Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00089 ATGGTGGTGAGGAAAGTGGGGAAGTATGAGGTGGGGAGGACGATCGGGGAGGGAACATTTGCTAAGGTAAAGTTTGCTCAGAACACGGAGACCGGCGAGAGTGTCGCTATGAAAATACTTGACCGGAGCACCATCATCAAGCACAAGATGGCAGACCAGATAAAAATGGAGATATCCATCATGAAGCTTGTCAGACACCCTTATGTCGTTCTTGCTAGCCGTACGAAGATATATATAATCCTAGAGTTCATTACAGGCGGTGAATTATTTGATAAAATAATTCACAAAGGGCGTCTTAGCGAAGCTGAGTCGAGGAGATACTTCCAACAGCTTATTGATGGTGTCGATTACTGCCACAGCAAGGGAGTATACCACAGAGATTTGAAGCCCGAAAATCTTCTTCTTGATTCCCAAGGTAATTTGAAGATTTCAGACTTTGGTCTTAGTGCATTGCCTGAAGAAGGAGTTAGCTTGCTTCGAACAACTTGCGGAACTCCAAATTATGTTGCTCCAGAGGTGCTTGGTCACAAAGGTTATGATGGTACCAAGGCAGACATTTGGTCCTGTGGGAACGTTGAAAATGCCGATTTTACATGTCCATCCTGGTTTCCAGTCGGAGCGAAATCTTTAATCCATAGAATTTTGGATCCAAATCCGGAAACTCGAATCTCAATTGATCAGATCAGGGAGGATGAATGGTATAAGAAGAGTTATGATCCTGTCAGACTTTTTGAATACGAAGATGTAAATCTGGACGATGTAAATGCCGTTTTTGATGATCCCGAGGAACAAAGGCTCGACGACGAAGAATTTGGGAGTGAGGACCGAGGCCCTCTTAATCTTAATGCATTTGACTTAATAATTTTATCTCAAGGGTTGAATCTTGCAACTCTGTTTGATCGTGGCCAGGACTCTATAAAGTATCAGACTCGCTTCGTCTCCCAGAAGCCTGCAAAGGTGATATTATCGACCATGGAAGTTGTTGCTCAATCGATGGGTTTTAAGACACATATTCGAAATTATAAGATGAGAGTTGAAGGGTTATCGTCGAGTAAAACGTCTCATTTCTCGGTTATTCTTGAGATTTTTGAAATTGCACCTACTTTCATCATGGTAGACGTTCAGAGAGTAGCTGGAGATGCTAGTGAGTACCTCAAGTTCTTCAAGAACTTCTGTGGTAATCTTGAGGATATCATATGGAAGCCACCCAACGAGTCGACCAAATCAAGGACACCAAGAACAAAGACGAAAAGACATTGA 1260 42.62 MVVRKVGKYEVGRTIGEGTFAKVKFAQNTETGESVAMKILDRSTIIKHKMADQIKMEISIMKLVRHPYVVLASRTKIYIILEFITGGELFDKIIHKGRLSEAESRRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSQGNLKISDFGLSALPEEGVSLLRTTCGTPNYVAPEVLGHKGYDGTKADIWSCGNVENADFTCPSWFPVGAKSLIHRILDPNPETRISIDQIREDEWYKKSYDPVRLFEYEDVNLDDVNAVFDDPEEQRLDDEEFGSEDRGPLNLNAFDLIILSQGLNLATLFDRGQDSIKYQTRFVSQKPAKVILSTMEVVAQSMGFKTHIRNYKMRVEGLSSSKTSHFSVILEIFEIAPTFIMVDVQRVAGDASEYLKFFKNFCGNLEDIIWKPPNESTKSRTPRTKTKRH 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 685700 689033 + BLOR15910 Blo17g00089 72477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00089 419 ProSiteProfiles NAF domain profile. 276 300 IPR018451 GO:0007165
Blo17g00089 419 PANTHER - 191 416 - -
Blo17g00089 419 ProSiteProfiles Protein kinase domain profile. 9 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00089 419 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Blo17g00089 419 SUPERFAMILY Protein kinase-like (PK-like) 6 250 IPR011009 -
Blo17g00089 419 Gene3D Kinase associated domain 1, KA1 275 401 - -
Blo17g00089 419 Pfam Protein kinase domain 9 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00089 419 SMART serkin_6 9 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00089 419 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 191 - -
Blo17g00089 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Blo17g00089 419 PANTHER - 2 191 - -
Blo17g00089 419 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 191 416 - -
Blo17g00089 419 CDD CIPK_C 282 392 - -
Blo17g00089 419 Pfam NAF domain 278 336 IPR004041 GO:0007165
Blo17g00089 419 Gene3D Transferase(Phosphotransferase) domain 1 3 272 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo14g00768 Blo-Chr14:23351266 Blo17g00089 Blo-Chr17:685700 0 dispersed
Blo17g00089 Blo-Chr17:685700 Blo02g00304 Blo-Chr2:3068255 2.11E-153 dispersed
Blo17g00089 Blo-Chr17:685700 Blo03g01518 Blo-Chr3:42071254 8.15E-136 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84779 PF00069 Pkinase 5.50E-55 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00089 - - zju:107421347 714.146