Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00127 ATGCTGGTATGGGAGGAGGAGTTTCTCGGGCTGACGAAAATGATAACTGGGGAAGCGGGAAAAAAGTCTATTCCTTCAAGATCCTCTACATTTGGTTCAGGTTTTCGCGATTCTGGTAGCTGGAATAGAGGTGGATTTCGCGAGAATGAGGGGGAGAGGCCTAGGTTGGTTTTGAATCCTCCAAGAGGCAATGCCAGTGTCAACTCTGAGGTTAATGAACCTCCAAAGACAAATAAGCCGAATCCATTTGGTGCAGCAAGGCCAAGAGAGGAGGTTTTAGCTCAGAAGGGGTTGGATTGGAAGAAGTTGGATTCAGATATCGATGCAAAGAAAACAAGTAGACCGACAAGTTCTCATTCTAGCAGACCTTCAAGTGCACAATCAAGCAGGTCGGAAGGCCAGGGTATGCAGGGCATAGAAAATTTGTTGAAGCCAAAGCCAAAAGTTAACCCATTTGGAAATGCTAAGCCCAGGGAAGTTTTGCTAGAGGAGAGAGGCAAAGATTGGCAAAAGATGGATCTCGAATTGGAGCATTGTGCAGTTGAAAGGGTGGAAACAAAAGAAGAAAGGATACTGAAAGAACAGATAGATAATTTAAAGAAAAAACTCAATGATGAATTCAAAGACAAGGAGAAAAAGGAGTTGGAGCAGGGCAGTGAGCAGAGTCAAAATTCCTCATCGGGTGCTCAAGTTGAGGTGGAGTCAGCTAAAGGTAAAGGAGCTGATGTTTTGGGACAGCTAGTGAATTACCAAATCACCAGGAATAGATTGGAGAGGTATGAATATGCTGGGAAAGATGCATATGTTCTCAATTTGTCTGTTGGATTGTATAATTCAGAAAGGTGCAGTGACAAGAAATTATGGGATCAAACAATTGTTGCTGGCAAGTCAGGGGAATTATACAAGTGGAAGAAAATTCTACGAGCAGATGTCTTCTGGAATATCTCAAGGTTTAGTTTTGTGGTTCTCTTGTTTCTTGCTGTAACGTTTCGATTCTTTGTACTCTTGGATATCAATAAATCTGATCGGCGATTACCTCCATGGATGTAG 1050 42.57 MLVWEEEFLGLTKMITGEAGKKSIPSRSSTFGSGFRDSGSWNRGGFRENEGERPRLVLNPPRGNASVNSEVNEPPKTNKPNPFGAARPREEVLAQKGLDWKKLDSDIDAKKTSRPTSSHSSRPSSAQSSRSEGQGMQGIENLLKPKPKVNPFGNAKPREVLLEERGKDWQKMDLELEHCAVERVETKEERILKEQIDNLKKKLNDEFKDKEKKELEQGSEQSQNSSSGAQVEVESAKGKGADVLGQLVNYQITRNRLERYEYAGKDAYVLNLSVGLYNSERCSDKKLWDQTIVAGKSGELYKWKKILRADVFWNISRFSFVVLLFLAVTFRFFVLLDINKSDRRLPPWM 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1167242 1171512 + BLOR15948 Blo17g00127 72515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00127 349 MobiDBLite consensus disorder prediction 22 37 - -
Blo17g00127 349 Coils Coil 189 216 - -
Blo17g00127 349 MobiDBLite consensus disorder prediction 19 157 - -
Blo17g00127 349 MobiDBLite consensus disorder prediction 116 136 - -
Blo17g00127 349 MobiDBLite consensus disorder prediction 210 232 - -
Blo17g00127 349 MobiDBLite consensus disorder prediction 92 115 - -
Blo17g00127 349 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 19 228 IPR010433 GO:0003743
Blo17g00127 349 MobiDBLite consensus disorder prediction 62 76 - -
Blo17g00127 349 Pfam Plant specific eukaryotic initiation factor 4B 19 225 IPR010433 GO:0003743
Blo17g00127 349 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 19 228 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00108 Blo-Chr9:2075201 Blo17g00127 Blo-Chr17:1167242 4.32E-54 dispersed
Blo14g00639 Blo-Chr14:12715750 Blo17g00127 Blo-Chr17:1167242 6.43E-127 dispersed
Blo17g00127 Blo-Chr17:1167242 Blo19g00091 Blo-Chr19:2324934 4.42E-102 dispersed
Blo17g00127 Blo-Chr17:1167242 Blo01g00109 Blo-Chr1:1492309 5.62E-53 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00127 - - jre:108991781 241.121