Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo17g00098 | ATGGCTAGAGAGAAGATCAAGATCAAGAAGATTGATAACTTGACTGCTAGACAAGTCACTTTCTCTAAAAGAAGACGAGGGCTTCTCAAGAAAGCGCAGGAGCTCTCTGTTCTCTGCGATGCTGAAGTTGCTCTCATCATCTTCTCCGCTACTGGAAAGCTCTTTGAATATTCCAACTCCAGCGTGAAAGATATACTTGCAAGGTACAGTTTGCACGCCAATAATCTGGGAAAACTGGATCAACCCTCCTTGGAGCTCCAGCTGATCGATAATAGCAATTACGGCGAAATGAGCAAGGAAATTGCAGAGAAGGCGCACCAACTGAGGCAAATGAGAGGTGAAGATCTTGAAGGTTTAAAACTGGAAGAGCTGATGCAGCTGGAGAAATTGATCGACGCAGGTCTCACCCGTGTGATGGAGACTAAGGATGAACGGATTATGAATGAGATAAATGCACTTGAAGTTAAGGTCAGTGTTATTAGTATTGTTAGTGTTATGGCGATGATGTCTAAAGGGAAGACGCCTGTTCTCCTGGAGGCGGACTTTGCACTCCAAGAAGAAGGCATGTCTTCCGACCTTTCAGCAGCCAATGTTTACAGCTGCAACAGTGGCCCTCCCACTGAGGACGATAGCTCCGATACCTCCCTCAAACTAGGAGCTCTTGCGGATAGTCAATTCTTACAGAGAATCGAGAATTTTTCACCCGCTCAGTTTCGGATCTCTACCTTGTTCTTACTCCCGATGAAGAGTCATTCATGTAGAGCTTTTGAAGTTTTTGATTTCCAGGAAGAAGATGAGCTTCCAGAGCTTGTCGCTGGGAAGTTTCTCAGCAAATTCAAAAATCCTAGCCCCTTTGACGGTTCGACCTTGAACTATGAAATTCGTGAATGCGCGAAAAATATTGGAAGTGTACCTCATGTAGGTGTTGATTTAGTTGACTGTGACCGTAGTAGTGAAGATGTTGCTTCTCATGGTATCCTGTGCTCAGCTGGAGGGTATTTTGTCACAAATAGAGAGAACTCCTCGGTAGAATCTGTCTTGCTTTCTAATTGGACATGCCATGGAGAAGAAACTCAATTGGAAGCACTTGAGTCCAGGGATTTCGATTCTGAATATGGGAAAATATACTCGAAGTCTCAAGATACTTCACTGGGGAATGACATCTTGAATTGTAGCCCTTCAGAGTGTCCTTCCAGTAATGAACCAGTTGATGCAGTTTCCGAATCCAGTCAGGGTCTGAATGAGGTTTGTTCTTCAAGTTCTGCTTCTGAAATTGCTGAAGATGATGTTCTGATGAATAGCTTCACATCAACAAATTCCCTCGAGGGCATGGAGTTGGATAATTTAAACCAGGAGATCGTTCTTCATCCTGATTATATTGTATACCGTGATAATTATTGCACTGATCCTCTATTAACTTTTTCACATAGTGGCATCAAAATCAATAGTTTTGCCACGCGTGGAAACCTTGGGTTCTTCAACTTTGAATGGGCAATTGATGATCTCATTAATATCGAATGTCAATCGTTCCAGAGGGTCGACGCTGTCATGATTAAGCTTCATGTGATATCAAAGGCTGCTGTTCAACCAGATATTGGATGTGACGCTTCAGGTATCGAGGAGATTAAGGTTGCTGTTGTTGACTCAAACTGGTCTGAGAAGCAGGGAAAAATCATGGCCCTGAATTTGAAATACATGGCTGTCTGGGATGGTTTGCCTGATGCAGACAGGGTAACTGATGGTGATTATCCGCTTGAACAGAAGCACTATTTCCCCAATTTTGATGAGCTTTTTGAAGAGGTTGTCTATCCAAAAGGAGATTCAGATGCAGTTACCATTAGCAAACGAGATGTTGATCTTTTACAGCCAGAGACATTTGTTAATGATACAATAATTGACTTTTACATCAAGTACTTGAAGAATCAGATTGAAAGTGAGGAAAGGCATAGATTTCATTTTTTCAATAGTTTCTTCTTTAGAAAGATGGCAGACTTAGATAAAGATCCATCCGGCGCTTCTGATGGCAGGGCTGCTTTTTTACGAATTAGAAAATGGACAAGGAAATTGGATTTGTTTAATAAGGATTTCATCTTCATTCCCATAAACTTCAACCTTCATTGGAGTTTAATCATCATATGCCATCCTGGTGAAATCGTGAAATACAATGATGAAGACTTGAAGAATTCTCTTAGAGCACCTTGTATATTACATATGGATTCTATTAAAGGAAGTCACGGGGGTCTTAAAAGTCTTATTCAAAGTTATTTGCGGGAAGAATGGAAAGAAAGGCAAACGGAGACAGCGCAAGATTTCTCATCCAAATTCTCCAGCCTCCGGTTTCTCCCTCTTGAGCTACCGCAGCAGGAAAATTTATTTGATTGTGGGTTGTTTTTGCTGCACTATCTCGAGCTGTTCCTAAAAGAGGCTCCTGTTAATTTCAATCCTTTCAAAATTTCGAAGTTCTCCAAGTTTTTCATTCTTCAGTCTGTTGCATCTATTATGAGGTTTTATTCTTTGGGCATAGCTCTTCTCATGTATTCTTCTTTTATATTCAACTGGAATTCTTTATTTGCATTTAATGATATCAATTTTCATCTGTTCCAGCTTAATGCGAATTGGTTTTCCCCTAATGAAGCTTCTCTCAAGCGCACTCTGATTCAGACGTTAATCTTCGAGTTGCTTGAAAACAGATCTCATGATAACCACGAGTCCAAATTGGCAAAATCTAATGAGAATAAATCTGGGGTGGAATATCTTTCAGAGAGATGCAGCACTGCTATAAAATGCAATGGGAGTGTATTGAAGTCCCAAACCGATGAAGGGATTGAAATTACAGTTATCTCAGCATCTTCACGAGACAACCTGCATGTCAGCAACTCAGACCCAGTTGCCAGGAATTTATTTGAATCAGTGGCTTCTTCTGGATCTCTACTTGGACGGCAACGATCATTATCATACTTTCATTTTGATGGGGCTATGTCAAGAATACAGGAAGATGGCGAAGAAGAATGTGCAGAGCATTTTGGGTATTTATCATCCGAGATTGGAATAGAATCTCAAAGTTGTGATTTTCCATACTCAACGCAAGGTTATGATGCCAACGCTTCTTACGACTTGCAAGATGACCACGAGGCTACCGGCTCATCCTCCCCTGAAACATCAGCTTGTACCTCCAGTTCCAGCGACTCAGAGGAGATTGGGATAATTGAAAATTTTCAAGCAGATAACATTCCAAGCCCTGGTCAGAAAGTAGGGATCTCCCCAGCAATTGACGATATAATTGAAAGCCCTCTAGAGACCGACTCATTTCACGACGCTGCTGAAACTCACCCTTCCTCCCCATGTAAAGAAAATCCCGTCATCTTGCGGAACGACGACTCAAAAATGGTCATGGAAAACAAAGAGATTGCATACGATATGGTTGTGGAATCGGACGAACAAGAAGAACATCCTGCAAAGAAGCTCAGATTCACGCGTTCTGTGGAAGATGAAGAAGGTGATAGCCAAAGAGGGAGGGATGATTCGATATTGGAGTGGATAGCTCCAAAACCTAGGCACATAGCTCTGCTGAATGGTGCTTTGCAAGGCATCACGACAGTTCAACAGCAGATAGACCTCTGGTCACCATTGCCTTCCCAAGAATGGAAACGATGTGTTGAGCCTAAAACCTCACCATTTGCAGTAGCTAAAATTTTGAATGCCACGTTGGTCATCCCTCACCTTGAAGTTAATCCTGTATGGCAAGATCCAAGTTCATTTACAGAAATATTTGATGTGGATCATTTCATTGACATCCTGCATCATGATATTGATATTGTAAAAGACCTTCCTGCCGAATACACTTGGAGCACAAGGGAATACTATGGCACTGGAATACGTGCTACTAGAATTAAAACAGCACCACTCCATGCTTCTGCTGACTGGTATTTGGAAAATGTATTGCCTGTATTACAAAGTTATGGGATTGCAGCTGTTGCTCCATTCTCTCATCGTCTGTCTTTTGAGAACATGCCTGCTGAGATTCAGCGTCTTCGGTGTAAGGTTAATTTTCAAGCATTAGCCTTTGTTCCTCACATTAGGTCATTGGGAGAAACCCTTGTCAACAGTCTGCGGAATCTTCCTGACAAAAATCAAGAATCAGGACTTGAGCATCTGCAAGGGACAAACGCAATGAGGAAACTAGACAATGGAAAGTTCGTTGTCCTACATCTCCGCTTTGATAAGGACATGGCTGCTCATTCAGCCTGTGATTTTGGCGGGGGTAAAGCTGAGAGACTGGCTCTTGCAAAATACCGACAAACGATATGGCAGGGGAGGGTTCAAAACTCCCAGTTCACTGATGAGGAGTTGAGAACACATGGGCGTTGCCCATTGACTCCAGAAGAAATAGGATTGTTGTTGGCTGCTTTGGGATTTAACAATAAGACTCATCTCTATCTTGCTTCTCACAAGGTTTATGGTGGAGAAGCAAGGATCTCATATTTGCGCAAATTATTTCCACTAATGGAAGATAAGAAAGGCATTGTCTCTCCGGAGGAACTGGCTATGGTAGAAGGGAAGGCATCTCTACTAGCTGCAGTTGATTATTACGTCAGCCTGCATAGCGACATCTTCATTTCTGCTTCGCCTGGCAATATGCATAATGCTTTGGTGGGACATCGAGCTTTCTTGAACATGAAAACTATAAGGCCAAACATGGCACTCTTGGGGAAGCTCTTCCAGAATAAGAGCATGGAGTGGGCGGAGTTTCAAAGAGCAGTTATTGATGGACATAGAACAAGACAAGGACAGGTCAGGTTAAGAAAAGAGAATCAGTCTATTTACACTTACCCTGCACCTGACTGCATGTGTCCAGGTAACGAGGGAGTTATGCCAGCAGTTAAGGAAGAGGACATTCCGGTGGAGCCTGCGGTTGGTCCGACAATGGCGCCAATGGAGTAG | 4941 | 42.48 | MAREKIKIKKIDNLTARQVTFSKRRRGLLKKAQELSVLCDAEVALIIFSATGKLFEYSNSSVKDILARYSLHANNLGKLDQPSLELQLIDNSNYGEMSKEIAEKAHQLRQMRGEDLEGLKLEELMQLEKLIDAGLTRVMETKDERIMNEINALEVKVSVISIVSVMAMMSKGKTPVLLEADFALQEEGMSSDLSAANVYSCNSGPPTEDDSSDTSLKLGALADSQFLQRIENFSPAQFRISTLFLLPMKSHSCRAFEVFDFQEEDELPELVAGKFLSKFKNPSPFDGSTLNYEIRECAKNIGSVPHVGVDLVDCDRSSEDVASHGILCSAGGYFVTNRENSSVESVLLSNWTCHGEETQLEALESRDFDSEYGKIYSKSQDTSLGNDILNCSPSECPSSNEPVDAVSESSQGLNEVCSSSSASEIAEDDVLMNSFTSTNSLEGMELDNLNQEIVLHPDYIVYRDNYCTDPLLTFSHSGIKINSFATRGNLGFFNFEWAIDDLINIECQSFQRVDAVMIKLHVISKAAVQPDIGCDASGIEEIKVAVVDSNWSEKQGKIMALNLKYMAVWDGLPDADRVTDGDYPLEQKHYFPNFDELFEEVVYPKGDSDAVTISKRDVDLLQPETFVNDTIIDFYIKYLKNQIESEERHRFHFFNSFFFRKMADLDKDPSGASDGRAAFLRIRKWTRKLDLFNKDFIFIPINFNLHWSLIIICHPGEIVKYNDEDLKNSLRAPCILHMDSIKGSHGGLKSLIQSYLREEWKERQTETAQDFSSKFSSLRFLPLELPQQENLFDCGLFLLHYLELFLKEAPVNFNPFKISKFSKFFILQSVASIMRFYSLGIALLMYSSFIFNWNSLFAFNDINFHLFQLNANWFSPNEASLKRTLIQTLIFELLENRSHDNHESKLAKSNENKSGVEYLSERCSTAIKCNGSVLKSQTDEGIEITVISASSRDNLHVSNSDPVARNLFESVASSGSLLGRQRSLSYFHFDGAMSRIQEDGEEECAEHFGYLSSEIGIESQSCDFPYSTQGYDANASYDLQDDHEATGSSSPETSACTSSSSDSEEIGIIENFQADNIPSPGQKVGISPAIDDIIESPLETDSFHDAAETHPSSPCKENPVILRNDDSKMVMENKEIAYDMVVESDEQEEHPAKKLRFTRSVEDEEGDSQRGRDDSILEWIAPKPRHIALLNGALQGITTVQQQIDLWSPLPSQEWKRCVEPKTSPFAVAKILNATLVIPHLEVNPVWQDPSSFTEIFDVDHFIDILHHDIDIVKDLPAEYTWSTREYYGTGIRATRIKTAPLHASADWYLENVLPVLQSYGIAAVAPFSHRLSFENMPAEIQRLRCKVNFQALAFVPHIRSLGETLVNSLRNLPDKNQESGLEHLQGTNAMRKLDNGKFVVLHLRFDKDMAAHSACDFGGGKAERLALAKYRQTIWQGRVQNSQFTDEELRTHGRCPLTPEEIGLLLAALGFNNKTHLYLASHKVYGGEARISYLRKLFPLMEDKKGIVSPEELAMVEGKASLLAAVDYYVSLHSDIFISASPGNMHNALVGHRAFLNMKTIRPNMALLGKLFQNKSMEWAEFQRAVIDGHRTRQGQVRLRKENQSIYTYPAPDCMCPGNEGVMPAVKEEDIPVEPAVGPTMAPME | 1646 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 774926 | 806065 | + | BLOR15919 | Blo17g00098 | 72486 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo17g00098 | 1646 | CDD | MADS_MEF2_like | 2 | 69 | IPR033896 | GO:0000977|GO:0045944 | |
Blo17g00098 | 1646 | CDD | O-FucT_plant | 1227 | 1562 | IPR024709 | - | |
Blo17g00098 | 1646 | MobiDBLite | consensus disorder prediction | 1144 | 1171 | - | - | |
Blo17g00098 | 1646 | ProSiteProfiles | MADS-box domain profile. | 1 | 61 | IPR002100 | GO:0003677|GO:0046983 | |
Blo17g00098 | 1646 | Pfam | K-box region | 93 | 157 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Blo17g00098 | 1646 | Gene3D | - | 13 | 81 | IPR036879 | GO:0003677|GO:0046983 | |
Blo17g00098 | 1646 | PANTHER | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE | 1226 | 1617 | - | - | |
Blo17g00098 | 1646 | SUPERFAMILY | SRF-like | 3 | 73 | IPR036879 | GO:0003677|GO:0046983 | |
Blo17g00098 | 1646 | Gene3D | - | 603 | 824 | - | - | |
Blo17g00098 | 1646 | ProSiteProfiles | K-box domain profile. | 87 | 188 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Blo17g00098 | 1646 | MobiDBLite | consensus disorder prediction | 1041 | 1063 | - | - | |
Blo17g00098 | 1646 | ProSiteProfiles | Ubiquitin-like protease family profile. | 611 | 805 | IPR003653 | GO:0006508|GO:0008234 | |
Blo17g00098 | 1646 | PANTHER | O-FUCOSYLTRANSFERASE 2-RELATED | 1176 | 1224 | - | - | |
Blo17g00098 | 1646 | PANTHER | O-FUCOSYLTRANSFERASE 2-RELATED | 1226 | 1617 | - | - | |
Blo17g00098 | 1646 | Pfam | GDP-fucose protein O-fucosyltransferase | 1227 | 1556 | IPR019378 | - | |
Blo17g00098 | 1646 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 10 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Blo17g00098 | 1646 | Pfam | Ulp1 protease family, C-terminal catalytic domain | 626 | 815 | IPR003653 | GO:0006508|GO:0008234 | |
Blo17g00098 | 1646 | SUPERFAMILY | Cysteine proteinases | 605 | 821 | IPR038765 | - | |
Blo17g00098 | 1646 | PANTHER | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE | 1176 | 1224 | - | - | |
Blo17g00098 | 1646 | Gene3D | - | 651 | 782 | - | - | |
Blo17g00098 | 1646 | PRINTS | MADS domain signature | 3 | 23 | IPR002100 | GO:0003677|GO:0046983 | |
Blo17g00098 | 1646 | PRINTS | MADS domain signature | 23 | 38 | IPR002100 | GO:0003677|GO:0046983 | |
Blo17g00098 | 1646 | PRINTS | MADS domain signature | 38 | 59 | IPR002100 | GO:0003677|GO:0046983 | |
Blo17g00098 | 1646 | ProSitePatterns | MADS-box domain signature. | 3 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Blo17g00098 | 1646 | SMART | madsneu2 | 1 | 60 | IPR002100 | GO:0003677|GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo05g00740 | Blo-Chr5:26357228 | Blo17g00098 | Blo-Chr17:774926 | 0 | dispersed | |
Blo11g00911 | Blo-Chr11:18832141 | Blo17g00098 | Blo-Chr17:774926 | 1.36E-26 | dispersed | |
Blo17g00098 | Blo-Chr17:774926 | Blo06g00844 | Blo-Chr6:31676092 | 5.87E-74 | dispersed | |
Blo01g00074 | Blo-Chr1:933393 | Blo17g00098 | Blo-Chr17:774926 | 6.19E-13 | transposed | |
Blo04g01130 | Blo-Chr4:18394377 | Blo17g00098 | Blo-Chr17:774926 | 3.44E-75 | transposed | |
Blo04g01185 | Blo-Chr4:21320009 | Blo17g00098 | Blo-Chr17:774926 | 1.77E-14 | transposed | |
Blo08g00626 | Blo-Chr8:24697458 | Blo17g00098 | Blo-Chr17:774926 | 3.04E-06 | transposed | |
Blo17g00098 | Blo-Chr17:774926 | Blo18g00105 | Blo-Chr18:971128 | 0 | wgd | |
Blo17g00098 | Blo-Chr17:774926 | Blo06g00060 | Blo-Chr6:1558512 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13489 | PF10250 | O-FucT | 7.40E-51 | CL0113 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo17g00098 | - | K08596 | csv:101206097 | 733.021 |