Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00070 ATGTCTTCTGAAGCTCGAAATTCAGAAAATGAGAGCACTTCGAATTCAAACTCCAACTCGTTCTCGTCGACGCCATCGTCCCCTTCTTCGCCACCCTCCACACAATCACTTCAGGACCCTCTGTTAATCCCTAATTGTCCTTCTCCGGAACCGAAGAAGAACAAGCGAATGAGGGATACCAGCAAGTACCCACTTTACAGAGGCGTTCGAATGCGCAGTTGGGGCAAATGGGTGTCTGAAATTCGCGAGCCTCGCAAGAAATCACGCATTTGGCTTGGAACTTTTCCTACTGCTGAAATGGCTGCCAGAGCTCACGACGTCGCCGCCTTGAGCATCAAAGGTAATTCCGCCATTCTCAACTTCCCCGACCTCGTGGACTCTCTTCCTCGCCCGGTATCTCTCGCTCCTAGAGATGTACAAGCAGCGGCCGCGAAGGCAGCCCAGATGGAGAAATTCGAGTCTACGTCTTCAACGCCGTCGTCAACGATAGTTTCAGCAATGGAGTTTTTGGCGTCGACTGCCAACGAATCGGATGATCTGGGGGAGATCGTTGAGTTGCCAAGCTTAGGGACGACCTACGAGTCAAACGAGTTGAGGAATGAGTTTGTGTTAGTGGACTCAGTGGATGGTTGGTTATTCCAACCACCATGGTTGCAGAGCTTGGAGGATTGTGTGCTTAACAATGCGAGCGATGAGTTGACTACAGAAAACTTCGGTTTGAAATCAAGCGGTTTAGAGGGTTTGCTCTGGAACTATTGA 759 50.2 MSSEARNSENESTSNSNSNSFSSTPSSPSSPPSTQSLQDPLLIPNCPSPEPKKNKRMRDTSKYPLYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGNSAILNFPDLVDSLPRPVSLAPRDVQAAAAKAAQMEKFESTSSTPSSTIVSAMEFLASTANESDDLGEIVELPSLGTTYESNELRNEFVLVDSVDGWLFQPPWLQSLEDCVLNNASDELTTENFGLKSSGLEGLLWNY 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 534712 535470 - BLOR15891 Blo17g00070 72458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00070 252 ProSiteProfiles AP2/ERF domain profile. 65 122 IPR001471 GO:0003700|GO:0006355
Blo17g00070 252 MobiDBLite consensus disorder prediction 1 62 - -
Blo17g00070 252 Gene3D AP2/ERF domain 65 123 IPR036955 GO:0003700|GO:0006355
Blo17g00070 252 SUPERFAMILY DNA-binding domain 65 123 IPR016177 GO:0003677
Blo17g00070 252 MobiDBLite consensus disorder prediction 1 42 - -
Blo17g00070 252 Pfam AP2 domain 64 114 IPR001471 GO:0003700|GO:0006355
Blo17g00070 252 CDD AP2 64 124 IPR001471 GO:0003700|GO:0006355
Blo17g00070 252 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 6 250 - -
Blo17g00070 252 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Blo17g00070 252 PRINTS Ethylene responsive element binding protein signature 88 104 IPR001471 GO:0003700|GO:0006355
Blo17g00070 252 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 6 250 - -
Blo17g00070 252 SMART rav1_2 65 128 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00519 Blo-Chr1:5705740 Blo17g00070 Blo-Chr17:534712 3.77E-56 dispersed
Blo01g01775 Blo-Chr1:57464582 Blo17g00070 Blo-Chr17:534712 1.76E-81 dispersed
Blo16g01019 Blo-Chr16:38553246 Blo17g00070 Blo-Chr17:534712 2.10E-56 dispersed
Blo17g00070 Blo-Chr17:534712 Blo09g00093 Blo-Chr9:1750154 2.23E-35 dispersed
Blo12g00754 Blo-Chr12:25896657 Blo17g00070 Blo-Chr17:534712 2.36E-82 wgd
Blo17g00070 Blo-Chr17:534712 Blo18g00081 Blo-Chr18:691852 1.86E-103 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13484 PF00847 AP2 8.50E-14 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00070 K09286 - tcc:18587975 267.7