Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00025 ATGCAAGGGCAAGCTACTACTTCTGTCGCCGCTAGTTCTTTGCCTTCCAGCAGTGATAGATCGTCCAGCTCTGCTCTTCATCTCGACGTGAAAGAAGGTATGGAGAGCGATGAGGAGATCAGGAGAGTGCCGGAGTTAGGCGGAGAATCCGCTGGAACTTCAGCATCAGGCAGAGATATTGGTTCCGGGGCCGGTTCTGAGCTGGTTCGAGTTGCACGGGAAGGTCAAAGAAAGAGGGGAAGAAGCCCAGCTGACAGAGAAAGTAAAAGACTTAAAAGATTGTTGAGAAACAGAGTCTCAGCACAGCAAGCAAGGGAGAGGAAGAAGGCGTACTTGAGTGACTTGGAAACTCGGACCAAAGAGGTGGAGAAAAAGAACTCGGAGCTGGAAGAGAGGCTCTCCACTTTACAGAACGAGAATCAGATGCTTAGACAGGTA 438 50.23 MQGQATTSVAASSLPSSSDRSSSSALHLDVKEGMESDEEIRRVPELGGESAGTSASGRDIGSGAGSELVRVAREGQRKRGRSPADRESKRLKRLLRNRVSAQQARERKKAYLSDLETRTKEVEKKNSELEERLSTLQNENQMLRQV 146
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 136851 137606 - BLOR15846 Blo17g00025 72413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00025 146 Coils Coil 112 146 - -
Blo17g00025 146 CDD bZIP_HY5-like 90 141 - -
Blo17g00025 146 Gene3D Single helix bin 108 146 - -
Blo17g00025 146 MobiDBLite consensus disorder prediction 30 45 - -
Blo17g00025 146 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 1 146 IPR044280 GO:0000981|GO:0045944
Blo17g00025 146 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 1 146 - -
Blo17g00025 146 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 146 IPR004827 GO:0003700|GO:0006355
Blo17g00025 146 SMART brlzneu 85 146 IPR004827 GO:0003700|GO:0006355
Blo17g00025 146 Coils Coil 84 104 - -
Blo17g00025 146 Pfam bZIP transcription factor 86 145 IPR004827 GO:0003700|GO:0006355
Blo17g00025 146 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 92 107 IPR004827 GO:0003700|GO:0006355
Blo17g00025 146 MobiDBLite consensus disorder prediction 71 109 - -
Blo17g00025 146 MobiDBLite consensus disorder prediction 1 109 - -
Blo17g00025 146 MobiDBLite consensus disorder prediction 1 24 - -
Blo17g00025 146 SUPERFAMILY Leucine zipper domain 89 145 IPR046347 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo17g00025 Blo18g00033 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00025 Blo-Chr17:136851 Blo11g00114 Blo-Chr11:862509 8.23E-07 dispersed
Blo17g00025 Blo-Chr17:136851 Blo18g00033 Blo-Chr18:224771 1.72E-78 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13479 PF00170 bZIP_1 1.00E-12 CL0018 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00025 K16241 - csv:101218051 221.476