Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00165 ATGGAAGGTCCTCACGTTCTCCACCGCCATCACCGCTATCCAAGGTCTGTTCCTCTTTCTTCTGCTCCTCCATCGGATTTTCCTCCCCATCCTAATCGCTACTTGCCGCCGCACAATCCTGATAATCATGTCTTTTCTCATCTTCCGCAACCGCAATCGTTGCATCCTCCCCCTCCTCCTCCGCTGCCTTTCTATCACCCGCTCGATACCCCTCCTTCGCTTATGAGCCGTTATCATTCTAATCAGTTTACTTTCCCTTCCTACGATCACAACAACCGCCTTCTTACTGAGGGCGATCCATCCGGTGTTGTTAACTTCTCTGGCTTTCGCGATTTCACCACACATTCTCCTCGTATTTTTGGTAATGATGATTGGTCCCATACAAGGGGTCAGTCGAGAATTGACGCTGATAGTATACCCGTCATGCAGCATTCGCCTGGTGATTTTGAGCGTCAATTAATTAATCGTCAATTTTATTGCACACCTGACACAGCGTATCAGACTGTAGATAGGGTAAGGGGTTTAGAGGGTAATTCTAGGTTTAGGGTGGATTACAATGATGAGCTTATATCGAATTATAGGGAAGAGCACGGGCACAGGGGCAACAATGAAAATTATCGTGTTCGTCCTCAAAATGCACCGGAAGTTGTCACATCTTTTCATGACCTTAGTTTTGTAAAAGATCAGACTTCATTACGCAGTGATATTGAATTGAGCTCGGGAGGCTTTAATGACCGAAGCAGTTCAATGTGCGACAGTGAGTTAGTCAGGAGTGGTAGAATTGATGGTTCTTATGAAATCAAAAGACAAATTGCTAGAGGTGTTCCTAATTCGTTGTTTCAAATGGAAAATAACACAATTGGTAACAATGAGTGGTTTCGAATGGCACCTGGTAAGCGTGGGCATCATGGTTCAGAAGTGGGAAGGTATACCAGTGCTAATAGGGGCGGTGGAGAAAGCAGCCATCAATTCCATGACACTCCAAGAAAGCAAGGGCAGAAGAAGAGTGCTTTTCTTAGGCTTCAAATTGCAAAACGTAATCGCAGTGATATAGAAGATGAGATGCATTATTTAGATAAATTTGAGAAGAAGAGCTTTGGTTACTTTACAGGTAAAGATCAGAATGGATACAGGGGTGTCAAAATGGAAAAGGTGGAAGAGCTAGAGGGAAGTCATGTGGAGCTTGATATTTCATTTAAGTCCAATTCTTTAGTAGCCAAAGCAGTCGCTTCGTCTTCAACTTCAAGTCCTGTGACTAAGTCCAATGCAATTCCAACATGTAGTTATAATAAAGTCAAGAATCTTTGTACACCTGACAGACCAAGTAAATTGGCTCGGAAAACTATAGATATCAATGATGATATCAATGATTCAACACGTCGTGTGAATAACTTTTCTGCGGTTTGTAATCTGTTAAAACACAAATCAAAGTTTTCTTCCAGCGTTGAATATGGTTTGGGTGAAAATGTGGAAGCTGTTGACTCTACGATGGCTGTCGTCTCGAATAAAGAAATTAGTGCTGTTGGTTGTTCTAAAAGACACTCCTCTGGGAACATCAAAAAGAAAAAGAATGTGAGGAAATTAGTGAAGGTAGTCAACCCTTATTTATGTGCAGAAAATTCTCATTCTACAAGAAAGCAAGATGAAAATGTCAACTCTGCTGATATTGCCCCTGGAGCCTTTGAGTCTGATTTGAGTGGAAAACCATCAAGAGGACAGAGTATTTCTTCTGGCATTGCTGTAAAGCCTAATGTTGATTTGAACTCATGTTTGGATAGTCCTAATATATTTCTTGAAGATAGAGTAGTATGTGATGCTCCTGTGGCTATGGTGTCAGAGAAATGTAAAACTGATACTAATTTTAATGAGGAACATGTACCGATAATTCAGGTAAAAGATAACATGTCAGACGCTTTCCATGGTTCTTCAAGCTTCGGTGAAATGATAGATACTGACCTTCCTGTGATTGAAGATAATTCAGTTGATATATTGAATACTGAGACAGTTATATTACCTAAGAATTCTGCTCTGTTAGATAGTGATAGTGCAAAGGTTGAAAGATTTCTTGGTCACAAAAAAAAAGGCTCTTTGTTATGTGGAAATAAGGTTAGAGATGAATTTCAAGATCCTATATCTGTTGGTGAAGGGAACCTTAAATTCGATTTGGAAAATTGTGGGGAAATAAAAGCTGATAAATGTGATGAAAAAAATGAAGTTCCTTACTCAGGAACCATTGATGGTATTAACAAGCAACTTCAATCAAATCAGGAGGCCGTAATCCTTCGGGATGACGACACTAAAGAAATGACAGCAGCTAAATTTTTGGTAGGCAATAGTGAACTTGTTTGTTTGTTACCAGCTGATGAAATTAGAGTGCATAATAATTCTATGGCTGCAAACTACTCCAACGACCACCAGGGTTCATGTTGTGACAATAGTGGTACCAACTTTATAGAGAATGGAGTTATTAACTGTTCGGGAACTGATTATGCAGTAGAAGAGCTATCTCCAAATCCTTTTGTTCTATCATCGGATAATGTTTTAGTCAAAATGTCTCCTGTGCATACAATTCCTTTTGCAGGCAGCAAAGAAACTGTTAATAAGAAGGGACTGGTTTCAACTCATTCAAACTTTTCATGTTCAGGCGACCTAGATGTGGACCCTGCAGATTCAAAAACATTGAGTTTATCTTTGAAAGATTCTAGCCAGATCTCAGTTTCTAGGTTTGGAAATATGGCTTGTGGCAAAGAACCTGATAGTATGGGGCTTGGCATTATGCATAAAAACAGCTTATCGGATAAATTGTGTGAGACTAAAAATGAAGTCAGTCGTGCTATGGAGAATGGTTCCAGTGAGAGGTCACCTAGATTTAGAAAGAAGAGGAAAGTGTCCGTCAACTCTCCCTATTTACCTTTTCCTCGGGAGATTAATGAGGGTTCTGCAAATATTTTAACAGGTTGTCCAGTTGTTCAGTTAAGTTCTAATATTGAACCAATAAAACGAGAAGTTAAAATTGTGACATCTAGCAATGATGATCTATATGAAGATAGTTCTATGCCTTGCAGAGATGAGGGTAGTTTGGATCTTGATTTAGATTTTTCTAGGGAATTGTTTGGTACTGTAGTTGCTTGTAGTGATCCTTTGACTGGTATCAATGACTTGAAACCTGGGACTTCTAGTGTTGACTCTCATCTAGTTCTGGACAATTTAATCCATCCACAAGTGCATTCTAGTGCTTCATTAACATTTAGAAATGGGCATGGAGCCAATGCCACTAAAGCTTCAGAAGAAAGTAATCAAAATCAAACCAACTTCATGGAAACAGAAATGGGAAGCAAAGAAAAGATTGCGCATGTTGACGGGAGAGATGTGATTTATGCTAAGAGTGTGCTAAGAGAGTCTCCTGATGAATATCATCAATCTCCAGTTTCAGGTCAAGAGGTAGTGAATGAGGAATCTGATCATCTTCCAGTGAAGGATGACTTGCATTGTCTTGCAGATTATCTGCATTTATCTTCTGATGGAAATGAGGGGTCTGCTGTTAACTCTAGTGATGAAGTAGCTGGGTTTGTGATTGATGGACTATCAAATATGGCCTCCCCTGAAACTGGTTCTGATGCCACTGACAAATGCATGTTGAATTCTGAACCATCACTCGCCCAAGCATTTCTTGAAAAGGTTGTGGATTACAAAAGCAGAGAAGAGAAATCTCTAATTGAAAGTCAACCAAAGAAACATGCTCAAGCTTTACTTTTCCCATCTAGCAATGTTAATCTTAATTCAGGTAGTGTAAAATTACCTCCGGTATCACAGGTGTCCAAAAGTGCCTTTAACGATAGGAAGCTCGTGACTGCTAAATCAATGATTAATAAAAAACATCTTGGTCATACCATATCCAGGGGCTTTTCCTGCCACTCAACTTTCTTGTATGGTACTTCAAAGAAGTTTGCCTCTTCAATAGCTTCTGTGAAGTCTAGGACTTGGCATCGAGCGGATAATTCTTCTCCTCTTCCCCTACCAGGGAACAAGCCTTGCTCAAGTGCAGTTCCTTCCCTAAGACAATTTTCAGGAAGCAATGGGGTTCACCAGAATTCTTACATTCGCAAGGGTAACAGTCTTGTAAGAAAATCTTCCCCTGTTTCTGGTATACCTCGTGGTTCTAATGCTGTGAATTTATTTACGTCCCAGTTAAACTCTTTTAATGCTGAAGAATTGAGGAATGATGTGAAATCTGAGAGTCTGGTTGGTGTAACTGATTCTTCTATTAATTTGGGGATCAAAGTAACAGAAAATCCTGCCAATAAGCTAGGAATACCCCCAGTTCTTAGTAGTCCCGACACTCTTTCGTCTGGGGGTTGTGCACCATCCACGATAGCAGAGCCGCTTCTTAATGATTCCTCAGATTTTATAAAGCTGAGAACTATGGAAGAGTCCGCTTCTTTTAAGGATTTATTGAAGAATTCTGATGAGCATGAAAATCTGGTTTTTCTGAACATGGAAAATCGGACTGATCTTAGTAACGAGTTTTTAGCATCTTCGAATCTGGAACAAGGAGCACATGCAAAGTGCAATTTAAATCAATTGGTTTCGACTTCTAATCCTTGTGATCTCAGCAGTACAGATAAGGTCCAACCTATAACCTCTGATGGATATTACAAGAGAAGAAAAAATCAACTAATTCGGGCTGCACTTGATTCTAGTGTTAGTCAGACTCTGATGTCACCTCTATCTGACAAGATTTTCAATTCAGAGCTGGAATATATTGCTAAAGATATTCCTTGCAAGAGTTATACTGGGAGGCGGTTGGCCAAAGGTATGGCAAAGGAAAGAAGGCCTGGAAAGTTATCTTTGGTATGGTCACTCTGTGGTTCAATGTCCTCAAAGTATGGGAGTAATAATTTGAATGGCCAGAAGATGGTACCACATCTTCCTTGGAAAAGAACATATAGGAGAAGTCAAGTGCGCAACGTAGCCGCCATTCCTTATTATACACTGTCAACAATCAGTAAAAGGTTGCTGTTGTCAAGAAAGAGGGAGACACTGTATACGACATCAAATAATGGGTTTTCACTTAAGAAATCCAAAGTATTAAGTGTTGATGGGTCTAGTTTAAAATGGTCAAAATCCATTGATAGGCGCTCAAAGAAAGCTAACGAGGATGCTACACTAGCAGTTGCTGCAGCAGATAGAAATAAAAGAGAGCAAAATGGGCTTGCTCGTGTTATTAACAGGACAGACAATAATAGTGGCAGTTCTTCCCATGACGAACCATCTTGCTCTACTGCTGTCAAGTCTGGGAAGAATGCTAAGATGCCTTACGCCCCCAGGAGATTAGTGATTGGAAATGATGCATATGTTAGAATTGGGAATGGGAATCAGCTCGTAAGAGATCCAAAAAAGCGAATCCGGCGATTGGCTAGTGAGAAAGTTCGATGGAGTTTGCACACAGCAAGAAAGCGGTTAGGCAGGAAGCAGAAATATTGTCAGTTCTTCACTAGATTTGGCACATGTGATAAGAATGATGGGAAGTGCCCTTATATCCATGATCCTTCTAAAATTGCCGTGTGCACAAAATTTTTAAATGATGCTTGTTCTGATGTCAACTGCAAATTGACTCATAAGATCATTCCAGAAAGAATGCCGGATTGCTCATACTTTTTGCAAGGTTTATGCACCAACAAAAGTTGTGCTTATAGACATGTGAATGTGAACCCAAAGGCTTCCACATGCGAAGGATTTCTCAGAGGCTATTGCGCTGATGGTGATGAGTGCCGTAAGAAGCACAGTTATGTATGCCCAGTGTTTGAAGCTACAGGATCCTGCTCCGAGTCCAAATGCAAACTTCACCACCCAAAAAGAAGAAATGAAGGAAAAAAGCAGAAGCGATCAGGGGAGCTCAAGAATGATAGCGGGCGTTATTTTGCATCCGTGCCTAGCAATTCTACAGAGCCGGAGAAGCTTTCGATGCAGAGTGCCAAAGTTTCTCTAGAAGGGGATTATATCACTCTGGATGTCAGTGACGTTGAAAGTGGAGATGTTGGCGGCGATCAGAACTTAGATTTGCAGTTAGAAGATCTTGATGAGAGAGATGGATGCATCGTAGGAGAAAAAATGAAAGTAGGGTTGAATGGTAAAATAATGGGGAATTGGGATTGGAGAATTTATGCGGGTCCGCCGTTGAAAGGCAGAGGCGGTGGTGGTATTCGAATTCGAAACCAGATCTCTGATCCCAGCCATGGTTTTTAG 6246 40.51 MEGPHVLHRHHRYPRSVPLSSAPPSDFPPHPNRYLPPHNPDNHVFSHLPQPQSLHPPPPPPLPFYHPLDTPPSLMSRYHSNQFTFPSYDHNNRLLTEGDPSGVVNFSGFRDFTTHSPRIFGNDDWSHTRGQSRIDADSIPVMQHSPGDFERQLINRQFYCTPDTAYQTVDRVRGLEGNSRFRVDYNDELISNYREEHGHRGNNENYRVRPQNAPEVVTSFHDLSFVKDQTSLRSDIELSSGGFNDRSSSMCDSELVRSGRIDGSYEIKRQIARGVPNSLFQMENNTIGNNEWFRMAPGKRGHHGSEVGRYTSANRGGGESSHQFHDTPRKQGQKKSAFLRLQIAKRNRSDIEDEMHYLDKFEKKSFGYFTGKDQNGYRGVKMEKVEELEGSHVELDISFKSNSLVAKAVASSSTSSPVTKSNAIPTCSYNKVKNLCTPDRPSKLARKTIDINDDINDSTRRVNNFSAVCNLLKHKSKFSSSVEYGLGENVEAVDSTMAVVSNKEISAVGCSKRHSSGNIKKKKNVRKLVKVVNPYLCAENSHSTRKQDENVNSADIAPGAFESDLSGKPSRGQSISSGIAVKPNVDLNSCLDSPNIFLEDRVVCDAPVAMVSEKCKTDTNFNEEHVPIIQVKDNMSDAFHGSSSFGEMIDTDLPVIEDNSVDILNTETVILPKNSALLDSDSAKVERFLGHKKKGSLLCGNKVRDEFQDPISVGEGNLKFDLENCGEIKADKCDEKNEVPYSGTIDGINKQLQSNQEAVILRDDDTKEMTAAKFLVGNSELVCLLPADEIRVHNNSMAANYSNDHQGSCCDNSGTNFIENGVINCSGTDYAVEELSPNPFVLSSDNVLVKMSPVHTIPFAGSKETVNKKGLVSTHSNFSCSGDLDVDPADSKTLSLSLKDSSQISVSRFGNMACGKEPDSMGLGIMHKNSLSDKLCETKNEVSRAMENGSSERSPRFRKKRKVSVNSPYLPFPREINEGSANILTGCPVVQLSSNIEPIKREVKIVTSSNDDLYEDSSMPCRDEGSLDLDLDFSRELFGTVVACSDPLTGINDLKPGTSSVDSHLVLDNLIHPQVHSSASLTFRNGHGANATKASEESNQNQTNFMETEMGSKEKIAHVDGRDVIYAKSVLRESPDEYHQSPVSGQEVVNEESDHLPVKDDLHCLADYLHLSSDGNEGSAVNSSDEVAGFVIDGLSNMASPETGSDATDKCMLNSEPSLAQAFLEKVVDYKSREEKSLIESQPKKHAQALLFPSSNVNLNSGSVKLPPVSQVSKSAFNDRKLVTAKSMINKKHLGHTISRGFSCHSTFLYGTSKKFASSIASVKSRTWHRADNSSPLPLPGNKPCSSAVPSLRQFSGSNGVHQNSYIRKGNSLVRKSSPVSGIPRGSNAVNLFTSQLNSFNAEELRNDVKSESLVGVTDSSINLGIKVTENPANKLGIPPVLSSPDTLSSGGCAPSTIAEPLLNDSSDFIKLRTMEESASFKDLLKNSDEHENLVFLNMENRTDLSNEFLASSNLEQGAHAKCNLNQLVSTSNPCDLSSTDKVQPITSDGYYKRRKNQLIRAALDSSVSQTLMSPLSDKIFNSELEYIAKDIPCKSYTGRRLAKGMAKERRPGKLSLVWSLCGSMSSKYGSNNLNGQKMVPHLPWKRTYRRSQVRNVAAIPYYTLSTISKRLLLSRKRETLYTTSNNGFSLKKSKVLSVDGSSLKWSKSIDRRSKKANEDATLAVAAADRNKREQNGLARVINRTDNNSGSSSHDEPSCSTAVKSGKNAKMPYAPRRLVIGNDAYVRIGNGNQLVRDPKKRIRRLASEKVRWSLHTARKRLGRKQKYCQFFTRFGTCDKNDGKCPYIHDPSKIAVCTKFLNDACSDVNCKLTHKIIPERMPDCSYFLQGLCTNKSCAYRHVNVNPKASTCEGFLRGYCADGDECRKKHSYVCPVFEATGSCSESKCKLHHPKRRNEGKKQKRSGELKNDSGRYFASVPSNSTEPEKLSMQSAKVSLEGDYITLDVSDVESGDVGGDQNLDLQLEDLDERDGCIVGEKMKVGLNGKIMGNWDWRIYAGPPLKGRGGGGIRIRNQISDPSHGF 2081
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 1666085 1674761 - BLOR15986 Blo17g00165 72553

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00165 2081 PANTHER CCCH ZINGC FINGER 382 2028 - -
Blo17g00165 2081 MobiDBLite consensus disorder prediction 1 67 - -
Blo17g00165 2081 ProSiteProfiles Zinc finger C3H1-type profile. 1904 1931 IPR000571 GO:0046872
Blo17g00165 2081 Gene3D - 1905 1965 - -
Blo17g00165 2081 ProSiteProfiles Zinc finger C3H1-type profile. 1877 1903 IPR000571 GO:0046872
Blo17g00165 2081 MobiDBLite consensus disorder prediction 1740 1765 - -
Blo17g00165 2081 Gene3D - 1850 1904 - -
Blo17g00165 2081 MobiDBLite consensus disorder prediction 21 36 - -
Blo17g00165 2081 MobiDBLite consensus disorder prediction 1952 1987 - -
Blo17g00165 2081 MobiDBLite consensus disorder prediction 51 67 - -
Blo17g00165 2081 SMART c3hfinal6 1931 1952 IPR000571 GO:0046872
Blo17g00165 2081 SMART c3hfinal6 1822 1850 IPR000571 GO:0046872
Blo17g00165 2081 SMART c3hfinal6 1904 1930 IPR000571 GO:0046872
Blo17g00165 2081 SMART c3hfinal6 1877 1902 IPR000571 GO:0046872
Blo17g00165 2081 MobiDBLite consensus disorder prediction 299 335 - -
Blo17g00165 2081 MobiDBLite consensus disorder prediction 1734 1767 - -
Blo17g00165 2081 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3 382 2028 - -
Blo17g00165 2081 ProSiteProfiles Zinc finger C3H1-type profile. 1822 1851 IPR000571 GO:0046872
Blo17g00165 2081 MobiDBLite consensus disorder prediction 1973 1987 - -
Blo17g00165 2081 MobiDBLite consensus disorder prediction 542 574 - -
Blo17g00165 2081 MobiDBLite consensus disorder prediction 941 960 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00165 - - - jre:109004825 974.541
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo14g00451 Blo-Chr14:5381653 Blo17g00165 Blo-Chr17:1666085 4.73E-08 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g208 . . . . . . . . . . Cma01g01036 . Car01g00911 . . . . . . . . . . . . . . . . . . Cone4ag1435 Cone7ag1500 . . . . . . Blo17g00165 . . . . Bpe14g00400 . Bma02g00201 . Cmo01g01075 . . . . . . Cpe02g00855 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003643 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 0 2 2 1 2 3 12 1 45
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo17g00165 Blo_Chr17 FPKM 12.960367 13.76611 58.569546 55.986378 20.294073 19.614609 23.515486 63.147594 58.749397 62.742245