Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00150 ATGGAGAATGGTTCAGTAGTACAAGGCCCAGCTTCTAGCCCTCTTAGTAAGGTTATTGTCGTTTCTGCCATCGCTGCTGGTGTTCAGTTTGGATGGGCTCTTCAGCTCTCTCTGTTAACTCCTTACGTTCAGCAATTAGGAGTTCCCCATACTTGGGCGGCATTCATCTGGCTATGCGGTCCTATTTCTGGTTTATTGGTTCAGCCAATCGTTGGCTATTATAGTGATCGGTGTACTTCGCGGATAGGCCGTCGCCGTCCTTTCATTATCGGCGGAGCGGTCTTCGTCGCCCTTGCTGTTTTCTTTATTGGCTTCGCGGCAGACATTGGCCATGTTGCCGGCGATGATCTATCGAAGGCCACAAAGCCACGAGCCGTCGCCATTTTCGTCGTCGGTTTTTGGGTGCTCGACGTGGCTAACAACATGTTGCAAGGACCTTGCAGAGCTTTTCTGGCTGATCTTTCCGGTGAGGATCATAGGAAAATGAGCCTCGCTAATGGGTTCTTCTCCTTCTTCATGGCTGTCGGAAATATTCTGGGTTACGCAGCTGGTTCGTACAGCGGCCTCCATAAGTTCCTTTCCTTCACAAAGACAAAAGCCTGCGACGATTACTGTGCAAATCTGAAATCTTGCTTCATCATCGACATCGTCCTCCTCATCACCGTGACAGCCTTTGCCGTTTTAACCGTCAGAGAGATTCCGTTAGAGAAGAAGGAGCACGGCGAGGAATCAGAGCCGTTCTTCCGCCAGCTGTCGACGGCGTTCAAGCAGCTTTCTAGACCCATGTGGATTCTCTTCCTTGTGACTGCTTTGAACTGGATCGCCTGGTTCCCCTTCCTGTTGTTCGACACAGATTGGATGGGTCTGGAAGTGTACGGAGGAAAGCCGAAGGGGACGGCGGAGGAAGTGAAGATTTATGATCTCGGTGTGCGAGCTGGGGCTCTAGGTTTGATGATTAACTCCATTGTTCTGGCCTTTGCATCTCTTGCAGTCGAACCCATTGGTCGTGCGCTGAAGGGCATGAAGAATTGGTGGGCGGTTGTTAACTTTATCCTGGCCATCTCCTTGGGTATGACTGTGGTTGTGACCAAGGTTGCTGAGAAATGGAGGCATGTCAATGGCCTCCACCATCCCCCCTCTGATATTAAAGCCGGAGCGTTGGCCATCTTTGCAATTCTTGGCATTCCTCTTTCAGTGAATTTCAGTGTTCCATGGGCTTTGGCGTCCATCTACTCCGTCACTTGCGGCGCTGGGCAAGGGCTTTCTCTTGGACTGTTGAACTTGGCCATCGTTATCCCACAGATGTTCGTGTCGGTGGTGAGCGGCCCTCTAGACGCAGCCTTCGGTGGCGGCAACTCCCCGGCATTTGTGATGGGCAGCATAGCAGCGGCGGTAAGCGCAATTCTGGCTCTGACGATTCTTCCAAAAACGCCGAGACAAACGAGCTCATTCTTCAGCACGGGAGGACATTAA 1473 51.66 MENGSVVQGPASSPLSKVIVVSAIAAGVQFGWALQLSLLTPYVQQLGVPHTWAAFIWLCGPISGLLVQPIVGYYSDRCTSRIGRRRPFIIGGAVFVALAVFFIGFAADIGHVAGDDLSKATKPRAVAIFVVGFWVLDVANNMLQGPCRAFLADLSGEDHRKMSLANGFFSFFMAVGNILGYAAGSYSGLHKFLSFTKTKACDDYCANLKSCFIIDIVLLITVTAFAVLTVREIPLEKKEHGEESEPFFRQLSTAFKQLSRPMWILFLVTALNWIAWFPFLLFDTDWMGLEVYGGKPKGTAEEVKIYDLGVRAGALGLMINSIVLAFASLAVEPIGRALKGMKNWWAVVNFILAISLGMTVVVTKVAEKWRHVNGLHHPPSDIKAGALAIFAILGIPLSVNFSVPWALASIYSVTCGAGQGLSLGLLNLAIVIPQMFVSVVSGPLDAAFGGGNSPAFVMGSIAAAVSAILALTILPKTPRQTSSFFSTGGH 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1408746 1410465 + BLOR15971 Blo17g00150 72538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00150 490 PANTHER SUGAR TRANSPORTER 11 482 - -
Blo17g00150 490 Pfam MFS/sugar transport protein 31 275 - -
Blo17g00150 490 SUPERFAMILY MFS general substrate transporter 19 480 IPR036259 -
Blo17g00150 490 PANTHER SUCROSE TRANSPORT PROTEIN SUC2-LIKE 11 482 - -
Blo17g00150 490 TIGRFAM GPH_sucrose: sucrose/H+ symporter 14 477 IPR005989 GO:0005887|GO:0008515|GO:0015770
Blo17g00150 490 CDD MFS_SLC45_SUC 19 472 - -
Blo17g00150 490 Gene3D MFS general substrate transporter like domains 15 480 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00422 Blo-Chr1:4767036 Blo17g00150 Blo-Chr17:1408746 7.10E-61 dispersed
Blo17g00150 Blo-Chr17:1408746 Blo01g01786 Blo-Chr1:57590023 5.20E-165 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00150 K15378 - csv:116401998 698.353