Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00067 ATGGCTCATCTCTTCAGGGAGCTTAGTCTGGGCCATTCGAGGAGAGAGACTACGCCGCCTCCTCAATCATCGGCGACGATTTCGGTGCCTAGTACGCAGATCATTTCCCCTGTAGATCTCCCTTCTCCACTCGGGGAATTCACTCCCCATCTCACTGATTCTGATCTCCGATTAACCGCTTACGAGGTCTTCGTCGCTGCTTGCCGAACCTCTACTGGAAAGCCGCTGAGTTATGTGCCTTCTTCTAATTCTCACACCGACTCGCCTACTCACCAACTCTCGCCTAGCTACCCTGCATTACAGCGATCTCTTACTTCTACTGCCGCTTCCAATTTTAAGAAGGCATTGGGTCTTGAATCTCCGAGTTCAGGATCGAAGAAGAGCCCTGGTTCAGGTTCGGGTTCGAGTTCAGGCAACGGGAGGACAAAGCGCGCTTTGACCGTGGGCGAGCTCATGAGGATCCAAATGAGAGTTTCTGAGACTATGGATTCTAGAATTAGGAGAGCTCTACTCAGGATTTCTGCTGGCCAGGTTGGAAGAAGAATTGAGTCAGTAGTAGTTCCACTAGAGTTACTCCAGCAGCTTAAGTCATCGGATTTTATGGATCATCAAGAGTTTGAATCATGGCAAAAGCGAACCATGAAAGTTCTAGAAGCTGGACTCCTAGTGTATCCCAAAATTCCAGTCGATAAGTCTAATACTGCAGCACAACGACTTAGACAAATGATCCAAGCTTCATTGGATAGACCCATTGAAACTGGAAAAAATAATGAGACTTTGCAACTACTACGTAGTGCTGTTATGTCTCTTGCTTACAGATCATTTGATGGGTCTCTTAATGAATCCTGCCACTGGGCAGATGGATGTCCCTTGAATCTTCGACTCTATGAGAAGCTACTTGAAGCCTGTTTCGATGCAAATGATGAAACATCTATGATTGAAGAAGTTGATGAACTAATGGAAAACATTAAGAAGACTTGGGGAATTCTTGGACTAAACCAAATGCTCCATAATCTTTGTTTTACCTGGGCTTTATTTTACCGTTTTGTCGCCACTAGCCAGGTTGAAATGGACTTGCTCTATGCTGTTGACAATCAGCTAGCAGAAGTGGCTAAAGATGCAAAGATAACTAAGGATCCACAATATTCCGAGACACTTAGTTCAACATTGACATCAATGCTTGGTTGGGCAGAAAAAAGGCTCCTTGCATATCATGACACATTTGATCTGGGAAATATTGATACCATGCAAGGCATTGTTTCATTGGGGGTATCTGCGGCTAAGATTTTAGTCGAAGATATATCAAATGAATACCGTAGGAGAAGGAAGGGTGATGTTGATGTAGCTCGAAACAGAATTGATACATATATCAGGTCATCATTACGCACTGCTTTTGCCCAGGCAATGCCTTTAAGTGTACTTCAGAAGATCTCCATCTGCTGTTTGCATATCTATTTCTTCATCATAACGAACCAGGTGTTCCACCATAACTTGCTTTATCAGCTTGAAGCCTTCCCTTTTCCATTTAAAATGGAGAAAGCAGATTCGAGTAGGAGAGCGTCCAAAAACCAGCCAAATTGTCTACCTGTCCTTGCCATCCTTTCAAAGGATGTTGGTGAGCTGGCACTCAATGAAAAACAGGTATTCAGTCCAATACTGAAGAAATGGCATCCTTTCGCTGCAGGTGTGGCTGTGGCCACACTTCATGCATGCTACAGAAACGAGATCAAACAATTCATGTCTGGTATCACAGAGTTAACACCCGATGCAATACAAGTTTTGAGAGCTGCTAATAAGCTTGAAACGGATCTAGTTCAGATAGCTGTGGAAGATTCAGTCGATAGTGATGATGGAGGGAAGGCAATAATCCGTGAGATGCCTCCTTTTGAGACTGAATCTGTAATGGCCAATCTAGTGAAAGCATGGATGAAACCAAGACTAGACAGAATGAAAGAATGGGTTGATAGAAATCTGCAACAAGAGGTGTGGAGTCCACTAGAAAATCAGGAAGGTTGTGCTCCATCTGCTATTGAGGTTATGAGAATAATAGATGAAACTTTGGATGCATACTTTCAGCTTCCAATACCAATGCACCCAGCTTTACTTCCTGATTTGGTCGCTGGTCTTGATAGATGTCTTCAATACTATATCACTAAGGCAAAATCTGGCTGCGGATCAAGGAATACATTTGTTCCTACTATGCCGGCATTGACCAGATGCACAATAGGATCAAAGTTCCAAGGATTTGGAAAGAAGAAAGAAAAACCAGTGAATTCACAGAGAAGGAATTCTCAAGTTTCAACAATGAATGGGGATAGTTCATTTGGGATTCCACAGCTTTGTGTTCGGGTCAATACTTTGCACCGAATTCAAAGCGAACTGGAAGCTATTGAGAAACGAATAATCACCCATCTCAGGAACTCTGATTCTGCTCATACAGAAGACTTTTCAAATGGTTCAGGAAAGAAATTTGAACTTTCACCAGCAGCTTGCATTGAAGGAGTTCAACAACTCTGCGAGTCAGCAGCTTATAAAGTAATTTTCCATGATCTAACTCATGTTCTGTGGGATGGTTTGTATATAGGGGTGCCCTCATCTTCTAGGATTGAGCCTTTTCTCCAGGAACTTGGGAGGCGAATGTCGACGATCTCAGATTCTGTGCATGAAAAAGTTCATACAAGGATTATTAATGACTTGATGAAAGCTTCTTTTGACGGGTTCTTACTGGTTTTGTTTGCTGGGGGCCCTTCTCGAGCCTTCTCCCGGCAGGATTCCCAAATAATAGAAGAGGATTTCAACTTGTTGAAGAATCTATTCTGGGCTAATGGAGATGGCTTACCTTCCGAGTTGGTAGAAAAGTCATCTAGTACTGCTAGAGATGTTCTTCCCCTTTTTCAAATGGACACAGATAGCCTCGTTGAGCGGTTTAAGCGTGTGACGATAGAGACTTACGGCTCTTCGGCTAGATCTAGGCTCCCACTTCCTCCTACTTCCGGGCAGTGGAACCCCATCGAGCCAAACACTCTCCTACGAGTTTTGTGCTATCGGAACGAAGATGCTGCATCAAAGTTTCTAAAGAAAACTTACAATCTACCCAAGAAGCTATGA 3108 43.44 MAHLFRELSLGHSRRETTPPPQSSATISVPSTQIISPVDLPSPLGEFTPHLTDSDLRLTAYEVFVAACRTSTGKPLSYVPSSNSHTDSPTHQLSPSYPALQRSLTSTAASNFKKALGLESPSSGSKKSPGSGSGSSSGNGRTKRALTVGELMRIQMRVSETMDSRIRRALLRISAGQVGRRIESVVVPLELLQQLKSSDFMDHQEFESWQKRTMKVLEAGLLVYPKIPVDKSNTAAQRLRQMIQASLDRPIETGKNNETLQLLRSAVMSLAYRSFDGSLNESCHWADGCPLNLRLYEKLLEACFDANDETSMIEEVDELMENIKKTWGILGLNQMLHNLCFTWALFYRFVATSQVEMDLLYAVDNQLAEVAKDAKITKDPQYSETLSSTLTSMLGWAEKRLLAYHDTFDLGNIDTMQGIVSLGVSAAKILVEDISNEYRRRRKGDVDVARNRIDTYIRSSLRTAFAQAMPLSVLQKISICCLHIYFFIITNQVFHHNLLYQLEAFPFPFKMEKADSSRRASKNQPNCLPVLAILSKDVGELALNEKQVFSPILKKWHPFAAGVAVATLHACYRNEIKQFMSGITELTPDAIQVLRAANKLETDLVQIAVEDSVDSDDGGKAIIREMPPFETESVMANLVKAWMKPRLDRMKEWVDRNLQQEVWSPLENQEGCAPSAIEVMRIIDETLDAYFQLPIPMHPALLPDLVAGLDRCLQYYITKAKSGCGSRNTFVPTMPALTRCTIGSKFQGFGKKKEKPVNSQRRNSQVSTMNGDSSFGIPQLCVRVNTLHRIQSELEAIEKRIITHLRNSDSAHTEDFSNGSGKKFELSPAACIEGVQQLCESAAYKVIFHDLTHVLWDGLYIGVPSSSRIEPFLQELGRRMSTISDSVHEKVHTRIINDLMKASFDGFLLVLFAGGPSRAFSRQDSQIIEEDFNLLKNLFWANGDGLPSELVEKSSSTARDVLPLFQMDTDSLVERFKRVTIETYGSSARSRLPLPPTSGQWNPIEPNTLLRVLCYRNEDAASKFLKKTYNLPKKL 1035
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 496040 500314 - BLOR15888 Blo17g00067 72455

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00067 1035 Coils Coil 787 807 - -
Blo17g00067 1035 PANTHER PROTEIN UNC-13 HOMOLOG 2 1035 IPR008528 -
Blo17g00067 1035 PANTHER ELONGATION FACTOR TS (DUF810) 2 1035 - -
Blo17g00067 1035 MobiDBLite consensus disorder prediction 751 771 - -
Blo17g00067 1035 MobiDBLite consensus disorder prediction 117 145 - -
Blo17g00067 1035 MobiDBLite consensus disorder prediction 117 143 - -
Blo17g00067 1035 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 591 734 IPR014770 -
Blo17g00067 1035 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 866 976 IPR014772 -
Blo17g00067 1035 MobiDBLite consensus disorder prediction 75 97 - -
Blo17g00067 1035 MobiDBLite consensus disorder prediction 8 28 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00067 - - - zju:107420474 1542.32
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00520 Blo-Chr1:5736810 Blo17g00067 Blo-Chr17:496040 0 dispersed
Blo02g00767 Blo-Chr2:25765045 Blo17g00067 Blo-Chr17:496040 0 dispersed
Blo07g00285 Blo-Chr7:3337855 Blo17g00067 Blo-Chr17:496040 6.57E-148 dispersed
Blo16g01018 Blo-Chr16:38529091 Blo17g00067 Blo-Chr17:496040 0 dispersed
Blo03g00201 Blo-Chr3:4693185 Blo17g00067 Blo-Chr17:496040 4.05E-12 transposed
Blo13g00650 Blo-Chr13:29119956 Blo17g00067 Blo-Chr17:496040 1.53E-108 transposed
Blo18g00079 Blo-Chr18:651953 Blo17g00067 Blo-Chr17:496040 0 transposed
Blo17g00067 Blo-Chr17:496040 Blo18g00078 Blo-Chr18:648425 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g288 . . . . Bpe02g01184 Bpe02g00248 . . Cmo05g00616 Cmo12g00203 . Cma05g00591 . Car12g00235 Sed01g1263 Cpe07g00213 . Bhi04g00855 Tan02g2557 Cmetu03g1871 . Hepe10g0368 . Lcy13g1418 . . . . . . . . . Cone17ag1126 Cone20ag0596 . . . Cme03g01747 Blo17g00067 . Bda01g00938 Bda13g01330 Bpe14g00518 . Bma01g01343 . . . . . Cma12g00250 . Car05g00535 Cpe11g00517 . . . . . . . . Cla08g01220 Cam08g1679 Cec08g1257 Cco08g1377 Clacu08g1377 . Cre08g1162 Lsi08g01083 . Chy03g01251 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001480 3 2 5 2 4 2 3 2 2 2 2 2 3 2 2 3 2 4 3 2 2 2 2 2 2 2 2 2 3 2 73
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo17g00067 Blo_Chr17 FPKM 7.828892 6.68638 26.157986 28.369652 13.714916 10.728215 11.197881 4.461413 3.302262 4.402548