Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00128 ATGGAAAGCAAAGCTTCTCCCACCAGTGATCTCGGGGATCAGAAGAAGACGCAAGATTTCGATTACTCGAATAGATCGCAGTGGCTTCGGGCTGCTGTTTTAGGAGCAAACGATGGGTTAGTTTCAACTGCATCGTTGATGATGGGGGTCGGTGCTGTAAAACGAGAAAGCAAAGCCATGATTCTCACGGGTTTTGCCGGCCTAATAGCTGGAGCTTGCAGCATGGCGATAGGAGAATTCGTATCTGTCTATTCGCAGTTGGACATAGAGTTAGCTCAAATGAAGAGAGAGAAACAAAAGTGGGAGGATAGAGAAGAAAAAGGAGACGAAGCAGAAGATGAAGAGAGAAAAGAAGAGAGTTTGCCAAACCCTCTACAGGCAGCTGGAGCATCAGGTCTTGCGTTTTCAGTTGGAGCCTTTGTTCCATTAATGGCTGCTTCGTTTATAAGTGAGTACAGAGTGAGGTTAGCAGCGATTGCCGGTGCAGTGACTGTAGCTTTGATAGTGTTTGGATGGGTAGGAGCGGTGCTTGGGAAGTCGCCGCCGGTTAAGTCTACGTCTAGGGCTTTGATCGGAGGGTGGGTAGCCATGACTATAACTTTTTGGGTAATCAAGTGGGCTGGCTCAAATGGGCTCTCATAA 642 47.82 MESKASPTSDLGDQKKTQDFDYSNRSQWLRAAVLGANDGLVSTASLMMGVGAVKRESKAMILTGFAGLIAGACSMAIGEFVSVYSQLDIELAQMKREKQKWEDREEKGDEAEDEERKEESLPNPLQAAGASGLAFSVGAFVPLMAASFISEYRVRLAAIAGAVTVALIVFGWVGAVLGKSPPVKSTSRALIGGWVAMTITFWVIKWAGSNGLS 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1185135 1185776 + BLOR15949 Blo17g00128 72516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00128 213 CDD Nodulin-21 27 181 - -
Blo17g00128 213 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 14 209 - -
Blo17g00128 213 MobiDBLite consensus disorder prediction 96 124 - -
Blo17g00128 213 Coils Coil 84 111 - -
Blo17g00128 213 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 14 209 IPR008217 GO:0005384|GO:0030026
Blo17g00128 213 Pfam VIT family 117 203 IPR008217 GO:0005384|GO:0030026
Blo17g00128 213 Pfam VIT family 29 109 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01722 Blo-Chr1:56961538 Blo17g00128 Blo-Chr17:1185135 9.22E-89 dispersed
Blo17g00128 Blo-Chr17:1185135 Blo18g00140 Blo-Chr18:1299326 8.01E-121 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00128 K22736 - zju:107406772 281.182