Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00102 ATGGCGCCCAGATATGATTCTGGATTTTCAAGCCTTTTATGTGCAGAGGACTACTCCGTTTTCGATAATATCGAGTATGGAGGTGCGACGGAGCAGGTAGAGGAGGCTACGTGGCCTCGTCCGAATCACCGCACCCATTATCAGAATCAGAGCTCAAATGGCGAAATTTCGCTGTTGCCGAGCGACGAGTTCTTGAGTCTGATGATTGAGCAGGAATGCCATCATCTACCTCGGAGTGATTATTTGAAGAGGTTAAGAGATTTAGATCAAGACCTCGTGGCTAGAAAAGAAGCCGTGAAGTGGATAATAAAGGTTGGTGCTCATTTTAGTTTTGGACCTCTCTCTACATACTTGGCCATAAATTACTTGGATCGATTCCTTTCGACATACGAATTACCTAAAGGAAAAGCTTGGACTATGCAATTGCTAGCTGTGGCTTGTTTATCTCTTGCAGCAAAGTTGGAGGAGACTCAAGTTCCACTCTCTCTAGATTTGCAGGTGGGCGAACCCAAATTCGTCTTCGAATCCCGAACCATTCAAAGAATGGAGCTTCTGGTTTTGAGCACACTAAAGTGGAGAATGCAATCTATAACTCCATTTTCCTTCATAGAATATTATCTTCGCACGATTCTTGACGATCGGCTCTTACTTGAACTGTCAATCGTCCGATCGATTCAACTTTTTTCGAGCACTATGCGAGATATTGAGTTCTTGGAATTCAGACCATCAGAGATTGCAGCTGCAGTGGCTATATCTGTTGCTGGGGAGACCCAAACGGTGGATGTTGAAAAAGCAATTTCTCTGCTTATTCAGAACACCCAGGAGGAAAGAGTTGTAAAGTGCATTAAATTGATCGAGAGGGAGTTGTTAATCTCCAATGGTTCAGTTCTTGATCCGCAGAGTCCTAATGGGGTGTTGGAAATTGCCTGTATAAGCTACAGAAGTGATGAAACAGGAGATGGGTTGTGTGAGAGCACTGCCCATGGCAGCCCAGTCGCCATGGCCAAGAGGAGGAGGCTGAACAGAGCCTGTGATGTGGAGCTGTGA 1047 45.18 MAPRYDSGFSSLLCAEDYSVFDNIEYGGATEQVEEATWPRPNHRTHYQNQSSNGEISLLPSDEFLSLMIEQECHHLPRSDYLKRLRDLDQDLVARKEAVKWIIKVGAHFSFGPLSTYLAINYLDRFLSTYELPKGKAWTMQLLAVACLSLAAKLEETQVPLSLDLQVGEPKFVFESRTIQRMELLVLSTLKWRMQSITPFSFIEYYLRTILDDRLLLELSIVRSIQLFSSTMRDIEFLEFRPSEIAAAVAISVAGETQTVDVEKAISLLIQNTQEERVVKCIKLIERELLISNGSVLDPQSPNGVLEIACISYRSDETGDGLCESTAHGSPVAMAKRRRLNRACDVEL 348
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
17 913786 915549 + BLOR15923 Blo17g00102 72490
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00102 348 SUPERFAMILY Cyclin-like 60 194 IPR036915 -
Blo17g00102 348 PANTHER CYCLINS 1 329 IPR039361 -
Blo17g00102 348 Gene3D - 78 195 - -
Blo17g00102 348 Gene3D - 67 283 - -
Blo17g00102 348 CDD CYCLIN 95 187 IPR013763 -
Blo17g00102 348 Pfam Cyclin, C-terminal domain 197 289 IPR004367 -
Blo17g00102 348 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 329 - -
Blo17g00102 348 SMART Cyclin_C_2 197 314 IPR004367 -
Blo17g00102 348 Pfam Cyclin, N-terminal domain 65 194 IPR006671 -
Blo17g00102 348 SUPERFAMILY Cyclin-like 179 288 IPR036915 -
Blo17g00102 348 SMART cyclin_7 100 188 IPR013763 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00926 Blo-Chr2:35829197 Blo17g00102 Blo-Chr17:913786 3.54E-61 dispersed
Blo04g01131 Blo-Chr4:18443841 Blo17g00102 Blo-Chr17:913786 3.56E-87 dispersed
Blo17g00102 Blo-Chr17:913786 Blo18g00114 Blo-Chr18:1071495 2.12E-168 dispersed
Blo11g00015 Blo-Chr11:137462 Blo17g00102 Blo-Chr17:913786 5.44E-98 wgd
Blo17g00102 Blo-Chr17:913786 Blo05g00746 Blo-Chr5:26607932 2.14E-36 wgd
Blo17g00102 Blo-Chr17:913786 Blo06g00063 Blo-Chr6:1806417 5.11E-87 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00102 K18810 - zju:107411149 413.69