Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00098 ATGGCTAGAGAGAAGATCAAGATCAAGAAGATTGATAACTTGACTGCTAGACAAGTCACTTTCTCTAAAAGAAGACGAGGGCTTCTCAAGAAAGCGCAGGAGCTCTCTGTTCTCTGCGATGCTGAAGTTGCTCTCATCATCTTCTCCGCTACTGGAAAGCTCTTTGAATATTCCAACTCCAGCGTGAAAGATATACTTGCAAGGTACAGTTTGCACGCCAATAATCTGGGAAAACTGGATCAACCCTCCTTGGAGCTCCAGCTGATCGATAATAGCAATTACGGCGAAATGAGCAAGGAAATTGCAGAGAAGGCGCACCAACTGAGGCAAATGAGAGGTGAAGATCTTGAAGGTTTAAAACTGGAAGAGCTGATGCAGCTGGAGAAATTGATCGACGCAGGTCTCACCCGTGTGATGGAGACTAAGGATGAACGGATTATGAATGAGATAAATGCACTTGAAGTTAAGGTCAGTGTTATTAGTATTGTTAGTGTTATGGCGATGATGTCTAAAGGGAAGACGCCTGTTCTCCTGGAGGCGGACTTTGCACTCCAAGAAGAAGGCATGTCTTCCGACCTTTCAGCAGCCAATGTTTACAGCTGCAACAGTGGCCCTCCCACTGAGGACGATAGCTCCGATACCTCCCTCAAACTAGGAGCTCTTGCGGATAGTCAATTCTTACAGAGAATCGAGAATTTTTCACCCGCTCAGTTTCGGATCTCTACCTTGTTCTTACTCCCGATGAAGAGTCATTCATGTAGAGCTTTTGAAGTTTTTGATTTCCAGGAAGAAGATGAGCTTCCAGAGCTTGTCGCTGGGAAGTTTCTCAGCAAATTCAAAAATCCTAGCCCCTTTGACGGTTCGACCTTGAACTATGAAATTCGTGAATGCGCGAAAAATATTGGAAGTGTACCTCATGTAGGTGTTGATTTAGTTGACTGTGACCGTAGTAGTGAAGATGTTGCTTCTCATGGTATCCTGTGCTCAGCTGGAGGGTATTTTGTCACAAATAGAGAGAACTCCTCGGTAGAATCTGTCTTGCTTTCTAATTGGACATGCCATGGAGAAGAAACTCAATTGGAAGCACTTGAGTCCAGGGATTTCGATTCTGAATATGGGAAAATATACTCGAAGTCTCAAGATACTTCACTGGGGAATGACATCTTGAATTGTAGCCCTTCAGAGTGTCCTTCCAGTAATGAACCAGTTGATGCAGTTTCCGAATCCAGTCAGGGTCTGAATGAGGTTTGTTCTTCAAGTTCTGCTTCTGAAATTGCTGAAGATGATGTTCTGATGAATAGCTTCACATCAACAAATTCCCTCGAGGGCATGGAGTTGGATAATTTAAACCAGGAGATCGTTCTTCATCCTGATTATATTGTATACCGTGATAATTATTGCACTGATCCTCTATTAACTTTTTCACATAGTGGCATCAAAATCAATAGTTTTGCCACGCGTGGAAACCTTGGGTTCTTCAACTTTGAATGGGCAATTGATGATCTCATTAATATCGAATGTCAATCGTTCCAGAGGGTCGACGCTGTCATGATTAAGCTTCATGTGATATCAAAGGCTGCTGTTCAACCAGATATTGGATGTGACGCTTCAGGTATCGAGGAGATTAAGGTTGCTGTTGTTGACTCAAACTGGTCTGAGAAGCAGGGAAAAATCATGGCCCTGAATTTGAAATACATGGCTGTCTGGGATGGTTTGCCTGATGCAGACAGGGTAACTGATGGTGATTATCCGCTTGAACAGAAGCACTATTTCCCCAATTTTGATGAGCTTTTTGAAGAGGTTGTCTATCCAAAAGGAGATTCAGATGCAGTTACCATTAGCAAACGAGATGTTGATCTTTTACAGCCAGAGACATTTGTTAATGATACAATAATTGACTTTTACATCAAGTACTTGAAGAATCAGATTGAAAGTGAGGAAAGGCATAGATTTCATTTTTTCAATAGTTTCTTCTTTAGAAAGATGGCAGACTTAGATAAAGATCCATCCGGCGCTTCTGATGGCAGGGCTGCTTTTTTACGAATTAGAAAATGGACAAGGAAATTGGATTTGTTTAATAAGGATTTCATCTTCATTCCCATAAACTTCAACCTTCATTGGAGTTTAATCATCATATGCCATCCTGGTGAAATCGTGAAATACAATGATGAAGACTTGAAGAATTCTCTTAGAGCACCTTGTATATTACATATGGATTCTATTAAAGGAAGTCACGGGGGTCTTAAAAGTCTTATTCAAAGTTATTTGCGGGAAGAATGGAAAGAAAGGCAAACGGAGACAGCGCAAGATTTCTCATCCAAATTCTCCAGCCTCCGGTTTCTCCCTCTTGAGCTACCGCAGCAGGAAAATTTATTTGATTGTGGGTTGTTTTTGCTGCACTATCTCGAGCTGTTCCTAAAAGAGGCTCCTGTTAATTTCAATCCTTTCAAAATTTCGAAGTTCTCCAAGTTTTTCATTCTTCAGTCTGTTGCATCTATTATGAGGTTTTATTCTTTGGGCATAGCTCTTCTCATGTATTCTTCTTTTATATTCAACTGGAATTCTTTATTTGCATTTAATGATATCAATTTTCATCTGTTCCAGCTTAATGCGAATTGGTTTTCCCCTAATGAAGCTTCTCTCAAGCGCACTCTGATTCAGACGTTAATCTTCGAGTTGCTTGAAAACAGATCTCATGATAACCACGAGTCCAAATTGGCAAAATCTAATGAGAATAAATCTGGGGTGGAATATCTTTCAGAGAGATGCAGCACTGCTATAAAATGCAATGGGAGTGTATTGAAGTCCCAAACCGATGAAGGGATTGAAATTACAGTTATCTCAGCATCTTCACGAGACAACCTGCATGTCAGCAACTCAGACCCAGTTGCCAGGAATTTATTTGAATCAGTGGCTTCTTCTGGATCTCTACTTGGACGGCAACGATCATTATCATACTTTCATTTTGATGGGGCTATGTCAAGAATACAGGAAGATGGCGAAGAAGAATGTGCAGAGCATTTTGGGTATTTATCATCCGAGATTGGAATAGAATCTCAAAGTTGTGATTTTCCATACTCAACGCAAGGTTATGATGCCAACGCTTCTTACGACTTGCAAGATGACCACGAGGCTACCGGCTCATCCTCCCCTGAAACATCAGCTTGTACCTCCAGTTCCAGCGACTCAGAGGAGATTGGGATAATTGAAAATTTTCAAGCAGATAACATTCCAAGCCCTGGTCAGAAAGTAGGGATCTCCCCAGCAATTGACGATATAATTGAAAGCCCTCTAGAGACCGACTCATTTCACGACGCTGCTGAAACTCACCCTTCCTCCCCATGTAAAGAAAATCCCGTCATCTTGCGGAACGACGACTCAAAAATGGTCATGGAAAACAAAGAGATTGCATACGATATGGTTGTGGAATCGGACGAACAAGAAGAACATCCTGCAAAGAAGCTCAGATTCACGCGTTCTGTGGAAGATGAAGAAGGTGATAGCCAAAGAGGGAGGGATGATTCGATATTGGAGTGGATAGCTCCAAAACCTAGGCACATAGCTCTGCTGAATGGTGCTTTGCAAGGCATCACGACAGTTCAACAGCAGATAGACCTCTGGTCACCATTGCCTTCCCAAGAATGGAAACGATGTGTTGAGCCTAAAACCTCACCATTTGCAGTAGCTAAAATTTTGAATGCCACGTTGGTCATCCCTCACCTTGAAGTTAATCCTGTATGGCAAGATCCAAGTTCATTTACAGAAATATTTGATGTGGATCATTTCATTGACATCCTGCATCATGATATTGATATTGTAAAAGACCTTCCTGCCGAATACACTTGGAGCACAAGGGAATACTATGGCACTGGAATACGTGCTACTAGAATTAAAACAGCACCACTCCATGCTTCTGCTGACTGGTATTTGGAAAATGTATTGCCTGTATTACAAAGTTATGGGATTGCAGCTGTTGCTCCATTCTCTCATCGTCTGTCTTTTGAGAACATGCCTGCTGAGATTCAGCGTCTTCGGTGTAAGGTTAATTTTCAAGCATTAGCCTTTGTTCCTCACATTAGGTCATTGGGAGAAACCCTTGTCAACAGTCTGCGGAATCTTCCTGACAAAAATCAAGAATCAGGACTTGAGCATCTGCAAGGGACAAACGCAATGAGGAAACTAGACAATGGAAAGTTCGTTGTCCTACATCTCCGCTTTGATAAGGACATGGCTGCTCATTCAGCCTGTGATTTTGGCGGGGGTAAAGCTGAGAGACTGGCTCTTGCAAAATACCGACAAACGATATGGCAGGGGAGGGTTCAAAACTCCCAGTTCACTGATGAGGAGTTGAGAACACATGGGCGTTGCCCATTGACTCCAGAAGAAATAGGATTGTTGTTGGCTGCTTTGGGATTTAACAATAAGACTCATCTCTATCTTGCTTCTCACAAGGTTTATGGTGGAGAAGCAAGGATCTCATATTTGCGCAAATTATTTCCACTAATGGAAGATAAGAAAGGCATTGTCTCTCCGGAGGAACTGGCTATGGTAGAAGGGAAGGCATCTCTACTAGCTGCAGTTGATTATTACGTCAGCCTGCATAGCGACATCTTCATTTCTGCTTCGCCTGGCAATATGCATAATGCTTTGGTGGGACATCGAGCTTTCTTGAACATGAAAACTATAAGGCCAAACATGGCACTCTTGGGGAAGCTCTTCCAGAATAAGAGCATGGAGTGGGCGGAGTTTCAAAGAGCAGTTATTGATGGACATAGAACAAGACAAGGACAGGTCAGGTTAAGAAAAGAGAATCAGTCTATTTACACTTACCCTGCACCTGACTGCATGTGTCCAGGTAACGAGGGAGTTATGCCAGCAGTTAAGGAAGAGGACATTCCGGTGGAGCCTGCGGTTGGTCCGACAATGGCGCCAATGGAGTAG 4941 42.48 MAREKIKIKKIDNLTARQVTFSKRRRGLLKKAQELSVLCDAEVALIIFSATGKLFEYSNSSVKDILARYSLHANNLGKLDQPSLELQLIDNSNYGEMSKEIAEKAHQLRQMRGEDLEGLKLEELMQLEKLIDAGLTRVMETKDERIMNEINALEVKVSVISIVSVMAMMSKGKTPVLLEADFALQEEGMSSDLSAANVYSCNSGPPTEDDSSDTSLKLGALADSQFLQRIENFSPAQFRISTLFLLPMKSHSCRAFEVFDFQEEDELPELVAGKFLSKFKNPSPFDGSTLNYEIRECAKNIGSVPHVGVDLVDCDRSSEDVASHGILCSAGGYFVTNRENSSVESVLLSNWTCHGEETQLEALESRDFDSEYGKIYSKSQDTSLGNDILNCSPSECPSSNEPVDAVSESSQGLNEVCSSSSASEIAEDDVLMNSFTSTNSLEGMELDNLNQEIVLHPDYIVYRDNYCTDPLLTFSHSGIKINSFATRGNLGFFNFEWAIDDLINIECQSFQRVDAVMIKLHVISKAAVQPDIGCDASGIEEIKVAVVDSNWSEKQGKIMALNLKYMAVWDGLPDADRVTDGDYPLEQKHYFPNFDELFEEVVYPKGDSDAVTISKRDVDLLQPETFVNDTIIDFYIKYLKNQIESEERHRFHFFNSFFFRKMADLDKDPSGASDGRAAFLRIRKWTRKLDLFNKDFIFIPINFNLHWSLIIICHPGEIVKYNDEDLKNSLRAPCILHMDSIKGSHGGLKSLIQSYLREEWKERQTETAQDFSSKFSSLRFLPLELPQQENLFDCGLFLLHYLELFLKEAPVNFNPFKISKFSKFFILQSVASIMRFYSLGIALLMYSSFIFNWNSLFAFNDINFHLFQLNANWFSPNEASLKRTLIQTLIFELLENRSHDNHESKLAKSNENKSGVEYLSERCSTAIKCNGSVLKSQTDEGIEITVISASSRDNLHVSNSDPVARNLFESVASSGSLLGRQRSLSYFHFDGAMSRIQEDGEEECAEHFGYLSSEIGIESQSCDFPYSTQGYDANASYDLQDDHEATGSSSPETSACTSSSSDSEEIGIIENFQADNIPSPGQKVGISPAIDDIIESPLETDSFHDAAETHPSSPCKENPVILRNDDSKMVMENKEIAYDMVVESDEQEEHPAKKLRFTRSVEDEEGDSQRGRDDSILEWIAPKPRHIALLNGALQGITTVQQQIDLWSPLPSQEWKRCVEPKTSPFAVAKILNATLVIPHLEVNPVWQDPSSFTEIFDVDHFIDILHHDIDIVKDLPAEYTWSTREYYGTGIRATRIKTAPLHASADWYLENVLPVLQSYGIAAVAPFSHRLSFENMPAEIQRLRCKVNFQALAFVPHIRSLGETLVNSLRNLPDKNQESGLEHLQGTNAMRKLDNGKFVVLHLRFDKDMAAHSACDFGGGKAERLALAKYRQTIWQGRVQNSQFTDEELRTHGRCPLTPEEIGLLLAALGFNNKTHLYLASHKVYGGEARISYLRKLFPLMEDKKGIVSPEELAMVEGKASLLAAVDYYVSLHSDIFISASPGNMHNALVGHRAFLNMKTIRPNMALLGKLFQNKSMEWAEFQRAVIDGHRTRQGQVRLRKENQSIYTYPAPDCMCPGNEGVMPAVKEEDIPVEPAVGPTMAPME 1646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 774926 806065 + BLOR15919 Blo17g00098 72486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00098 1646 CDD MADS_MEF2_like 2 69 IPR033896 GO:0000977|GO:0045944
Blo17g00098 1646 CDD O-FucT_plant 1227 1562 IPR024709 -
Blo17g00098 1646 MobiDBLite consensus disorder prediction 1144 1171 - -
Blo17g00098 1646 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Blo17g00098 1646 Pfam K-box region 93 157 IPR002487 GO:0003700|GO:0005634|GO:0006355
Blo17g00098 1646 Gene3D - 13 81 IPR036879 GO:0003677|GO:0046983
Blo17g00098 1646 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1226 1617 - -
Blo17g00098 1646 SUPERFAMILY SRF-like 3 73 IPR036879 GO:0003677|GO:0046983
Blo17g00098 1646 Gene3D - 603 824 - -
Blo17g00098 1646 ProSiteProfiles K-box domain profile. 87 188 IPR002487 GO:0003700|GO:0005634|GO:0006355
Blo17g00098 1646 MobiDBLite consensus disorder prediction 1041 1063 - -
Blo17g00098 1646 ProSiteProfiles Ubiquitin-like protease family profile. 611 805 IPR003653 GO:0006508|GO:0008234
Blo17g00098 1646 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 1176 1224 - -
Blo17g00098 1646 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 1226 1617 - -
Blo17g00098 1646 Pfam GDP-fucose protein O-fucosyltransferase 1227 1556 IPR019378 -
Blo17g00098 1646 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Blo17g00098 1646 Pfam Ulp1 protease family, C-terminal catalytic domain 626 815 IPR003653 GO:0006508|GO:0008234
Blo17g00098 1646 SUPERFAMILY Cysteine proteinases 605 821 IPR038765 -
Blo17g00098 1646 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1176 1224 - -
Blo17g00098 1646 Gene3D - 651 782 - -
Blo17g00098 1646 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Blo17g00098 1646 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Blo17g00098 1646 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Blo17g00098 1646 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Blo17g00098 1646 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00740 Blo-Chr5:26357228 Blo17g00098 Blo-Chr17:774926 0 dispersed
Blo11g00911 Blo-Chr11:18832141 Blo17g00098 Blo-Chr17:774926 1.36E-26 dispersed
Blo17g00098 Blo-Chr17:774926 Blo06g00844 Blo-Chr6:31676092 5.87E-74 dispersed
Blo01g00074 Blo-Chr1:933393 Blo17g00098 Blo-Chr17:774926 6.19E-13 transposed
Blo04g01130 Blo-Chr4:18394377 Blo17g00098 Blo-Chr17:774926 3.44E-75 transposed
Blo04g01185 Blo-Chr4:21320009 Blo17g00098 Blo-Chr17:774926 1.77E-14 transposed
Blo08g00626 Blo-Chr8:24697458 Blo17g00098 Blo-Chr17:774926 3.04E-06 transposed
Blo17g00098 Blo-Chr17:774926 Blo18g00105 Blo-Chr18:971128 0 wgd
Blo17g00098 Blo-Chr17:774926 Blo06g00060 Blo-Chr6:1558512 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13489 PF10250 O-FucT 7.40E-51 CL0113 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00098 - K08596 csv:101206097 733.021