCAAAAGAATCAACATCAAATAATCATGCACGGACATCTCCTATCCCACCACCTCCAGCTCCTTTGCCCAATGGTTTAACAAAAGCTGGCGATGCATCTTCAAATTCTAGAAATACTAATAGCAAAATACCTGCAATTCCTGGGCCCCCTTCTAGTCTTTCATTCAATTCAAAAGGTCGAGCCCCACCACGTACAGGTGCCAAAAATCCGGCTCAAGGTAAAAAATCAAACCTGAAACCCTATCACTGGTTGAAGTTAACAAGGGCTGTGCAAGGAAGTTTATGGGCAGAGGCACAAAGAGCTGATGAAGTTTCTAAGCCTCCAGAGTTTGATATGTCAGAACTTGAGTCTCTTTTTGCTGCTACTGCTCCAAATTCAGATAATGGGAGAATTGGCGACAAGTCAAAACGCCATTCATCAGCAAATAAAGCAGACAAAGTGCAGTTGATTGAGCTGAGGCGGGCCAATAATTGTGAGATCATGCTTACTAAGGTTAAGATTCCATTGCCTGATTTGATGAGTTCAGTTCTTGCCTTGGATGAAGCAGCATTGGATGCCGATCAAATCGAGAATCTCATCAAGTTTTGTCCGACGAAGGAAGAGATGGAGCTACTCAAGGGTTATGGTGGAGATAAAGAAAATTTGGGAAAATGCGAACAGTTCTTCTTAGAATTGATGAAAATACCGCGTGTAGAGCCGAAGCTAAGAGTATTTTCTTTCAAGATTCAGTTTAGATCCCAGGTTTCTGACCTTAGAACTAATCTAAACACTGTAAATTCTGCATCTGAAGAGGCAAGATTCATTGTGGGAAAAAAAATCATGGATTTAGGTTCGGCCGTTGGATTTCGTTTGGATAGTCTTCTTAAACTTACTGACACTCGAGCCCGGAACAACAGAATGACTCTTATGCACTATCTCTGTAAGGTCCTCGCCGAGAAATTGCCTGAACTTCTAGATTTTCCAAAAGATCTAATGAATTTGGAGGCGTCGACGAAGATACAGTTGAAGTATTTAGCGGAGGAAATGCAAGCCATTAGTAAGGGGATTGAGAAGGTTGTGCAGGAATTAACTTCTTCAGATAATGATGGTCCAGTTTCAGAAAATTTTTCCAAGACGGTAAAGGGTTTTCTTAGTGATGCCGAGGCCGAAGTGAGGTCTCTAGCTTCGCTCTATTCTACCGTGGGAAGAAATGCAGATGCATTGGCTTTCTATTTTGGTGAAGATCCAGCGCGCTGTCCATTTGAACAAGTTGTATCCACGTTGCTCAACTTTGTTAAAATGTTCAGTCGAGCACATGAGGAAAACTGCAAGCAGATAGAATATGAAAAGAAGAAAGCACAGAAGGAAGCAGAAAATGAGAAGATGAAGATAGGTTCCCCAAGAAAGGCAGCCTCTGACCACTCTCTTTCTTCGCCGATGAAGAATCGAGGCATTACATGA 5187 43.49 MCILLQFPLLSKSNYLQRLVSKANDEDVEELQIVDFPGGPKAFEICAKFCYGMAVTLNAYNVVAARCAAEYLEMTEDVEKGNLIFKIEVFLNSSIFRSWKDSIVVLQTARSVLPWSEDLKIVGRCVDSIASKTSVDPANVTWSYTRNRKLSEPDRIIEDGINSEEKIESIPRDWWVEDICELEIDLYRRVMIAVKSKGRMDGGVIGEALKTYAIRWLPDTVDALVSDVHANRNKSLVETIICLLPADKGIGCSCGFLLKLMKVSMLVGADESLKEDLVRRVSLKLHEASVRDILIPALPPKVTRYDEELVQSMVILYLEHNKCNWDLDALEKKGKGSDNFLLGHWPLLNVGKLVDGYLGEIAHDPNLSLSSFIVLSQSIPDSARPIHDGLYKAIDLYLKGHLNLTKAERKKICGLIDVKKLTMEASMHAAQNERLPLRVVVQVLFFEQVRASTVEQAPNSSRPTNNDDPCEKSLESCKFLTQQTNQMKLNDDARKNGKLGKKKSRSGIQLLPSRSRRIFDKLWSVGAVFDDDETVLANGTGLLRVGLGVTGVGFGFEVMLLVRHEGKGLRRNSLWGKPPDGLLEIAERVYVFDCCFTTNVLEDDEYKVYIGGIANQVRGHLPDASFMVFNFREGEKQSLISKILSDYDMTVMDYPRHYEGCPLLTMEMIHHFLRSSESWLSLGQQNVLLMHCERGGWPVLAFMLAALLIYRKQYVGEQKTLDMIYKQAPPELLLLMSPLNPMPSQLRYLQYISRRNVASEWPPLDRALTLDCIIIRFIPNMDGEGGCRPIFRIYGQDPFMASDRTPKVLFSTPKRSKFVRYHKQEDCELVKIDIHCHIQGDVVLECISLDNDLEHEEIMFRVMFNTAFIRSNILMFSRDDIDILWNAKDQFPKDFRAEVLFSEMDAETSLISVDLPNIEEKEGLPIEAFNKVQEIFSNMNWIDPKTQQISSPKTPEGNMVEETGNYAGPEELKAEPKSAEDDLQVCSLNDQKDQSIPCSKPSSAEDSAGMTIQRSSRSKVISFSAPASFSNSLQGSPASISRYHSAPSALGITALLRDHATSDSCQVISPEAVLPSSSSISPSLANVFKPLEPIIVRIPPSPLLTPPQEPFQPKPSDETQPSERLAPIPSPPRPPLAGLSNSLSTPPPPPPSVLSGPFSVSSTMPNTSNSLATPPPPPPPPPPPSSVPSGPFSVSSRMPRVSNSLATPSPPPPPPPPRVSNSLATPPPPLPPASVPLSPPLPPPPSNLNSKESTSNNHARTSPIPPPPAPLPNGLTKAGDASSNSRNTNSKIPAIPGPPSSLSFNSKGRAPPRTGAKNPAQGKKSNLKPYHWLKLTRAVQGSLWAEAQRADEVSKPPEFDMSELESLFAATAPNSDNGRIGDKSKRHSSANKADKVQLIELRRANNCEIMLTKVKIPLPDLMSSVLALDEAALDADQIENLIKFCPTKEEMELLKGYGGDKENLGKCEQFFLELMKIPRVEPKLRVFSFKIQFRSQVSDLRTNLNTVNSASEEARFIVGKKIMDLGSAVGFRLDSLLKLTDTRARNNRMTLMHYLCKVLAEKLPELLDFPKDLMNLEASTKIQLKYLAEEMQAISKGIEKVVQELTSSDNDGPVSENFSKTVKGFLSDAEAEVRSLASLYSTVGRNADALAFYFGEDPARCPFEQVVSTLLNFVKMFSRAHEENCKQIEYEKKKAQKEAENEKMKIGSPRKAASDHSLSSPMKNRGIT 1728
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 13808 24870 + BLOR15823 Blo17g00002 72390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00002 1728 MobiDBLite consensus disorder prediction 1125 1155 - -
Blo17g00002 1728 MobiDBLite consensus disorder prediction 991 1013 - -
Blo17g00002 1728 MobiDBLite consensus disorder prediction 1099 1114 - -
Blo17g00002 1728 ProSiteProfiles NPH3 domain profile. 173 450 IPR027356 -
Blo17g00002 1728 Gene3D - 762 906 - -
Blo17g00002 1728 Gene3D Formin, FH2 domain 1336 1516 IPR042201 -
Blo17g00002 1728 Gene3D Formin, FH2 domain 1519 1713 IPR042201 -
Blo17g00002 1728 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 767 904 IPR035892 -
Blo17g00002 1728 SUPERFAMILY POZ domain 7 77 IPR011333 -
Blo17g00002 1728 MobiDBLite consensus disorder prediction 1190 1204 - -
Blo17g00002 1728 Coils Coil 1678 1705 - -
Blo17g00002 1728 MobiDBLite consensus disorder prediction 1277 1308 - -
Blo17g00002 1728 ProSiteProfiles C2 tensin-type domain profile. 765 904 IPR014020 -
Blo17g00002 1728 Pfam NPH3 family 173 426 IPR027356 -
Blo17g00002 1728 SMART PTEN_C2_2 763 903 IPR014020 -
Blo17g00002 1728 Gene3D Protein tyrosine phosphatase superfamily 579 757 IPR029021 -
Blo17g00002 1728 MobiDBLite consensus disorder prediction 1205 1247 - -
Blo17g00002 1728 Pfam Formin Homology 2 Domain 1526 1678 IPR015425 -
Blo17g00002 1728 Pfam Formin Homology 2 Domain 1321 1515 IPR015425 -
Blo17g00002 1728 SMART it6_source 1317 1722 IPR015425 -
Blo17g00002 1728 MobiDBLite consensus disorder prediction 943 958 - -
Blo17g00002 1728 PANTHER FORMIN-J 574 1715 - -
Blo17g00002 1728 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1330 1697 - -
Blo17g00002 1728 MobiDBLite consensus disorder prediction 1372 1391 - -
Blo17g00002 1728 MobiDBLite consensus disorder prediction 1693 1728 - -
Blo17g00002 1728 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1317 1703 IPR015425 -
Blo17g00002 1728 MobiDBLite consensus disorder prediction 1170 1189 - -
Blo17g00002 1728 MobiDBLite consensus disorder prediction 1713 1728 - -
Blo17g00002 1728 MobiDBLite consensus disorder prediction 943 964 - -
Blo17g00002 1728 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 581 753 IPR029021 -
Blo17g00002 1728 MobiDBLite consensus disorder prediction 1693 1710 - -
Blo17g00002 1728 Pfam C2 domain of PTEN tumour-suppressor protein 766 903 IPR014020 -
Blo17g00002 1728 MobiDBLite consensus disorder prediction 1099 1329 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00074 Blo-Chr3:2640610 Blo17g00002 Blo-Chr17:13808 9.73E-147 dispersed
Blo04g00779 Blo-Chr4:7722084 Blo17g00002 Blo-Chr17:13808 4.93E-59 dispersed
Blo05g00838 Blo-Chr5:30274994 Blo17g00002 Blo-Chr17:13808 5.68E-143 dispersed
Blo06g00849 Blo-Chr6:31730097 Blo17g00002 Blo-Chr17:13808 4.46E-126 dispersed
Blo08g00524 Blo-Chr8:14804557 Blo17g00002 Blo-Chr17:13808 1.61E-129 dispersed
Blo16g01173 Blo-Chr16:40277883 Blo17g00002 Blo-Chr17:13808 9.98E-118 dispersed
Blo17g00002 Blo-Chr17:13808 Blo04g00781 Blo-Chr4:7742880 1.42E-92 dispersed
Blo19g00154 Blo-Chr19:5953106 Blo17g00002 Blo-Chr17:13808 2.89E-60 transposed
Blo12g01054 Blo-Chr12:28328199 Blo17g00002 Blo-Chr17:13808 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00002 - - vvi:100249142 1361.28