Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00100 ATGGCGGCTGCGAATCCTCAGCCTCTGCAGAGCCGTCCCTTCGACGACCATGTACGTGGTCTTATAACGATTGGAGAGGAAGAAGACGAATACGAAGATGGAAGTGGCGATGCTCTGGATGATGTCCAGGATGCTCAAATGAATTCGGTTAGCGTCGTTAACCATGGTGGATTACAGGTTGCGTCAAGGACTAGCGAACTTACGCTCTCTTTTGAAGGCGAGGTCTATGTCTTTCCCGCCGTAACGCCTGAAAAGGTGCAAGCAGTGCTTTTGCTTTTGGGGGGTCGTGATGTGCCAAGTGGCATGCCCACGGTTGAAGTACCTTATGATCAAAGTAACAGGGGAGTTATTGACCCTCCAAAACGCTCAAACCTGTCACGAAGAATAGCTTCCCTTGTTAGGTTTCGAGAAAAGCGAAAGGAAAGATGTTTTGACAAGAAAATTAGATATACTGTACGAAAAGAGGTTGCACAGAGGATGCACCGCAAGAATGGTCAGTTTGCATCATTGAAAGAAAATTCGGGTGCTTCAAGTTGGGATTCTGCTGAGAATGGCCCACAAGATGGTATTCGTTCAGAAACTGTTCTACGAAGATGTCAGCATTGTGGTGTTAATGAAAGTAATACTCCTGCAATGCGCCGTGGTCCGGCTGGACCAAGGACTTTATGCAATGCATGTGGTCTGATGTGGGCAAATAAAGGTACTTTGAGAGACCTCAGCAAGGGTGGAAGGAGTATTTCTGTTGAACCAAGAACTTCGGATGTGCAGGAATCGTCAATAGATATCAAGCCTTCTATAACAGAACCAGAAGTTTCTGATTACCAGGATGATCGTGTACTACTCTTCTTTTATGGACCAGAGGATCCTGGTAAGGCCGTAACAGAAAGTTCTAGTAATCCTTCTGTCCACCAACATCATGAAAATTTGCACGAAGATATTATGGACTCTCTGCCCAAGCAAATTGACCATTCTTCAGGGAATGATGATGAGCAGGAACAGGAACAGGAACCATTGGGTGAACTTGGTAATACTATGAATACAGAGTTAGATATCCCTGCTAACTTTGTTTAG 1071 45.19 MAAANPQPLQSRPFDDHVRGLITIGEEEDEYEDGSGDALDDVQDAQMNSVSVVNHGGLQVASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPSGMPTVEVPYDQSNRGVIDPPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKENSGASSWDSAENGPQDGIRSETVLRRCQHCGVNESNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSKGGRSISVEPRTSDVQESSIDIKPSITEPEVSDYQDDRVLLFFYGPEDPGKAVTESSSNPSVHQHHENLHEDIMDSLPKQIDHSSGNDDEQEQEQEPLGELGNTMNTELDIPANFV 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 844071 847511 + BLOR15921 Blo17g00100 72488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00100 356 ProSiteProfiles CCT domain profile. 128 170 IPR010402 GO:0005515
Blo17g00100 356 MobiDBLite consensus disorder prediction 313 356 - -
Blo17g00100 356 CDD ZnF_GATA 198 245 IPR000679 GO:0006355|GO:0043565
Blo17g00100 356 ProSiteProfiles Tify domain profile. 60 95 IPR010399 -
Blo17g00100 356 Pfam CCT motif 128 169 IPR010402 GO:0005515
Blo17g00100 356 PANTHER GATA TRANSCRIPTION FACTOR 28 1 355 IPR045280 GO:0006355
Blo17g00100 356 Pfam tify domain 63 94 IPR010399 -
Blo17g00100 356 ProSitePatterns GATA-type zinc finger domain. 199 226 IPR000679 GO:0006355|GO:0043565
Blo17g00100 356 MobiDBLite consensus disorder prediction 167 188 - -
Blo17g00100 356 MobiDBLite consensus disorder prediction 163 189 - -
Blo17g00100 356 MobiDBLite consensus disorder prediction 313 330 - -
Blo17g00100 356 SMART GATA_3 193 246 IPR000679 GO:0006355|GO:0043565
Blo17g00100 356 PANTHER GATA TRANSCRIPTION FACTOR 28-LIKE ISOFORM X1 1 355 - -
Blo17g00100 356 ProSiteProfiles GATA-type zinc finger domain profile. 193 251 IPR000679 GO:0006355|GO:0043565
Blo17g00100 356 MobiDBLite consensus disorder prediction 240 259 - -
Blo17g00100 356 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 194 247 - -
Blo17g00100 356 SMART tify_2 60 95 IPR010399 -
Blo17g00100 356 MobiDBLite consensus disorder prediction 337 356 - -
Blo17g00100 356 Pfam GATA zinc finger 199 235 IPR000679 GO:0006355|GO:0043565
Blo17g00100 356 Gene3D - 195 258 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00030 Blo-Chr3:1409011 Blo17g00100 Blo-Chr17:844071 7.08E-16 dispersed
Blo12g00738 Blo-Chr12:25745729 Blo17g00100 Blo-Chr17:844071 6.83E-69 dispersed
Blo17g00100 Blo-Chr17:844071 Blo15g00319 Blo-Chr15:3679218 3.84E-11 dispersed
Blo17g00100 Blo-Chr17:844071 Blo11g00004 Blo-Chr11:40146 2.75E-62 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13491 PF06203 CCT 1.40E-13 CL0281 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00100 - - mcha:111004894 481.485