Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00160 ATGGCTAAAACCCTGCTCAGATTCTTCCATTTTCTCGCAGCTCTGTTCTTCGTTTGCTGTATATTACCTCTATCTGAATCTGTGAATGTGGAGACAAACGCCCTGATGCAATTCAAAAATCAGCTGAAGGATCCGATGAATTTTCTCAGCTCATGGAAAGATTCTGAATCGCCGTGTGAGTTCCTGGGAGTTTCTTGTGATCTGATTTCTGGGAAAGTGACTGAAATTCACCTCGAGAACATGAGTCTCACCGGCGAGATTTCCCCCTCCATTTCGGCGCTGCAGAGGCTTACAACATTTTCGTTGCCCACAAATAATATTTCTGGAGTAATTCCATCCCAGCTGATCGAATGTAGCAATCTTAGAGTATTGAATCTTACTGTAAATGACATGGTTGGAACCATTCCTGATCTTTCTGAACTGAGAAAGTTAGAAGTTCTTGATCTGTCCATAAACTCCTTCAGTGGCGTTTTTCCTTCTTGGGTCGGAAGTTTAACTTCGCTTGTTTCTCTGGGTCTGGGAATGAATGAGTTCGAGGAGTCTGAAATTCCTGAATCTCTTGGAAATTTGAAGAACTTGACTTGGCTATACTTGGCGAATTCAAATTTGATCGGAGAAATTCCTGAATCAGTTTATGCAATGAAGGAATTGAAGACGTTGGATTTTTCAAAAAACAAAATTTCTGGAAGAATTTCCACGTCCATTTCCAAGTTAGAGAATATCAATAAGATTGAGCTCTACGTGAATAATTTGACTGGCGAAATCCCATCGGAGATTGGAAGTCTGGTTCTTCTGCAGGAAATCGACATTTCTGCGAATAAACTGAACGGAAAGTTACCTGATGGAATTGTAAATCTGAAGAATCTGGTAGTCTTTCAGCTTTTTGAAAACAACTTCTCCGGTGAGATTCCGGCGGGGTTTGGAGACTTGCGAAAGCTCATCGGATTTTCTATTTACCGGAATAACTTCTCCGGAAAATTTCCGTCAAATTTTGGCCGGTTTTCACCTCTAAATAGTATCGACATCTCCGAGAATCAATTTTCAGGAGTTTTTCCAAAATTCTTGTGTGAAAATGGAAATTTACAGTACTTGCTTGCTCTTGAGAATAACTTCTCAGGAGAGTTTCCATATTCTTATGCCGAGTGCAAGTCTCTGCAAAGATTCAGAATCAATAATAATCATTTTTCTGGAAAAATCCCAGATGGGTTATGGGGTCTCCCTTCCGCAAAAATTATTGACTTCAGTGAGAATGATTTCAGCGGCGGTATTTCCTCTGAGATTGAACTATCTACCAGTCTGAATCAACTGCTTCTGCAGAATAATCAATTTTCCGGCGATCTTCCATCACAACTCGGCAAGCTGACAAGCTTAGAGAAGCTTCAGCTGAGTGGTAATAAAGTTTCTGGTAAAATTCCATCTGATCTTGGTTCATTGAAGCAGTTATCTTTTCTGTATTTAGAAAATAATCATTTGACCGGATCGATCCCACCGGAGCTTGGTAATTGTGAAAGGTTAGTGGACTTAAATCTTGCTCGGAATTCATTGACCGGAAAAATTCCTCAATCATTTTCATCTATGAGTTCTTTGAACTCGCTAAATCTTTCGATGAACAAACTCACTGGTTCGATTCCAGAAGATTTAGAAAAGATGAAGCTGAGTTCTATCGATTTTTCTGAAAACCAGTTGTCGGGAAAAGTTTCGTCCAATCTTCTGGCCATGAGTGGCGACAAAGCATTTTTAGGGAATATGGCTATTTGCGTTGATGAAAACTACCCTCTCCATTTGAATTCTAGCTTGGAAATCTGCTCTGAAAACCATTCCAAAGAAACCATTCTTAAAAATAAACTGTTTTTGTTCTGCTTAATTGCCTCTGCCTTACTTTCTGTTTTAGCCGTCATCCTGCTAGTTTACTCCAAGTTCTTCAAGCTCCATGATCATGACTTGGACGGAGAAAAAGAGACTTCTCCAAAGTGGAAGCTTTCGTCTTTCCACCACATGGAATTTGACTACGACGAAATATGTAATTTGGAAGAAGCAAATCTGATTGGAAGAGGAGGGACGGGGAGGGTTTATCGAGTAGATCTGAGGAAGAATCGAGGGACAGTGGCTGTTAAAAAGCTTCAGAAAGGCAATCTGAAGAAGGTCTTAGATGCAGAAATGGCAGCTTTAGGCACAATCCGACATCGAAACATATTGAAGCTTTACGCTTGTTTGACGAAAGGAGGATTGAATTATCTCGTATTCGAGTATATGGTCAATGGCAATCTTTTTCAAGCGCTACGAAGACGAAACAATGGAGAAAAGCCTGAATTGGATTGGTATCAGAGGTATAGAATTGCCTTAGGAGCTGCGAAGGGCATTGCTTATTTGCACCATGATTGCACTCCGCCAATTGTTCATCGAGACATAAAATCATCGAACATACTTCTCGATGAAGATTACGAGCCGAAGATTGCCGATTTTGGAGTGGCCAAGATCGTAGGAATGTCTCTAAAGGGTTCTGATTATAGCAACATGGCTGGCACACATGGTTATATCGCCCCCGGTGAGTTTTGCTATGACTTAAAGCGTAAAATTATGTCAAACTTATGTTCTAATTTTTCTTTTGCAGAAGTTGCTTATACTCTCAAAGTCACAGAAAAGAGTGATGTCTATAGCTATGGCGTGGTGTTACTAGAACTAGTGACGGGTCGGAGTCCGATCGACGAAGAATATGGTGAAGCCAAAGACATTGTTTATTGGGTCGTGTCTCATCTTAGCGACCACAAAAATGGCTCTAATGTTATCGACGAGGTTGTTATGAACGACGAGGTTGTTATGAACGAGGTTGTCAGGGACAGCATGATTAAGGTTTTGAAGATTGCGATACTTTGCACGACGAAGCTTCCGGCGGTTCGGCCTTCCATGAGAGGGGTAGTGAAGATGCTCATCGATGCTGATCCTTGCTCTTCGAGGTCTCCCCAGGACGAATAG 2973 41.1 MAKTLLRFFHFLAALFFVCCILPLSESVNVETNALMQFKNQLKDPMNFLSSWKDSESPCEFLGVSCDLISGKVTEIHLENMSLTGEISPSISALQRLTTFSLPTNNISGVIPSQLIECSNLRVLNLTVNDMVGTIPDLSELRKLEVLDLSINSFSGVFPSWVGSLTSLVSLGLGMNEFEESEIPESLGNLKNLTWLYLANSNLIGEIPESVYAMKELKTLDFSKNKISGRISTSISKLENINKIELYVNNLTGEIPSEIGSLVLLQEIDISANKLNGKLPDGIVNLKNLVVFQLFENNFSGEIPAGFGDLRKLIGFSIYRNNFSGKFPSNFGRFSPLNSIDISENQFSGVFPKFLCENGNLQYLLALENNFSGEFPYSYAECKSLQRFRINNNHFSGKIPDGLWGLPSAKIIDFSENDFSGGISSEIELSTSLNQLLLQNNQFSGDLPSQLGKLTSLEKLQLSGNKVSGKIPSDLGSLKQLSFLYLENNHLTGSIPPELGNCERLVDLNLARNSLTGKIPQSFSSMSSLNSLNLSMNKLTGSIPEDLEKMKLSSIDFSENQLSGKVSSNLLAMSGDKAFLGNMAICVDENYPLHLNSSLEICSENHSKETILKNKLFLFCLIASALLSVLAVILLVYSKFFKLHDHDLDGEKETSPKWKLSSFHHMEFDYDEICNLEEANLIGRGGTGRVYRVDLRKNRGTVAVKKLQKGNLKKVLDAEMAALGTIRHRNILKLYACLTKGGLNYLVFEYMVNGNLFQALRRRNNGEKPELDWYQRYRIALGAAKGIAYLHHDCTPPIVHRDIKSSNILLDEDYEPKIADFGVAKIVGMSLKGSDYSNMAGTHGYIAPGEFCYDLKRKIMSNLCSNFSFAEVAYTLKVTEKSDVYSYGVVLLELVTGRSPIDEEYGEAKDIVYWVVSHLSDHKNGSNVIDEVVMNDEVVMNEVVRDSMIKVLKIAILCTTKLPAVRPSMRGVVKMLIDADPCSSRSPQDE 990
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1481424 1484396 + BLOR15981 Blo17g00160 72548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00160 990 SUPERFAMILY Protein kinase-like (PK-like) 666 976 IPR011009 -
Blo17g00160 990 Pfam Leucine rich repeat 504 562 IPR001611 GO:0005515
Blo17g00160 990 Pfam Leucine rich repeat 142 203 IPR001611 GO:0005515
Blo17g00160 990 ProSitePatterns Protein kinases ATP-binding region signature. 682 706 IPR017441 GO:0005524
Blo17g00160 990 CDD STKc_IRAK 682 976 - -
Blo17g00160 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Blo17g00160 990 Gene3D Transferase(Phosphotransferase) domain 1 751 986 - -
Blo17g00160 990 PANTHER UNNAMED PRODUCT 8 988 - -
Blo17g00160 990 Pfam Protein kinase domain 678 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00160 990 SMART LRR_typ_2 165 190 IPR003591 -
Blo17g00160 990 SMART LRR_typ_2 478 502 IPR003591 -
Blo17g00160 990 SMART LRR_typ_2 526 550 IPR003591 -
Blo17g00160 990 SMART LRR_typ_2 141 164 IPR003591 -
Blo17g00160 990 SMART LRR_typ_2 454 477 IPR003591 -
Blo17g00160 990 SMART LRR_typ_2 262 286 IPR003591 -
Blo17g00160 990 ProSiteProfiles Protein kinase domain profile. 676 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00160 990 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 8 988 - -
Blo17g00160 990 Gene3D Ribonuclease Inhibitor 310 600 IPR032675 -
Blo17g00160 990 Gene3D Ribonuclease Inhibitor 27 181 IPR032675 -
Blo17g00160 990 Gene3D Ribonuclease Inhibitor 240 309 IPR032675 -
Blo17g00160 990 Gene3D Ribonuclease Inhibitor 182 239 IPR032675 -
Blo17g00160 990 SUPERFAMILY RNI-like 255 569 - -
Blo17g00160 990 Gene3D Phosphorylase Kinase; domain 1 649 750 - -
Blo17g00160 990 SMART serkin_6 676 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00160 990 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Blo17g00160 990 SUPERFAMILY RNI-like 71 348 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00092 Blo-Chr7:1325846 Blo17g00160 Blo-Chr17:1481424 2.62E-07 dispersed
Blo07g00093 Blo-Chr7:1333554 Blo17g00160 Blo-Chr17:1481424 1.93E-11 dispersed
Blo17g00160 Blo-Chr17:1481424 Blo08g00217 Blo-Chr8:2553633 0 dispersed
Blo17g00160 Blo-Chr17:1481424 Blo18g00170 Blo-Chr18:1634765 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84782 PF00069 Pkinase 4.80E-40 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00160 - - qlo:115975031 1236.09