Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00096 ATGAAAGGAGAGTACGCGCCGCAGAAAAATGAAACCCATAGTATCTTCTCTAAGCTTCAACAGCGCCATAGCCACCACGACCAACCGCAGCTTCAAACCCACCTGTTTTCCAATCCATTTCACCTCTCTGCCACCAGAGAATGCCATACCCCAGAAGAAGACGACAACAGTCGCAGCAGTGGACCAGCGACCGCTGCAATAACTCAGAGCAAACTACCCCTAGAGCTCAGCTCCGGTGACGGAGCTACTCTAGAGGTCGTTAGGCGCCCTAGGGGCCGTCCACCCGGTTCGAAAAACAAACCAAAAACGCCCGTTATCGTAACCCGAGAGAGCGAGCCCTCTATGAGCCCTTACATTCTTGAAGTCCCCGGCGGTAACGACATAGTGGAAGCCATTGCCCTCTTTTCTAGACGGAAAAATATGGGTCTCTGCGTCTTCAGTGGCTCCGGAACAGTGGCAAATGTAACTTTACGGCAACCATCGAGCCCTCCTGGAGCAACCGTTACGTTCCATGGCCGCTTCGAGATCTTATCGATTTCCGCCACCTTCGTTCCTCATACTATGTCATACCCTGTCCCGAACGGCTTCACTATCTCTCTCTCAGGCCCTCAGGGCCAAATCATTGGCGGGTTAGTTGCCGGGTCTCTGGTTGCAGTTGGGGCAGTGTTCGTGATCGCGGCTTCTTTTAACAACCCTTCCTATCATCGGCTGCCGGAGGAAGATGAGGTAAGAAACTCAGTTTCAGACGGTGAGGGGCAATCTCCACCTGTTTCGTGCGGCGGAGAGAGTGGGGGGCGCGCTCCGGTGGATTCATGTGTGATGCCCGTATATGGTTGCCACGTTCCTTCCGACGTTGTCTGGGCTCCTACAGCCAGGCAACCGGCTCCGCCTCCACATCACCCATACCAGTAG 912 54.5 MKGEYAPQKNETHSIFSKLQQRHSHHDQPQLQTHLFSNPFHLSATRECHTPEEDDNSRSSGPATAAITQSKLPLELSSGDGATLEVVRRPRGRPPGSKNKPKTPVIVTRESEPSMSPYILEVPGGNDIVEAIALFSRRKNMGLCVFSGSGTVANVTLRQPSSPPGATVTFHGRFEILSISATFVPHTMSYPVPNGFTISLSGPQGQIIGGLVAGSLVAVGAVFVIAASFNNPSYHRLPEEDEVRNSVSDGEGQSPPVSCGGESGGRAPVDSCVMPVYGCHVPSDVVWAPTARQPAPPPHHPYQ 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 747745 748656 - BLOR15917 Blo17g00096 72484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00096 303 ProSiteProfiles PPC domain profile profile. 112 250 IPR005175 -
Blo17g00096 303 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 22 298 IPR014476 GO:0003680
Blo17g00096 303 Gene3D - 116 248 - -
Blo17g00096 303 MobiDBLite consensus disorder prediction 57 76 - -
Blo17g00096 303 CDD DUF296 117 226 IPR005175 -
Blo17g00096 303 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 231 IPR005175 -
Blo17g00096 303 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 22 298 - -
Blo17g00096 303 MobiDBLite consensus disorder prediction 236 264 - -
Blo17g00096 303 MobiDBLite consensus disorder prediction 47 106 - -
Blo17g00096 303 MobiDBLite consensus disorder prediction 1 29 - -
Blo17g00096 303 SUPERFAMILY AF0104/ALDC/Ptd012-like 114 241 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo14g00293 Blo-Chr14:2968866 Blo17g00096 Blo-Chr17:747745 4.23E-48 dispersed
Blo17g00096 Blo-Chr17:747745 Blo18g00103 Blo-Chr18:928542 2.71E-156 dispersed
Blo11g00012 Blo-Chr11:111911 Blo17g00096 Blo-Chr17:747745 3.18E-122 wgd
Blo12g00730 Blo-Chr12:25644970 Blo17g00096 Blo-Chr17:747745 1.24E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00096 - - zju:107421268 390.193