Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00037 ATGGCGTCCCCTGAGCTCCCTGTTTCAAGCCCTCGAACCACACGAGGCCCACACGAAACCCATCCTCCCCTGGCTCCCTCCAGTTTTCCGGGCAAGGTAGCGGGCGTCTTGAAATCCAATCTGGTTTTCCGGTCCAAATGGGGTGAAATTAATGGGGCTATGGGCGATTTGGGGACCTATATTCCTATAGTGTTGGCTTTGACGCTGTCGAAGGACCTTAACTTGGGTACAACGCTGATTTTCACAGGTGTTTACAACATTATCACCGGCGTTATCTACGGCGTTCCGATGCCTGTCCAGCCGATGAAATCAATCGCCGCTGTTGCCTTATCAACTGCCGATTTCGGTATCCCGGAGATGATGGCCGCCGGAATACTGACGGGAGGGACTCTGATTTTCCTGGGGGTTACCGGTTTGATGGAGCTCGCCTACTGGCTGATTCCTTTGCCTGTTGTTAGGGGGATTCAGCTAGCTCAAGGCTTATCTTTTGCACAAACTGCTGTTAAATACGTTCGTTATGATCAAAATATGGCCAAGTCCAAATCTCTCGATTACAGGGAGTGGTTCGGTTTGGACGGGCTGGTTTTGGCTCTCTTTTGTGCTTGTTTTGTTGTTATTGTTAATGGAGCAGGCGAAGAAAACCACGGCGAAGAATCCGAGGCCGACTCGGGAGGGCGATTCAGAAGATCAACTGCCAGATTGAGGAAACTCATATACTCACTTCCTTCAGCCTTTCTTATATCTTTGCTGGGTCTTGTTTTGGCATTTATAAGGAAGCCTAATATGGTGAAAGACATCAAGTTTGGCCCATCTTCCATTGATATTGTGAAGATGTCAAAGCATGCATGGAAAGATGGGTTCATAAAGGGGACAATCCCTCAGCTCCCACTCTCAATTTTGAATTCTGTGATTGGTGTTTGCAAATTGTCATCTGATCTGTTTCCAGGCAGGGACTTTTCAGCCACTTCGTTGTCGGTGACTGTCGGGCTGATGAACGTGACAGGGTGTTGGTTTGGGGCCTTTCCGACGTGCCATGGTGCCGGTGGGCTAGCCGGGCAGTACAAGTTTGGGGGAAGAAGTGGTGGCTGCGTGGCGCTTCTTGGCGCAGCCAAAACGACGCTTGGTTTGGTTTTGGGTAGTTCTTTGGTGGTGATTCTGAGGCATTTTCCGGTTGGAATTCTCGGGGTTTTGCTCCTCTTCGCCGGAGTGGAGCTTGCTATGGCTTGCAGAGACATGAACAGTAAAGAGCAGTCGTTTGTGCTGCTCATTTGCACGACGGTCTCACTCGTGGGCTCAAGCGCTGCGCTTGGTTTCTTGTGTGGCATGGCCAAAATGCATGTAAAAGCAGCTCAATCGTCATTTAGGGATCGGACACAGGAATTCCAGAATGTTGCGGAGAGGCTGAAGAAGTCTTTTCCATCATCTTCTGAGCAAAATGGGCCTAGTAATGCTTTGAAATTAGAGGATCAACGATCTGCAGTTGCAATTCAGTCTGAATTTAATAGAAGAGCTTCTAAAATCGGCTATGGAATACATCAGACATCGCAAAAACTTTCAAAGCTTGCTAAGTTGGCAAAAAGGACTTCAGTTTTTGATGATCCTACGGTGGAAATTCAGGAATTGACAGCAGTTATAAAGCAAGATATTACTGCATTGAACTCCGCAGTTGTGGACCTCCAGCTGCTTTCTCATTCCAGAAATGAGAGCGGGAATATTTCCAGGGACACAACTAGTCATTCAACCACTGTTGTAGATGACCTGAAGAATAGGCTAATGGGTGCTACAAAAGAATTTAAGGAAGTCCTCACCATGCGAACACAGAACTTGAAGGTTCATGAAAACAGAAGACAGCTGTTTTCTTCCACCGCCTCCAAAGATTCTGCCAACCCTTTTGTCCGTCAGCGTCCATTAGTTTCCAGGTCAACAGCTAGTCCGTCGAATGCACCTCCTCCTCCATGGGCAAATGGATCAGCATCTTCATCCCAGTCATTGAATAGAAAGCAAGCGGATGGGGAAAGTCAGCCACTTCTACAAGAGCAACAGCAACAACAGCAGTTAGTTCCTTTGCAAGACAGTTACATGCAGAGCAGAGCTGAAGCTCTTCAAAACGTTGAGTCCACCATTCATGAGTTGAGCAGCATTTTCAACCAACTTGCAACCCTCGTTTCCCAGCAAGGAGAGATTGCCATAAGAATTGATGAGAACATGGATGACACTTTGGCGAATGTTGAGGGAGCGCAGGGGGCGCTGCTCAAAACTAGAAAAATTGGGATTGGGATTGGAATTGGGAATGAAAGAAGTGAAAGTGAGTCATTCTAG 2319 47.56 MASPELPVSSPRTTRGPHETHPPLAPSSFPGKVAGVLKSNLVFRSKWGEINGAMGDLGTYIPIVLALTLSKDLNLGTTLIFTGVYNIITGVIYGVPMPVQPMKSIAAVALSTADFGIPEMMAAGILTGGTLIFLGVTGLMELAYWLIPLPVVRGIQLAQGLSFAQTAVKYVRYDQNMAKSKSLDYREWFGLDGLVLALFCACFVVIVNGAGEENHGEESEADSGGRFRRSTARLRKLIYSLPSAFLISLLGLVLAFIRKPNMVKDIKFGPSSIDIVKMSKHAWKDGFIKGTIPQLPLSILNSVIGVCKLSSDLFPGRDFSATSLSVTVGLMNVTGCWFGAFPTCHGAGGLAGQYKFGGRSGGCVALLGAAKTTLGLVLGSSLVVILRHFPVGILGVLLLFAGVELAMACRDMNSKEQSFVLLICTTVSLVGSSAALGFLCGMAKMHVKAAQSSFRDRTQEFQNVAERLKKSFPSSSEQNGPSNALKLEDQRSAVAIQSEFNRRASKIGYGIHQTSQKLSKLAKLAKRTSVFDDPTVEIQELTAVIKQDITALNSAVVDLQLLSHSRNESGNISRDTTSHSTTVVDDLKNRLMGATKEFKEVLTMRTQNLKVHENRRQLFSSTASKDSANPFVRQRPLVSRSTASPSNAPPPPWANGSASSSQSLNRKQADGESQPLLQEQQQQQQLVPLQDSYMQSRAEALQNVESTIHELSSIFNQLATLVSQQGEIAIRIDENMDDTLANVEGAQGALLKTRKIGIGIGIGNERSESESF 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 220725 225359 - BLOR15858 Blo17g00037 72425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00037 772 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 450 470 IPR021538 -
Blo17g00037 772 Gene3D - 495 746 - -
Blo17g00037 772 MobiDBLite consensus disorder prediction 653 685 - -
Blo17g00037 772 MobiDBLite consensus disorder prediction 1 16 - -
Blo17g00037 772 ProSitePatterns Syntaxin / epimorphin family signature. 697 736 IPR006012 GO:0005484|GO:0006886|GO:0016020
Blo17g00037 772 SUPERFAMILY t-snare proteins 498 746 IPR010989 GO:0016020|GO:0016192
Blo17g00037 772 PANTHER MOLYBDATE TRANSPORTER 1/2-RELATED 36 445 - -
Blo17g00037 772 MobiDBLite consensus disorder prediction 637 685 - -
Blo17g00037 772 CDD SNARE_syntaxin5 694 753 - -
Blo17g00037 772 PANTHER - 36 445 IPR031563 GO:0015098|GO:0015689
Blo17g00037 772 Pfam Molybdate transporter of MFS superfamily 48 163 IPR031563 GO:0015098|GO:0015689
Blo17g00037 772 Pfam Molybdate transporter of MFS superfamily 287 405 IPR031563 GO:0015098|GO:0015689
Blo17g00037 772 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 691 753 IPR000727 -
Blo17g00037 772 SMART tSNARE_6 686 753 IPR000727 -
Blo17g00037 772 MobiDBLite consensus disorder prediction 1 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo17g00037 Blo18g00048 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00243 Blo-Chr4:1874000 Blo17g00037 Blo-Chr17:220725 1.21E-73 dispersed
Blo05g00118 Blo-Chr5:1113222 Blo17g00037 Blo-Chr17:220725 2.53E-163 transposed
Blo18g00048 Blo-Chr18:320271 Blo17g00037 Blo-Chr17:220725 0 transposed
Blo17g00037 Blo-Chr17:220725 Blo18g00047 Blo-Chr18:315482 5.68E-179 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00037 - - csv:101212057 617.076