Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00163 ATGAAGTTTTACTCGCATTTACGGGTCACCGCCGTAGTTGTTGCGGTGGTTGCCGTAGCCATAACAGCACCGTCGGCGGCTCAGAGTCAAGCAAAGGCTGAGTGCGAGAGCAGCTGCGGCGACATCTCCATCCCCTACCCATTCGGTACCACCCAGGACTGCTATATGGAAGAACAATTCCTCGTCGTCTGCAACAAAACCTCAGACCCTCCAAGAGCAACTCTGCAAACATCCTCCATCCAAATCCTCAACATCTCTCTACTGGGTGAGATGACCATCTCAAACCCACGAGCCATGGAGTGTTACTCAGAAGGGAAGATAAATGATCGCCAATACAGATCGATGCTCCTCGGGAGGTTTAGAATCTCATCAACCAAGAACAAATTCACTGTCGTTGGGTGTGACACAATAGGAGTGATTGGTGGCGTTCTAGAAAAGATTTACGCAACTGGGTGCTTCACTTTTTGCAACAATATCACTGACGTGACTAATGGGTCTTGCGCGGGAGTTGGCTGTTGTCAATCTTCACTCCCTGTCGGGGCAAACGATTACAACATATCTCTCGGAAGTGTTTATAATCATACTTTTGTGTCCAGTTTCAATCCATGTGACTACGCTTTCATTGTTCAAGATGGTTGGTACAATTTCTCCACTGCTGATCTTTCTGATCGGAGACAAACTGAAGAGTTCCCAATGGTTCTTGATTGGTCTGTCGGAAACCATACCTGTCAAAAAGCTCGAGAAAATGGAGTTTATGCTTGCATGGGTAATTCAATCTGCGAAGACGCAGATGATGGTTCTGGATACAAGTGTTTGTGTTCTGCTGGTTATAATGGCAATCCTTACCTCGATGACTGCTTAGATATTGATGAATGCAAGAGTTTAAATGACTGCCATGAAAAGGCAATTTGTGAAAATAAAAATGGCGAATACAATTGTTCGTGTCTTGAAGGCTACTATGGCGATGGCCTTAAAACTGGATTAGGCTGTACTGCCAATCAAAAAAACAATACCGTGATGATTGTGGGATTATCAATAAGCACGAGCCTTTTGGCTCTTCTCTCTATTGGATTTTGGATATTGTGGGGAGTAAAACGAAGAAAATTGCAGCAACTGAGACTGAAATTTTTCCATCAAAATGGCGGAACAATGATGCTTCAACAGCTCTCTAACAGAGACGGATCAGGCAACACTGCAAAAATATTCACAGAGGAAGATCTGAAGAAGGCGACCAAGGACTTCCATGAAAGTAGGATTATTGGTCAAGGTGGACAAGGAACAGTCTACAAGGGAATTCTATCAGACAACCAGGTAGTCGCCATTAAAAAAGCTCGAATTGGAGACGAAAGCCAAGTGAAGGATTTCGTCAATGAAGTTGCTTTGCTGTTTAATGTTAGCCATAAGAACGTGGTGAAGCTTTTGGGTTGTTGTTTTGAGACTCAAGTTCCTTCTTTGATCTACGAGTATGTCAGCCATGGCTCTCTCCTCGACCAGCTGATGATGGCCGAAACTACTCCATTTCCATGGGAGCTTCGTTTGAAGATAGCAACAGAAACAGCTGAAGCACTCTGGTATTTACACTCTCAACTCTCCACTCCGATCATTCACAGAGATATTAAAGCAGCAAACATACTTCTTGATATAAATTACACAGCAAAAGTGTCTGATTTTGGAGCTTCGAGATTAATTCAACAAGACAACGAGAGTCAAAAGGATAACACTGCTGTGCAAGGAACAATCGGGTATCTAGACCCGGAGTACATAATAACGCAACAGCTCAACGAAAAGAGCGACGTTTATAGCTTCGGAGTTGTGCTGGTGGAGTTACTCACCGGAAAATCAGTGACTGATTTTAAGTATAAGAATCCAATGAAAAACTTAGTAATTCACTTCCTTTCCTCCTTGACGTTTGGTCGTTTATCAGAGATATTAGACCCACAAATAGCAATCGAGAAGAACTTGCCAGAACTGAAGGAAGTGGCTGCATTGGCAAGAAGATGTGTGAGGGAGAGTGGGCAGGAAAGGCCATCCATGAAAGAAGTGTTGTCTGAGTTAGAAGGATTAAAAGCAGTGAAAAAAACTCGAATTGTCGAAGATGGCGGCGTTGATGTTTACGAAGAGAAGGCATACTTGCTTGGAGATTTCTCCGACGCCATTAAAGGCGAAGCTACTAGCAGTACCACCAGGTATCCGTATGACAGTATAAAGACCCAACTGTCGTTTGATATTGGTGGGGCCCGTTGA 2244 43.72 MKFYSHLRVTAVVVAVVAVAITAPSAAQSQAKAECESSCGDISIPYPFGTTQDCYMEEQFLVVCNKTSDPPRATLQTSSIQILNISLLGEMTISNPRAMECYSEGKINDRQYRSMLLGRFRISSTKNKFTVVGCDTIGVIGGVLEKIYATGCFTFCNNITDVTNGSCAGVGCCQSSLPVGANDYNISLGSVYNHTFVSSFNPCDYAFIVQDGWYNFSTADLSDRRQTEEFPMVLDWSVGNHTCQKARENGVYACMGNSICEDADDGSGYKCLCSAGYNGNPYLDDCLDIDECKSLNDCHEKAICENKNGEYNCSCLEGYYGDGLKTGLGCTANQKNNTVMIVGLSISTSLLALLSIGFWILWGVKRRKLQQLRLKFFHQNGGTMMLQQLSNRDGSGNTAKIFTEEDLKKATKDFHESRIIGQGGQGTVYKGILSDNQVVAIKKARIGDESQVKDFVNEVALLFNVSHKNVVKLLGCCFETQVPSLIYEYVSHGSLLDQLMMAETTPFPWELRLKIATETAEALWYLHSQLSTPIIHRDIKAANILLDINYTAKVSDFGASRLIQQDNESQKDNTAVQGTIGYLDPEYIITQQLNEKSDVYSFGVVLVELLTGKSVTDFKYKNPMKNLVIHFLSSLTFGRLSEILDPQIAIEKNLPELKEVAALARRCVRESGQERPSMKEVLSELEGLKAVKKTRIVEDGGVDVYEEKAYLLGDFSDAIKGEATSSTTRYPYDSIKTQLSFDIGGAR 747
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1521023 1523892 + BLOR15984 Blo17g00163 72551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00163 747 CDD STKc_IRAK 420 688 - -
Blo17g00163 747 ProSiteProfiles EGF-like domain profile. 239 287 IPR000742 -
Blo17g00163 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Blo17g00163 747 Gene3D Phosphorylase Kinase; domain 1 386 489 - -
Blo17g00163 747 SMART egfca_6 288 331 IPR001881 GO:0005509
Blo17g00163 747 SMART serkin_6 414 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00163 747 Pfam Protein kinase domain 414 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00163 747 SUPERFAMILY Protein kinase-like (PK-like) 398 686 IPR011009 -
Blo17g00163 747 ProSiteProfiles EGF-like domain profile. 288 322 IPR000742 -
Blo17g00163 747 ProSiteProfiles Protein kinase domain profile. 414 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00163 747 Pfam EGF domain 296 324 IPR024731 -
Blo17g00163 747 ProSitePatterns Calcium-binding EGF-like domain signature. 288 313 IPR018097 GO:0005509
Blo17g00163 747 Gene3D Transferase(Phosphotransferase) domain 1 491 705 - -
Blo17g00163 747 Pfam Wall-associated receptor kinase galacturonan-binding 35 89 IPR025287 GO:0030247
Blo17g00163 747 Gene3D Laminin 281 327 - -
Blo17g00163 747 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 22 726 - -
Blo17g00163 747 SUPERFAMILY EGF/Laminin 288 323 - -
Blo17g00163 747 CDD EGF_CA 288 322 - -
Blo17g00163 747 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 726 IPR045274 GO:0007166
Blo17g00163 747 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 304 315 IPR000152 -
Blo17g00163 747 ProSitePatterns EGF-like domain signature 2. 271 286 IPR000742 -
Blo17g00163 747 SMART egf_5 291 331 IPR000742 -
Blo17g00163 747 SMART egf_5 242 287 IPR000742 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01658 Blo-Chr1:56342732 Blo17g00163 Blo-Chr17:1521023 0 dispersed
Blo02g00404 Blo-Chr2:5018484 Blo17g00163 Blo-Chr17:1521023 1.67E-130 dispersed
Blo02g00407 Blo-Chr2:5301206 Blo17g00163 Blo-Chr17:1521023 1.83E-12 dispersed
Blo17g00163 Blo-Chr17:1521023 Blo18g00827 Blo-Chr18:24383066 2.09E-68 dispersed
Blo17g00161 Blo-Chr17:1487430 Blo17g00163 Blo-Chr17:1521023 5.48E-63 proximal
Blo17g00162 Blo-Chr17:1488894 Blo17g00163 Blo-Chr17:1521023 6.18E-08 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84783 PF00069 Pkinase 1.10E-48 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00163 - - csin:114268081 713.375