Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00030 ATGGAAGGCAGAAAAGACTGTAATATTGACAATGGGAGCTGCTCCAAGGAGGGTCTGCCTCCGAATCCTATTGCGGCGGCTTATCGGCAATGTCTTACCACCGATGGTGCTCTAATACCGTGTAAGAAATCACTCGTACGCCACCAATCTCTGATGAAGACCAAGGCGTTGGAAGTCCCTGACGAACCTGAATTTAACAAAGATGACCTTGACTCTAACTTTATTCCAATTGTTCGATCCGGAGCATCCACCAACGTCGGGTGTCGTAGCAGCATGGAAGATGCATATGTTTGCATCGACAACTTCACGAGTGAAGATGGGGTTGAAAATTCTAACGATGGGCCTAGTGCTTTTTATGGGGTTTTTGATGGGCATGGAGGAAAGCATGCTGCCGAATTTGCTCGTTGCTATTTACCAAAATTTATAGTCGAGGATGAAGGTTTCCCTACGGATATCGAGAGGGTTATTGCTTCAGCATTTCGACAAACGGATGCAGCCTTTGAAGAAGCCTGTTCCTCCGATGCAGCCCTTGCATCTGGCACAACAGCTTTGGCTGCACTTGTCCTAGGAAGGTCATTGGTTGTAGCAAATGCTGGAGACTGCCGAGCGGTGCTGAGTCGCCGTGGCAAAGCCATCGAAATGTCAAGGGACCACAAACCCATTTGCATCAGAGAGCGGGCACGCATCGAGGCATCCGGAGGATATATTTACGATGGTTATCTTAACGGACAGCTTAACGTGGCCCGAGCATTGGGAGACTGGCACATGGAAGGAATGAAGGGTCAAGAAGGCGGGCCTCTAAGTGCCAAGCCTGAGGTCACGTCGATAAAACTAACGGAGGAAGACGAGTTTCTTGTAATGGGATGCGACGGAATCTGGGATGTATTCAGGAGCCAAAATGCCGTCGATTTTGCCAGACGGAGGCTGCAAGAGCATAACGACCCGGCCCTGTGCAGCAAGGATTTGGTTGAGGAGGCTTTGAAGAGAAAGAGTGGGGATAATTTGGCGGCGGTTGTGGTCTGTTTCCAGCGGCGTCCTCCTCCCAATTTGGCTACTCTGAGAAGTAGAGTGCGGAGGAGCTTTTCAGCTCAGGGGTTGGGGGAGTTGCAAAGCTTTCTGGATAGCTTGAAGGAAAATTGA 1140 49.91 MEGRKDCNIDNGSCSKEGLPPNPIAAAYRQCLTTDGALIPCKKSLVRHQSLMKTKALEVPDEPEFNKDDLDSNFIPIVRSGASTNVGCRSSMEDAYVCIDNFTSEDGVENSNDGPSAFYGVFDGHGGKHAAEFARCYLPKFIVEDEGFPTDIERVIASAFRQTDAAFEEACSSDAALASGTTALAALVLGRSLVVANAGDCRAVLSRRGKAIEMSRDHKPICIRERARIEASGGYIYDGYLNGQLNVARALGDWHMEGMKGQEGGPLSAKPEVTSIKLTEEDEFLVMGCDGIWDVFRSQNAVDFARRRLQEHNDPALCSKDLVEEALKRKSGDNLAAVVVCFQRRPPPNLATLRSRVRRSFSAQGLGELQSFLDSLKEN 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 170237 171976 - BLOR15851 Blo17g00030 72418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00030 379 SUPERFAMILY PP2C-like 72 343 IPR036457 -
Blo17g00030 379 CDD PP2Cc 78 342 IPR001932 -
Blo17g00030 379 Gene3D - 57 346 IPR036457 -
Blo17g00030 379 PANTHER PROTEIN PHOSPHATASE 2C 67 363 IPR015655 GO:0004722|GO:0006470
Blo17g00030 379 SMART PP2C_4 69 340 IPR001932 -
Blo17g00030 379 ProSiteProfiles PPM-type phosphatase domain profile. 79 342 IPR001932 -
Blo17g00030 379 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 67 363 - -
Blo17g00030 379 SMART PP2C_SIG_2 94 342 IPR001932 -
Blo17g00030 379 Pfam Protein phosphatase 2C 80 334 IPR001932 -
Blo17g00030 379 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00030 Blo-Chr17:170237 Blo05g00222 Blo-Chr5:2398927 3.63E-79 dispersed
Blo12g01046 Blo-Chr12:28294284 Blo17g00030 Blo-Chr17:170237 5.79E-44 transposed
Blo15g00061 Blo-Chr15:489600 Blo17g00030 Blo-Chr17:170237 9.85E-40 transposed
Blo17g00030 Blo-Chr17:170237 Blo18g00040 Blo-Chr18:265747 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00030 K14803 - zju:107421256 553.903