Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00116 ATGGCGTCTTTTGCTCTCTTCAAAAGCTTCCTCCAAATCCTCATTCTTGTTTCATTGTTTGGAGCCTCTTCTGCTTCCAGGAAGCTTAGTGTGGTAGTGGAAGAGGAGGCCAACTTGTTGAAGTATCACAATGGTCCTCTTCTTTCTGGCAGAATCTCTGTTAATCTTATTTGGTATGGAAATTTTAAGGCTTCTCAGAGAGCCATCGTCGCCGATTTTGTGAATTCTCTGTATTCTTCTTCGTCTTCTCAAAAGGCTCTGCAACCCTCTGTTTCCTCGTGGTGGGGAATTACAGAGAAATACTACCATCTAGCTTCATCGAAAAGATCAATTTCCTCTTTCTCTCTCTATCTGGGTAAACAAATCCTCGACGAGAGCTACTCACTGGGAAAATCCCTGTCCAACCGGCAGATTGTGCAGCTAGCTTCTAAAGGTGACCAGAACAACGCCATTAACGTCGTTCTGACGTCCTCCGACGTAGCCGTGGAGGGGTTCTGCTCCAGCCGATGTGGAACCCACGGGTCATCGTCTTCAAACGGAGCCATTATGGGGAACAAGAATTCCAAATTCGCTTACATTTGGGTCGGAAACTCAGAAACTCAGTGCCCTGGTCAATGCGCTTGGCCGTTCTACAAGCCAATTTACGGACCACAGACTGAACCATTGATCGCACCCAACAACGCCGTGGGTCTGGACGGTATAGTCATCAACCTGGCCAGCCTCCTAGCAGGGACCGCCACCAACCCATTTGGAAACGGCTACTTTCAGGGGGCGGAGGGGGCGCCATTAGAGGCTGCTTCAGCTTGCCCAGGCGTCTATGGCAAAGGAGCCTACCCTGGTTACGCTGGAAATTTGTTGGTAGATCCAACTACAGGCGCTAGCTACAACGCAAATGGCGTTAACGGGAGAAAATACTTGCTTCCGGCGATGTATGATCCTTCTACGTCTTCTTGTTCGACCTTGGTCTGA 969 49.23 MASFALFKSFLQILILVSLFGASSASRKLSVVVEEEANLLKYHNGPLLSGRISVNLIWYGNFKASQRAIVADFVNSLYSSSSSQKALQPSVSSWWGITEKYYHLASSKRSISSFSLYLGKQILDESYSLGKSLSNRQIVQLASKGDQNNAINVVLTSSDVAVEGFCSSRCGTHGSSSSNGAIMGNKNSKFAYIWVGNSETQCPGQCAWPFYKPIYGPQTEPLIAPNNAVGLDGIVINLASLLAGTATNPFGNGYFQGAEGAPLEAASACPGVYGKGAYPGYAGNLLVDPTTGASYNANGVNGRKYLLPAMYDPSTSSCSTLV 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1060918 1061886 - BLOR15937 Blo17g00116 72504

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00116 322 Pfam Phosphate-induced protein 1 conserved region 40 321 IPR006766 -
Blo17g00116 322 PANTHER PROTEIN EXORDIUM-LIKE 5 1 322 IPR006766 -
Blo17g00116 322 PANTHER PHOSPHATE-RESPONSIVE 1 FAMILY PROTEIN 1 322 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00116 - - - tcc:18592134 478.018
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00859 Blo-Chr1:16063552 Blo17g00116 Blo-Chr17:1060918 8.92E-94 dispersed
Blo03g00007 Blo-Chr3:522192 Blo17g00116 Blo-Chr17:1060918 9.64E-127 dispersed
Blo11g00029 Blo-Chr11:244265 Blo17g00116 Blo-Chr17:1060918 1.81E-144 dispersed
Blo11g00030 Blo-Chr11:246614 Blo17g00116 Blo-Chr17:1060918 1.18E-154 dispersed
Blo13g00187 Blo-Chr13:7581636 Blo17g00116 Blo-Chr17:1060918 7.04E-123 dispersed
Blo17g00116 Blo-Chr17:1060918 Blo18g00130 Blo-Chr18:1204675 1.30E-102 dispersed
Blo17g00115 Blo-Chr17:1056636 Blo17g00116 Blo-Chr17:1060918 5.25E-118 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g431 . . . . Bpe02g00114 . . . . . . . . Car12g00151 . . Cpe07g00139 . . . . . . . . . . . . . . . . . . . . Chy04g00248 . Blo17g00116 . Bda11g00771 . . . . Bma02g00138 . . . . . . . . . . . . . . . . Cla11g01389 . Cec11g1472 Cco11g1469 Clacu11g1603 Cmu11g1422 Cre11g1843 . . . Cme04g00277
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000841 2 4 5 3 3 1 3 3 2 3 3 3 2 3 3 2 3 5 3 2 3 3 3 4 4 4 3 1 4 1 88
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo17g00116 Blo_Chr17 FPKM 31.75025 35.971523 13.522011 11.73755 24.53635 29.578058 25.127462 0.0 0.0 0.0