Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00157 ATGCCATTGAAGCCTCTTAATACCATCATCGTCGCGTTTATGCTGGGTATCACATTCTTGATTCTTTTCTTCTCTGGGTTTCTCGGGTTACCCTCTGCTTCAACCTCGACTTTACCCATTAATGGGGTGAGTTTCTCGGAAGTCAAATCTACGCCGGAACCCTTCACCGACTTGATCGGCGCCTTCAAGAAATGGGACTCTCAAGTGGGTTGTGCTCGGTTCAGGGAGAAGATCCGGATTAGTGGCGTAAATGGGTCGTTTTCTTCTCTGCAACGCGATGGCGCTGTTGATTCGGAGTGTGGAGAGCTGAAAATGAAGCATGTCAGCGTTTTAGTCAAGGGTTGGACTTGGATTCCTGATAATTTGGATAATTTGTATGCGTGTAAGTGCGGATTGAGCTGTCTCTGGACTAAATCTGGTGTTCTTGCTGACAAACCCGATGCATTGCTTTTTGAGACAACAACTCCTCCGCGGATGCGACGTAGCGGAGATCCACTTCGTGTATATATGGATCTCGAGGCAGGCAGGAAGCGATCAGGTTTTGAGGATCTATTCATCAGTTATCATGCAGAGGACAATGTCCAATCGACTTATGCCGGATCGCTCTTTCACAACGGGAGAAATTATCATGTGTCTCAATCTAAGAACAATGGTACGCTTGTATATTGGTCGTCGTCTCGGTGTCTTCCTCAAAGAAACCGACTGGCGGAGAAGCTCTTAAAAATGCTGCCTTCCCATTCTTTTGGCAAGTGTTTGAACAATGTGGGTGGTCTAGACGTGGCGCTTTCCCTCTACCCGGAGTGTGCCAACAACGGCGATTCGGCTCCGAAATGGTGGGACCATTTACATTGTGCCATGTCTCATTACAAGTTCGTTCTGGCCATTGAAAACACGATGACAGAGAGTTACGTGACGGAGAAGCTATTTTACACTCTAGATTCTGGTTCGGTTCCGATATACTTTGGCGCACCGAATGTGGCAGATTTTGTGCCTCCACATTCGATAATTGATGGGACTAAATTCAAGTCGTTGGAGGAACTGGCTTCATACGTAAAGGCCATTGCCAATGATCCCGTGGCATATGCGGAATATCATGCTTGGCGAAGATGTGGTGTGATGGGTGGCTACGGGAAGACCCGTTCGATGAGCCTCGACACGTTGCCATGTCGATTATGTGCGGCTGTTAGTAGGCGAGGCGGTAGAAATAGTTGA 1212 47.77 MPLKPLNTIIVAFMLGITFLILFFSGFLGLPSASTSTLPINGVSFSEVKSTPEPFTDLIGAFKKWDSQVGCARFREKIRISGVNGSFSSLQRDGAVDSECGELKMKHVSVLVKGWTWIPDNLDNLYACKCGLSCLWTKSGVLADKPDALLFETTTPPRMRRSGDPLRVYMDLEAGRKRSGFEDLFISYHAEDNVQSTYAGSLFHNGRNYHVSQSKNNGTLVYWSSSRCLPQRNRLAEKLLKMLPSHSFGKCLNNVGGLDVALSLYPECANNGDSAPKWWDHLHCAMSHYKFVLAIENTMTESYVTEKLFYTLDSGSVPIYFGAPNVADFVPPHSIIDGTKFKSLEELASYVKAIANDPVAYAEYHAWRRCGVMGGYGKTRSMSLDTLPCRLCAAVSRRGGRNS 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1463821 1466581 - BLOR15978 Blo17g00157 72545

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00157 403 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 14 403 IPR001503 GO:0006486|GO:0008417|GO:0016020
Blo17g00157 403 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 219 397 IPR001503 GO:0006486|GO:0008417|GO:0016020
Blo17g00157 403 PIRSF FucT_plant 1 403 IPR017177 -
Blo17g00157 403 Gene3D - 169 372 IPR038577 -
Blo17g00157 403 PANTHER ALPHA-(1,4)-FUCOSYLTRANSFERASE 14 403 - -
Blo17g00157 403 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 99 397 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00157 K14412 FUT13, FucTC; alpha-1,4-fucosyltransferase [EC:2.4.1.65] - jre:109011840 646.351
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00831 Blo-Chr2:29957294 Blo17g00157 Blo-Chr17:1463821 1.80E-15 dispersed
Blo17g00157 Blo-Chr17:1463821 Blo15g00748 Blo-Chr15:25386504 8.61E-17 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo11g00785 . 84 566 Xyloglucan Fucosyltransferase1 AT1G14080 55.9 8.5e-159 557.4
Blo11g00785 . 84 567 Xyloglucan Fucosyltransferase1 AT1G14100 55.8 7.4e-160 560.8
Blo11g00785 . 81 570 Xyloglucan Fucosyltransferase1 AT1G14110 52.5 4.9e-142 501.5
Blo02g00831 BCT 1 512 Xyloglucan Fucosyltransferase1 AT1G49710 64.3 9.5e-192 666.8
Blo15g00748 BCT 1 538 Xyloglucan Fucosyltransferase1 AT1G49710 58.8 4.9e-180 627.9
Blo17g00157 . 1 403 Xyloglucan Fucosyltransferase1 AT1G71990 69.4 7.8e-165 577.0
Blo11g00785 . 3 566 Xyloglucan Fucosyltransferase1 AT2G03210 55.7 1.4e-180 629.8
Blo11g00785 . 2 564 Xyloglucan Fucosyltransferase1 AT2G03220 61.1 1.7e-202 702.6
Blo03g00764 . 44 525 Xyloglucan Fucosyltransferase1 AT2G03220 52.9 4.9e-149 525.0
Blo11g00785 . 99 566 Xyloglucan Fucosyltransferase1 AT2G15350 52.4 7.2e-147 517.7
Blo11g00785 . 94 566 Xyloglucan Fucosyltransferase1 AT2G15370 52.4 5.9e-144 508.1
Blo11g00785 . 99 566 Xyloglucan Fucosyltransferase1 AT2G15390 54.1 2.9e-151 532.3
Blo02g00831 BCT 1 512 Xyloglucan Fucosyltransferase1 AT3G19280 63.7 9.6e-189 656.8
Blo15g00748 BCT 1 538 Xyloglucan Fucosyltransferase1 AT3G19280 59.2 7.6e-178 620.5
Blo11g00785 . 3 566 Xyloglucan Fucosyltransferase1 AT2G03210 55.7 1.4e-180 629.8
Blo11g00785 . 2 564 Xyloglucan Fucosyltransferase1 AT2G03220 61.1 1.7e-202 702.6
Blo03g00764 . 44 525 Xyloglucan Fucosyltransferase1 AT2G03220 52.9 4.9e-149 525.0
Blo11g00785 . 3 566 Xyloglucan Fucosyltransferase1 AT2G03210 55.7 1.4e-180 629.8
Blo11g00785 . 99 566 Xyloglucan Fucosyltransferase1 AT2G15390 54.1 2.9e-151 532.3
Blo11g00785 . 94 566 Xyloglucan Fucosyltransferase1 AT2G15370 52.4 5.9e-144 508.1
Blo11g00785 . 84 566 Xyloglucan Fucosyltransferase1 AT1G14080 55.9 8.5e-159 557.4
Blo11g00785 . 84 567 Xyloglucan Fucosyltransferase1 AT1G14100 55.8 7.4e-160 560.8
Blo11g00785 . 81 570 Xyloglucan Fucosyltransferase1 AT1G14110 52.5 4.9e-142 501.5
Blo11g00785 . 99 566 Xyloglucan Fucosyltransferase1 AT2G15350 52.4 7.2e-147 517.7
Blo02g00831 BCT 1 512 Xyloglucan Fucosyltransferase1 AT3G19280 63.7 9.6e-189 656.8
Blo15g00748 BCT 1 538 Xyloglucan Fucosyltransferase1 AT3G19280 59.2 7.6e-178 620.5
Blo02g00831 BCT 1 512 Xyloglucan Fucosyltransferase1 AT1G49710 64.3 9.5e-192 666.8
Blo15g00748 BCT 1 538 Xyloglucan Fucosyltransferase1 AT1G49710 58.8 4.9e-180 627.9
Blo17g00157 . 1 403 Xyloglucan Fucosyltransferase1 AT1G71990 69.4 7.8e-165 577.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010578 1 1 1 1 1 1 2 1 1 0 0 1 2 1 1 2 1 2 2 1 1 1 1 1 1 0 1 1 1 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo17g00157 Blo_Chr17 FPKM 12.831326 8.038296 10.298675 9.484228 11.233292 13.619175 11.72728 15.959641 18.742189 18.388687