Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00036 ATGGATGTTCCCCCCCTGGAACAAAGTGAAACGGAAACTTACCCTTTATTAATGGAAAGATCAGAAAATCTTAACAATAGTGAGCATATTGTTGATATATCGGAAACTGTTGATACTTCATCATCAAGCTTATCTCATGGTAGATTATACACTGGGTCAAATGCTTCACAGATTGAAGATCGATCTTCAAGTATTACCCGAGTTCCTACTTCTCAAGCTTCAGTTGCATCTAATGGATCTAACTCAAGAAATTCCTCGCTCATTCGAAGAGGGGACACACGTCGCCGTCGGAGTCCACTGAATTCCAGATTATGGATATCTATCGAACTCATTATTACTTTAAGTCAGATTGTTGCAGCTGTTGTTGTTTTGTCACTTTCAAGGCAGGAGCATCCGCGAGCCCCATTGTTTGGGTGGATTGTGGGATATGCATCTGGTTGTGTTGCTAGCCTCCCTCTTCTCTACTGGCGCTATAGACATCATAATCAGACTTCAGAGCAAGATTCATCTCAATCCCGTCAGAGTTCTACTCAAGTTTCTCTTTCAGCTTCTAGGACATCAGAAGGGGAAGATCAACAAACCACTGTTTCTCCTCCTAGAGGCAACCAAGGTTCTGGTGTACTAAGTCTGAGGCTGAAGATAATGGTAGAATATTTTAAGATGGGCTTGGATTGTTTTTTTGCCATTTGGTTTGTAGTTGGCAATGTGTGGATCTTTGGTGGGCATTCATCAGCCTCTGAGTCTCCTAACTTGTACAGGTTATGTATAGTTTTTCTTACCTTTAGCTGTATTGGATATGCCATGCCCTTTATTCTCTGTGTGACCATCTGCTGCTGTCTGCCGTGTATAATTTCCATCCTTGGGTTTAGAGAAGATCTGTCACAAACTAGGGGTGCCACTGCTGAATCAATTAATGCTTTGCCTACATACAAGTTTAAAGTGAAGAGAAGTAGAAGTGTGGATGGAAGTAACTTAGGTGTTTTTGAAGGTGGGGTTGTGGCTGCTGGAACTGATAAGGAGCGCATGATTTCTGGAGAAGACGCACGTCTTCGATTCGAATTCACCGGTGATGGGTTGTCCAGTCGATGCGTCGGTGGGATTTCTGTGAGGCTGTCGAAGGAATCGTTTCACCGTGAGTATAGACGTCGCTGTGGTTTTGTTGTGAACATAATGAAAGGTGCTGTATTTATGCATACGATTCCGGATTACTCATCATCAGCCATGCAAATAGACCTGATTGACCCAATGCCCAATGATCTTCATTCTCAAAGTTTATTCTTATCAAGCATGCCAATGCGACAACTAGACGGATTACAGAAATTTCTAATTCCTAGTCAACCTAGAGGAATGGAATACATGCCAAGTAATATGGGGCTTAAGACATCATCTTTACCAGTCAAAAGGAAGGCCCCAATGGATATATTGGCCTCTGTATCAAAACAATCTTCAATATTTAGCAGGCCTGATGCTGAAATGGAGCATAGGCCATGGTTGCACCAAGTTTCTCCACCAAATAAAAGATTTGCCCACCTGCTATCGCTGCCTCCAGGCCCTGTAATACCACAGTCACGTCGGACACAGCGATCATCGACTCCTAGGAATCATGCTGTAATAATAAACAACTCTCCCAAGTTTCAAAACGAGCCTTATGATTCAGTGATACAGCGATCATCAACTCCTCGGAATCACGCTGTAATAATAAATAACTCTCCCAAGTTTCAAAATGCGCCTTATGATTCAGTGAGGTCCAAAATGAGGGATTCGTTATCTGCAGCTCTAGCCTTGGTCTCTCAGAAGCAAGATACTACTATAAATGAAGGTAAAAATTCAATAACTGAAACTGAAAAAACTGTGGAGCAGCAGGATAATATCAATACAGCTTCTGTTGAGGTTGATCCTGATGGGATTATGTCTGGAAAAGTTAACGAAGCCCCATTCCCAAAAGAAAAATCTTCTCCTGATAAAAATAAGGATGAAAATACATCACAGAAGGTTTTTGAGGGCCTTAATGAGACATTGGGGTATGATAGGCTGCAATTCCAAACCAGCAATATTTTGCCTTACGAGGAAATTTCTTTTGATGATAATTTCTTCTCAAAAGATGAACTTTTGCAGGGTAATGGTCTTTCATGGGTTCTAGACTCTGAAATGCAGATGGCTGAGAGGAATGAAATTCAGTTAGTAGGAAAGCAGAAACTAGAGGAAGTGGATGTAGTTGAGGAAGAAAAGAAAGTAGAGTCTCCTGGAACTTTGGCTACTAAAATTGAAATGGAATTATTTAACTTATTTGGAGGAGTGAATAAAAAATATAAGGAGAAAGGGAGATCACTTTTGTTTAACTTAAAAGATCCTAATAACCCGGAACTGAGGGAGAGGGTTATGTATGGGGACATTACCCCAGAAAGACTTTGTTCTATGAGTGTAGAAGAACTTGCTTCAAAGGAGCTTTCTCAATGGCGGATGGCAAAGGCAGAAGAGCTTGCGCAGATGGTGGTTTTGCCTGAGTCAGAAGTTGATATCAGGCGTTTGGTTAAAAAAACACACAAGGGTGAGTTTCAAGTTGAAGTTGAAGAGAGTGACAATGTTCCCATAGAGGTTTCAGCTGGTGCTAGTGCGTTTGCTATTAGTGAATCAAATAATAGTGGGACAGAAGGTCCCTCTCCCGATAAAGATGAATTGAACACTGTTAGCACAAAATACAATCTAGAAAACAAGGATGTACCATATGAGCTTGCACTTCAACCCAATGAGGGAACTGACTTAATGCAAGGTTTAATTGTGGATGATTCATTGAAGGACGCTGAATTTCTTCCCCCAATAATATCCCTTGACGAGTTTATGCTCTCTCTTCAATCTGAGCCCCCATTCGAAAATTTATCTTCTGCTACCAAAAAATCAGGCGACATTGAGCTTGGCTCCGATTCAAAGTCTTCTAGTCTATTACCAAAATATCCTGCTAATAAAACACCAGAAAAAAATGAAAAAACTGATGAAGCTCGCATTGAATCAGATGCTGATGTAAAGTCTGTTGATGATCATTCCAATTTGAGATCTAATGATAATCATGCTGGTGGTAAGTCCAGTGTGGGTGATGCTGATTTTAGATCCAGGGGTAATGATATTGATTTGAAAATTGATGACAATGATGTGAAATCAGAGAAAACATCCCCGCTCAACATGCCAAAAGTTGAATACTTGTGGAGAGGTTTACTACAATTGAATACCTCTTCCACAATCTCTATTGCCGGCGTCTTTAAAGGTGGAGAGAAGGCAAGTGCAAAAGAGTGGCCCGGCTCCCTTGAAATCAAAGGAAGAGTTAGAGTGGACGCATTTGAAAAGTTCCTTCGTGGCCTTCCTCTGTCCCGAAGTCGTGCTTTCATGGTGGCTCATTTCGATCTGAAGGAGACCTCTTCGGAGAATGAACGAGCAAATCTTGTTGAGGTCGTGGATTCGTATGTTTCGGATCAAAGAGTGGGTTTTGCCGAAGTTTCTTCTGGGGTTGAAATCTACTTTTGCCCACCGCGGGAGACAACTCTTGAAATGTTCAACAAGAATCTGCCCAAGAAAATCGTTGAGTGTCTTGATTCCATCGACACTGGCCTTATTGGATTTGTTGTCTGGAAAAAGCCTCACTACGCTTCTACCATTTCACCCAACTCATCCTCCCACCACAAACACTCGTCCAAACGCCAACATTCCAGCTCCAGGAGACACACGGATTCCTCTTTAAATGTTGACTCTCCTAAGCAGAGAATCCCAGCTCCTTCCTTTCCTCGTCCGGATACAAGAACTCAACTTGCTGTTGCTAGTGTTAATGATGATGACAACGAAGATGATCGTGATGTTCCTCCCGGGTTTGGCCCTGGGGCTCCCCGGGAGGACGACGATCTTCCAGAATTTAACTTCTCTGCCTCAGTACCCCAAATTTCTGCCCAAACAACCATTCAGAGATCAAACATGCCTTCGTTTCATCCCTTGTCTCAAACTTCACCTCCACCTGTGGAGAAAATAAGAGAGCTTATACACAAATATGGACAGAGTGAATCTCATGAGTCTTCTGGGAAGTGGACGGATAAGAGAGTTGTTGGGGGTGGAGCACAGTCCTTGAACGATGACGACGATGACGACGATGATATTCCGGAGTGGCAGCCACAAGCACCCCAGTACAAGAGCCATGTGGCGCAGCCACTGCAAGGCTTGGAACCACCAAAGATGAGAATGCACGAACAGCATCTGAGAGCAGCTCAACAGCTTCTCCCGCATCACATATTAGCTCCGGCCAGGTCTTCTGCTGATGAAGATTTGACAATGGATGCAATGGTCGATGATATTAACGCTTATTCTTACACTTACCCGGTTCAGTTGCCGTCTAAGAAATTTTTCTTCAAATGTGCAACTCTGATTGAGTTCCACTCTGCCGGCTGTCTTACTCTCTTTGTCTATTTAAGGGTGGAATCGAGAAAGCCAGAACGATATTCCTCGGCTGCCCCATTATCTCCTGATGCTCGTCTGCGGATTGTGTCAGAGCGGGTTGATATTGTTGATAATCTCATCATTTCTGTTTCGATAGGTCCCCCAAATTCAATGTTTCTAAAATCAACAGACAAGAGCACCTGGGTTGCAAAAGACGTAGCTGATTCCGTTTTAGCTGACAAGTCGGCATTGCGAGTTACGTCCAGTCAACGGATGGCTGAGAGTTCAGTGATTGATGTACATTCTAGCGAAATTGATGGTCAGCCGTATTGGTATTACGAGTACCTTGTTCGTAAGTCACCGACAAAAATTGTTCAAGAATCTGACACGTACCGGCGATATATTGCATCAACAACAGAGCGAGACGGTTATCTCTACTCCCTCAATGCTTCAACTTTAAGCCAGCAATGGAACACAATGGGGCCCATCTTGGAAAAAACGGCGGCGTCTTTCCGGCTTCTTCCTCCGACCGAGAATTACGTGCCTCCATACAAGGATCCATGGAGGTTTTGGTGA 4989 43.03 MDVPPLEQSETETYPLLMERSENLNNSEHIVDISETVDTSSSSLSHGRLYTGSNASQIEDRSSSITRVPTSQASVASNGSNSRNSSLIRRGDTRRRRSPLNSRLWISIELIITLSQIVAAVVVLSLSRQEHPRAPLFGWIVGYASGCVASLPLLYWRYRHHNQTSEQDSSQSRQSSTQVSLSASRTSEGEDQQTTVSPPRGNQGSGVLSLRLKIMVEYFKMGLDCFFAIWFVVGNVWIFGGHSSASESPNLYRLCIVFLTFSCIGYAMPFILCVTICCCLPCIISILGFREDLSQTRGATAESINALPTYKFKVKRSRSVDGSNLGVFEGGVVAAGTDKERMISGEDARLRFEFTGDGLSSRCVGGISVRLSKESFHREYRRRCGFVVNIMKGAVFMHTIPDYSSSAMQIDLIDPMPNDLHSQSLFLSSMPMRQLDGLQKFLIPSQPRGMEYMPSNMGLKTSSLPVKRKAPMDILASVSKQSSIFSRPDAEMEHRPWLHQVSPPNKRFAHLLSLPPGPVIPQSRRTQRSSTPRNHAVIINNSPKFQNEPYDSVIQRSSTPRNHAVIINNSPKFQNAPYDSVRSKMRDSLSAALALVSQKQDTTINEGKNSITETEKTVEQQDNINTASVEVDPDGIMSGKVNEAPFPKEKSSPDKNKDENTSQKVFEGLNETLGYDRLQFQTSNILPYEEISFDDNFFSKDELLQGNGLSWVLDSEMQMAERNEIQLVGKQKLEEVDVVEEEKKVESPGTLATKIEMELFNLFGGVNKKYKEKGRSLLFNLKDPNNPELRERVMYGDITPERLCSMSVEELASKELSQWRMAKAEELAQMVVLPESEVDIRRLVKKTHKGEFQVEVEESDNVPIEVSAGASAFAISESNNSGTEGPSPDKDELNTVSTKYNLENKDVPYELALQPNEGTDLMQGLIVDDSLKDAEFLPPIISLDEFMLSLQSEPPFENLSSATKKSGDIELGSDSKSSSLLPKYPANKTPEKNEKTDEARIESDADVKSVDDHSNLRSNDNHAGGKSSVGDADFRSRGNDIDLKIDDNDVKSEKTSPLNMPKVEYLWRGLLQLNTSSTISIAGVFKGGEKASAKEWPGSLEIKGRVRVDAFEKFLRGLPLSRSRAFMVAHFDLKETSSENERANLVEVVDSYVSDQRVGFAEVSSGVEIYFCPPRETTLEMFNKNLPKKIVECLDSIDTGLIGFVVWKKPHYASTISPNSSSHHKHSSKRQHSSSRRHTDSSLNVDSPKQRIPAPSFPRPDTRTQLAVASVNDDDNEDDRDVPPGFGPGAPREDDDLPEFNFSASVPQISAQTTIQRSNMPSFHPLSQTSPPPVEKIRELIHKYGQSESHESSGKWTDKRVVGGGAQSLNDDDDDDDDIPEWQPQAPQYKSHVAQPLQGLEPPKMRMHEQHLRAAQQLLPHHILAPARSSADEDLTMDAMVDDINAYSYTYPVQLPSKKFFFKCATLIEFHSAGCLTLFVYLRVESRKPERYSSAAPLSPDARLRIVSERVDIVDNLIISVSIGPPNSMFLKSTDKSTWVAKDVADSVLADKSALRVTSSQRMAESSVIDVHSSEIDGQPYWYYEYLVRKSPTKIVQESDTYRRYIASTTERDGYLYSLNASTLSQQWNTMGPILEKTAASFRLLPPTENYVPPYKDPWRFW 1662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 205414 219891 + BLOR15857 Blo17g00036 72424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00036 1662 MobiDBLite consensus disorder prediction 600 661 - -
Blo17g00036 1662 SUPERFAMILY Mog1p/PsbP-like 1489 1644 IPR016123 -
Blo17g00036 1662 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 1427 1644 - -
Blo17g00036 1662 ProSiteProfiles TFIIS central domain profile. 728 839 IPR003618 GO:0006351
Blo17g00036 1662 MobiDBLite consensus disorder prediction 35 87 - -
Blo17g00036 1662 MobiDBLite consensus disorder prediction 959 1035 - -
Blo17g00036 1662 Gene3D - 717 814 IPR036575 GO:0006351
Blo17g00036 1662 MobiDBLite consensus disorder prediction 165 204 - -
Blo17g00036 1662 Pfam PsbP 1519 1643 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Blo17g00036 1662 SMART mid_6 723 822 IPR003618 GO:0006351
Blo17g00036 1662 MobiDBLite consensus disorder prediction 600 628 - -
Blo17g00036 1662 SUPERFAMILY Elongation factor TFIIS domain 2 744 815 IPR036575 GO:0006351
Blo17g00036 1662 MobiDBLite consensus disorder prediction 1344 1384 - -
Blo17g00036 1662 Pfam Transcription factor S-II (TFIIS), central domain 742 827 IPR003618 GO:0006351
Blo17g00036 1662 PANTHER TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN 406 1406 - -
Blo17g00036 1662 PANTHER SPOC DOMAIN / TRANSCRIPTION ELONGATION FACTOR S-II PROTEIN 406 1406 - -
Blo17g00036 1662 MobiDBLite consensus disorder prediction 647 661 - -
Blo17g00036 1662 MobiDBLite consensus disorder prediction 988 1019 - -
Blo17g00036 1662 MobiDBLite consensus disorder prediction 167 204 - -
Blo17g00036 1662 MobiDBLite consensus disorder prediction 35 94 - -
Blo17g00036 1662 Pfam SPOC domain 1062 1208 IPR012921 -
Blo17g00036 1662 MobiDBLite consensus disorder prediction 1215 1300 - -
Blo17g00036 1662 MobiDBLite consensus disorder prediction 959 984 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00179 Blo-Chr4:1484934 Blo17g00036 Blo-Chr17:205414 6.46E-11 dispersed
Blo06g00675 Blo-Chr6:29871000 Blo17g00036 Blo-Chr17:205414 1.11E-89 dispersed
Blo13g00827 Blo-Chr13:30982306 Blo17g00036 Blo-Chr17:205414 8.20E-11 dispersed
Blo01g01364 Blo-Chr1:51793052 Blo17g00036 Blo-Chr17:205414 5.29E-170 wgd
Blo17g00036 Blo-Chr17:205414 Blo18g00046 Blo-Chr18:306739 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00036 - - qsu:111982988 780.4