Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00214 ATGGCTGCTGCTGTATTTCATCAACCAGTTGGGAGTCTTCACTCCCACGGGCAACTTTGTAAGTCTCCCCTTCATCAAGAACTTCATTCCAAGGTCTTTAAAATTGAAATTGGAATGCCAAGAGGAAAATATTCTCGATCTTTTCGAGCAAATTTCGGCGGAATTGAAGCATCTATTTCCCAAACTTCTGTTTTCGATTCTGTTTCATCTCCCTCGATCAAAACCACCAACGACTCGCGTAAAAAATCAAATGAAGCTGCACTGATTCTGATCCGCCATGGAGAATCATTATGGAACGAGAAAAACTTATTCACAGGCTGTGTGGATGTGCCACTTACGAAGAAAGGTGTCGAAGAGGCCATCGAAGCTGGCAAGAGAATCAGCAACATTCCTGTCGACATGATCTTCACGTCTGCTCTAATTCGTGCTCAAATGACTGCCATGCTCGCAATGACTCAACACCGTCGTAAAAAGGTTCCAATTATTATCCATGATGAAAGTGAGCAAGCAAGGGTATGGAGTCAAATTTTCAGCGAAGAAACAAAAAAGCAGTCGATTCCGGTCATAGCTGCTTGGCAATTAAATGAAAGAATGTATGGAGAATTACAAGGTCTTAATAAGCAAGAAACGGCAGACAGATATGGGAAAGAGCAAGTTCACGAGTGGCGTCGAAGCTATGACATACCTCCCCCTAATGGCGAGAGTTTGGAAATGTGCGCCGAAAGAGCAGTTGCTTATTTCAACGAACAAATCGAGCCTCAACTTTGCTCTGGAAAGAATGTAATGATTGCTGCCCATGGAAACTCATTGAGATCTATCATTATGTATCTTGACAAATTAACTTCCCAAGAGGTGATTAGTCTTGAACTATCGACGGGAATACCGATGCTTTATATTTTCAAAGAAGGAAAATTCATCCGGAGAGGAAGTCCGGCTGGACCCTCTGAGGCCGGGGTTTATGCGTATACTAGGAATATTGGGGCATCAAACCGTGACGATGCCTTTTATAGATATAAGATGCCAAAAATGATTACCAAAATTGAAGGAAGAGGTAATGGCATCAAGACCAATGTGGTTAATATGGTTGAGATTGCAAAAGCATTGGCTAGACCTGCTTCTTACACTACCAAGTTTTTTGGTTGTGAGCTTGGAGCACAGTCCAAGTTTGACGAAAAGACTGGCACGTCATTGGTGAATGGTGCTCATGACACAGCAAAGCTTGCTGGTCTTCTTGAGAATTTCATCAAGAAGTATGTTCAATGCTATGGTTGTGGGAACCCTGAAACTGAAATTGTCATCACGAAGACACAGATGATCACATTGAAATGTGCTGCATGTGGGTTCCTTTCAGATGTTGACATGAGGTGCAAGCTTACAACATTTATTCTCAAGAACCCACCTGAGTCTAAAAAGTCGTCAAAAGATAAGAAAGCTATGAGGAGGGCTGAGAAGGAACGACTTAAAGAGGGTGAGGCTGTAGATGAGGAACAGAAGAAGCTGAAGAAGGAAGCAACGAAGAAGAAAAGCACTTCTAGTAGCACAAAAGATGGGGTTTCCAGAACATCAAGTAAGAAGAAAAATAATGCTTCTGATGAGGAACATTCCCCAGCTCACAGTCATTCTGATGATGATGACCAACCAAATGCTGATGATGACAATGACAATGATGTCCAGTGGCAGACAGACACATCACTGGAGGCTGCCAGGCAGCGTATCCAGGAGCAGCTGAGTGCTGTAACTGCTGATATGGTGATGCTTACTACTGAGGAAGAGAAGCAGAAGTCAAAGAAGTCTCCAGAACAGGAAAACGCATCTCAGAGTAATGGGCGTGAGAAAGGAAATGGTGTCTCTTCCCATGGAAAGCTCGTTAATGAAATAAGGGCATACTCAAAGAAAGGTTCTCCTGCATCCCAGCTGAAATCGTTTTTAAATTCTCTAGCAGGTACTCCACAAGAAGTCATGGATGCCCTTCTTGAAGCTCTTTTTGAAGGTGCTGGAAAGGGTTTCTCTGAAGACGTGGTGAAAAAAAAGAGTTATCTTGCCGCAGCTGTTCAAGAGGAAGGATATCAGGCAATTCTGTTGGGTGCTATTGAGACCTTCTGTTTGAAGGCAAACCCTGAAGCTGGACGAGAGGTGGCACTGGTTTTGAAAGCTCTCTACGACAACGATGTGTTGGAGGAGGAGTTTATAGTAGCCTGGTACCAGCAGGGATTGAAAGGCAGCAATAAGAGTTCCCCGATATGGAAGAATGTGAAGCCCTTTATTGAGTGGCTCCAGAGTGCCGAGTCAGAGACCGAAGACGAGTGA 2307 43.65 MAAAVFHQPVGSLHSHGQLCKSPLHQELHSKVFKIEIGMPRGKYSRSFRANFGGIEASISQTSVFDSVSSPSIKTTNDSRKKSNEAALILIRHGESLWNEKNLFTGCVDVPLTKKGVEEAIEAGKRISNIPVDMIFTSALIRAQMTAMLAMTQHRRKKVPIIIHDESEQARVWSQIFSEETKKQSIPVIAAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAERAVAYFNEQIEPQLCSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGKFIRRGSPAGPSEAGVYAYTRNIGASNRDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVEIAKALARPASYTTKFFGCELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIVITKTQMITLKCAACGFLSDVDMRCKLTTFILKNPPESKKSSKDKKAMRRAEKERLKEGEAVDEEQKKLKKEATKKKSTSSSTKDGVSRTSSKKKNNASDEEHSPAHSHSDDDDQPNADDDNDNDVQWQTDTSLEAARQRIQEQLSAVTADMVMLTTEEEKQKSKKSPEQENASQSNGREKGNGVSSHGKLVNEIRAYSKKGSPASQLKSFLNSLAGTPQEVMDALLEALFEGAGKGFSEDVVKKKSYLAAAVQEEGYQAILLGAIETFCLKANPEAGREVALVLKALYDNDVLEEEFIVAWYQQGLKGSNKSSPIWKNVKPFIEWLQSAESETEDE 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2151219 2159893 - BLOR16035 Blo17g00214 72602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00214 768 SUPERFAMILY ARM repeat 621 762 IPR016024 -
Blo17g00214 768 SMART eIF2Bneu4 335 449 IPR002735 GO:0003743|GO:0006413
Blo17g00214 768 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 324 768 IPR045196 GO:0003743|GO:0006413
Blo17g00214 768 Gene3D - 622 759 - -
Blo17g00214 768 SUPERFAMILY Phosphoglycerate mutase-like 88 304 IPR029033 -
Blo17g00214 768 SMART 542_3 677 764 IPR003307 GO:0005515
Blo17g00214 768 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 418 453 IPR016190 GO:0003743|GO:0006413
Blo17g00214 768 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 324 768 - -
Blo17g00214 768 CDD W2_eIF5 617 766 - -
Blo17g00214 768 Pfam Domain found in IF2B/IF5 331 447 IPR002735 GO:0003743|GO:0006413
Blo17g00214 768 Coils Coil 479 499 - -
Blo17g00214 768 MobiDBLite consensus disorder prediction 519 545 - -
Blo17g00214 768 MobiDBLite consensus disorder prediction 468 510 - -
Blo17g00214 768 MobiDBLite consensus disorder prediction 600 614 - -
Blo17g00214 768 Pfam eIF4-gamma/eIF5/eIF2-epsilon 690 768 IPR003307 GO:0005515
Blo17g00214 768 Pfam Histidine phosphatase superfamily (branch 1) 181 291 IPR013078 -
Blo17g00214 768 Pfam Histidine phosphatase superfamily (branch 1) 88 165 IPR013078 -
Blo17g00214 768 MobiDBLite consensus disorder prediction 589 618 - -
Blo17g00214 768 Gene3D - 425 465 - -
Blo17g00214 768 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 90 99 IPR001345 GO:0003824
Blo17g00214 768 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 85 312 IPR005952 GO:0004619|GO:0006096|GO:0016868
Blo17g00214 768 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 330 421 IPR016189 GO:0003743|GO:0006413
Blo17g00214 768 SMART PGAM_5 87 273 IPR013078 -
Blo17g00214 768 CDD HP_PGM_like 88 303 IPR013078 -
Blo17g00214 768 Gene3D - 318 424 - -
Blo17g00214 768 ProSiteProfiles W2 domain profile. 609 768 IPR003307 GO:0005515
Blo17g00214 768 MobiDBLite consensus disorder prediction 467 557 - -
Blo17g00214 768 Gene3D - 77 312 IPR029033 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01040 Blo-Chr4:14340480 Blo17g00214 Blo-Chr17:2151219 5.51E-11 transposed
Blo08g00035 Blo-Chr8:312465 Blo17g00214 Blo-Chr17:2151219 1.09E-06 transposed
Blo11g00290 Blo-Chr11:2350693 Blo17g00214 Blo-Chr17:2151219 1.28E-07 transposed
Blo14g00052 Blo-Chr14:314424 Blo17g00214 Blo-Chr17:2151219 1.16E-06 transposed
Blo17g00722 Blo-Chr17:21556590 Blo17g00214 Blo-Chr17:2151219 3.61E-07 transposed
Blo17g00214 Blo-Chr17:2151219 Blo18g00212 Blo-Chr18:2079766 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00214 K03262 - csv:101210873 611.683