Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo17g00181 | ATGGACGAACAAAATCTCCCTGCAAACCATGGTCGGATTTTAAACAAGATAAAACCATATGTTCTAATGGTGAGCCTGCAGTTCGGTTCAGCCGGGATGTACATCATTAGCATGGCAACGTTGAACCACGGCATGAGCCGTTATGTCCTTATCGTGTATCGAAATGCTGTCGCGGCTCTCGTTCTCTCTCCTTTTGCTCTCGTTCTCGAAAGGAAAACAAGGCCGAAGATGACACTCCCAGTCCTTCTGCAGATCATAGCACTTGGGTTTTTAGAGCCAATCCTTGATCAAGGCTTTGCTTATTTGGGAATGCAATACACGTCTGCATCATATACTTCTGCCATTATGAATGCTGTACCTTCGGTCACCTTCATTCTTGCTGTTATTTGCCGGATGGAGAAAGTGAATTTGAGAGAGATAAGGAGCCAAGCGAAAGTGATGGGGACAATAGTGACCTTTGGAGGGGCATTGCTAATGACCCTCTACAAGGGGCCAGTCCTCCATTTTCTCTGGTCTTCAGAACCCTCCCACCACTCTGATAGCAGTGCTTCCTCTCCCAAACACTGGGTTTCTGGAACGCTCTTCATTCTCTTAGGCTGTGTCGCCTGGTCTGCCTTCTTCATCTTGCAGTCCGTGACAGTGAAGAAATACCCTGCAGAGCTCTCTCTTTCATCTCTGATATGCTTGTCTGGCGCCATGCAAAGCACCGTCATTGCTCTTGCGTTGGAGCATAGCCCTGAGGCTTGGTCCTTGGGCTGGAACTCCAGGCTTCTTGCTCCCCTCTACACTGGAATTGTAAGCTCAGGGGTGACATATTATGTGCAAGGACTGGTGCTGAAAACTAGAGGGCCTGTTTTTGTCACCGCCTTCAATCCTTTATGCATGATCCTTGTCTCTATTATGGGCTCCCTCATTTTACTCGAAAAGCTACATCTTGGAAGTGTAATTGGAGGCATTGTCATAGCACTTGGGCTTTATGGAGTGGTGTGGGGCAAAAGCAAGGATTATTCAAACCCACAGCCACCCACTACTTGTGAGAAGGCTTGTTCCCCGCAAGAACTGCCACTTTCCTCTGCAGACGTCTTCGTGAAAAAATGA | 1098 | 47.81 | MDEQNLPANHGRILNKIKPYVLMVSLQFGSAGMYIISMATLNHGMSRYVLIVYRNAVAALVLSPFALVLERKTRPKMTLPVLLQIIALGFLEPILDQGFAYLGMQYTSASYTSAIMNAVPSVTFILAVICRMEKVNLREIRSQAKVMGTIVTFGGALLMTLYKGPVLHFLWSSEPSHHSDSSASSPKHWVSGTLFILLGCVAWSAFFILQSVTVKKYPAELSLSSLICLSGAMQSTVIALALEHSPEAWSLGWNSRLLAPLYTGIVSSGVTYYVQGLVLKTRGPVFVTAFNPLCMILVSIMGSLILLEKLHLGSVIGGIVIALGLYGVVWGKSKDYSNPQPPTTCEKACSPQELPLSSADVFVKK | 365 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 17 | 1847688 | 1849488 | - | BLOR16002 | Blo17g00181 | 72569 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo17g00181 | 365 | Pfam | EamA-like transporter family | 191 | 329 | IPR000620 | GO:0016020|GO:0016021 | |
| Blo17g00181 | 365 | Pfam | EamA-like transporter family | 21 | 160 | IPR000620 | GO:0016020|GO:0016021 | |
| Blo17g00181 | 365 | PANTHER | WAT1-RELATED PROTEIN | 13 | 349 | - | - | |
| Blo17g00181 | 365 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 53 | 163 | - | - | |
| Blo17g00181 | 365 | PANTHER | WAT1-RELATED PROTEIN | 13 | 349 | IPR030184 | GO:0016021|GO:0022857 | |
| Blo17g00181 | 365 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 249 | 333 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Blo12g00672 | Blo17g00181 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo12g00364 | Blo-Chr12:19864614 | Blo17g00181 | Blo-Chr17:1847688 | 5.90E-89 | dispersed | |
| Blo12g00672 | Blo-Chr12:25021362 | Blo17g00181 | Blo-Chr17:1847688 | 4.07E-103 | dispersed | |
| Blo13g00756 | Blo-Chr13:30324989 | Blo17g00181 | Blo-Chr17:1847688 | 8.24E-108 | dispersed | |
| Blo17g00181 | Blo-Chr17:1847688 | Blo13g00658 | Blo-Chr13:29303869 | 2.85E-122 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo17g00181 | - | - | rcu:8274104 | 515.768 |