Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo17g00072 | ATGGCGAAAATAGCCCTGGGAACTACCCGAGAAGCCACCCAACCCGACTGTCTTAAAGCCCTCGTTGTTGAATTTATCACCACCTTTCTCTTCGTCTTCGCCGGTGTTGGAACAGCGATGGCCGCCGATAAGCTTGAAGGAACTCCATTCTTGGGGTTGTTCGCGGTGGCGATAGCGCATGCACTTGTGGTGGCTGTAATGATATCGGGCGGCCACATTTCCGGCGGTCATCTCAATCCAGCCGTCACCCTCGGCCTACTCGTCGGTGGGCATATCACGTTCTTCAGATCCGTTCTCTACTGGATCGATCAATTGCTAGCATCTGCCGCAGCTTGTTATCTCCTTTCTTATCTCACCGGAGGACTGACAACTCCGATCCATTCACTGGCGAGTGGAGTAGACTACTTACAGGGTGTCATATGGGAGGTAGTATTAACATTTTCGTTGCTGTTCACTGTGTATGCAACGATAGTGGACCCGAAGAAAGGAGCCATCGACGGTCTGGGGCCGACGCTGACTGGCTTTGTGGTGGGTGCCAACATATTAGCCGGAGGGGCCTTCTCCGGCGCTTCGATGAACCCGGCAAGATCCTTCGGCCCTGCGTTGGTGAGCTGGGACTGGACCGACCACTGGGTTTACTGGGTCGGCCCCCTCATCGGTGGAGGGCTTGCTGGGTTTATCTATGAAAATATCTTCATTCTTAGGTCTTCTCACCTCCCTCTTCCCAGAGGAGACGATGATATCTACTGA | 750 | 53.6 | MAKIALGTTREATQPDCLKALVVEFITTFLFVFAGVGTAMAADKLEGTPFLGLFAVAIAHALVVAVMISGGHISGGHLNPAVTLGLLVGGHITFFRSVLYWIDQLLASAAACYLLSYLTGGLTTPIHSLASGVDYLQGVIWEVVLTFSLLFTVYATIVDPKKGAIDGLGPTLTGFVVGANILAGGAFSGASMNPARSFGPALVSWDWTDHWVYWVGPLIGGGLAGFIYENIFILRSSHLPLPRGDDDIY | 249 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 548820 | 549836 | - | BLOR15893 | Blo17g00072 | 72460 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo17g00072 | 249 | CDD | MIP | 19 | 231 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Blo17g00072 | 249 | Pfam | Major intrinsic protein | 12 | 228 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Blo17g00072 | 249 | PANTHER | AQUAPORIN TIP4-1 | 2 | 246 | - | - | |
Blo17g00072 | 249 | ProSitePatterns | MIP family signature. | 77 | 85 | IPR022357 | - | |
Blo17g00072 | 249 | PRINTS | Major intrinsic protein family signature | 19 | 38 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Blo17g00072 | 249 | PRINTS | Major intrinsic protein family signature | 96 | 115 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Blo17g00072 | 249 | PRINTS | Major intrinsic protein family signature | 211 | 231 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Blo17g00072 | 249 | PRINTS | Major intrinsic protein family signature | 59 | 83 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Blo17g00072 | 249 | PRINTS | Major intrinsic protein family signature | 174 | 196 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Blo17g00072 | 249 | PRINTS | Major intrinsic protein family signature | 141 | 159 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Blo17g00072 | 249 | Gene3D | Glycerol uptake facilitator protein. | 2 | 245 | IPR023271 | - | |
Blo17g00072 | 249 | SUPERFAMILY | Aquaporin-like | 11 | 241 | IPR023271 | - | |
Blo17g00072 | 249 | PANTHER | AQUAPORIN-8 | 2 | 246 | IPR034294 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g00779 | Blo-Chr3:32479753 | Blo17g00072 | Blo-Chr17:548820 | 5.83E-27 | dispersed | |
Blo07g01383 | Blo-Chr7:33920361 | Blo17g00072 | Blo-Chr17:548820 | 1.03E-89 | dispersed | |
Blo17g00072 | Blo-Chr17:548820 | Blo14g00177 | Blo-Chr14:1386783 | 1.95E-30 | dispersed | |
Blo19g00111 | Blo-Chr19:3011372 | Blo17g00072 | Blo-Chr17:548820 | 5.53E-26 | dispersed | |
Blo17g00072 | Blo-Chr17:548820 | Blo15g00130 | Blo-Chr15:1155224 | 1.59E-49 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo17g00072 | K09873 | - | jre:109009497 | 419.468 |