Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00225 ATGGTAACTTCCGGGCCACCCACTCCGATAGGTGGTGCCCAATCTGTGCCATCTTCATTTTTGAGGTCAAATTCAGGAATGTTGGGAGCTCAAGGGGGTCCTTTGCCTTCCCAGTCGTCTTTTCCTTCACTTGTATCACCTCGCACTCAGTTTGGCAATATGAATATGCTTGGTCATATACCCAATGTCTCTTCTTTCCTGAACCAGTCTTTGGCGAATGGGGGTCCAAATTCTGGGCTTTCAGCTCCTGTAAGTGGTCTGCATGGAGGTATTGACCCTGGTGCTGAGATGGATCCGCTGTCCAGCGTAGGTAATGGAATGGATTTTAATAATTCTGCATCGTCATTTGTCGCATCGAACGTAGGAAACCCTGGTTCTTCGGGTCAAAATCAGGGTCCCCAATTTTCAAATCTTTCTAGTGGCCAGCTATTAGCAGAGCAACAATTGGAATCACAGAATTTCCATCACGCTCAGCAGTCAATGCAACAGTTTTCTGCTCCTTCCAGCACCTTGCAGCCACAACAGCACCAATTGCAAACAATTAGAGGAGGCTTAGGTGGTGCTGGACAAGTCAAATTGGAGCCCCAAGTGCTTCCCAACGAGCCACAAGGACAACAAGCTCCTCAGCTGAGGAATCTTGGTCCAGTGAAAATGGAAAACCAACGACTCCAACCCATGAGAGCTGCAAAACCGACATATGAACCTGGGATGTGTGCTCGGCGTCTGACTCACTACATGTATCAGCAACAACACAGGCCCCACGACAACAATATTGAATTCTGGAGGAAGTTTGTTGCTGATTACTTTGCACCCAATGCCAAAAAGAAGTGGTGCGTTTCCATGTATGGAAGTGGTAGGCAGACAACTGGAGTTTTTCCTCAGGATGCATGGCACTGTGAAATATGCAGCCGCAAGCCTGGCCGTGGTTTTGAAGCGGCTTTTGAAGTCCTTCCAAGGCTTTTCAAAATTAAGTATGAAAGTGGTACTTTGGAAGAACTTCTTTATGTTGATATGCCCTGTGAATATCACAATCCATCTGGTCAGATTGTCCTGGATTATGCAAAAGCAATTCAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGGGATGGCCAACTTCGAATAGTCTTCAATACAGACCTAAAGATTTGTTCGTGGGAATTTTGTGCTCGACGGCACGAAGAGCTTATTCCTCGAAGATTATTGATACCCCAGGTTGGTCAACTTGGGGCAGCGGCCCAAAAATACCACACTACCATGCAAAGTGCATCATCCAGTTTGTCTGCACCAGAGTTGCAAAGCAACTGTAATATGTATACTCTCTATCTCTTTAAATTCTGCTTCAGGTTTGTTGCGTCAGCTCGGCAACTGGCTAAAGCTTTGGAAGTCCCATTAGTAAATGATTTAGGGTATACAAAGAGATATGTGAGGTGTCTTCAGATATCAGAAGTGGTTAATAGTATGAAAGACTTGATTGATTACAGCAGAGAAACAGGAAATGGGCCAATGGAAAGTCTAACAAAATTTCCTCGAAGAAGTTCTTCAGCCGGTTTCCCAACTCAAGCTCAACGGGCAGAGGAACAACTGCAGCAGCAGCTGCAACCGCAAACATCTGTTCAGAATGCCAGCAATGACCCAAGCCCGGTACAAATCTCAACGAGCAATAGCATGGCAATGGCCGGCATAAGTAATGCTATCAACATAGCCTCAACTTCCACTAATGCAAGCACAATAGTTGGGTTACTTAACCAAAATTCGATGAGCTCAAGACTGCAGAACAGTCCCTATGGAGGTCCACAATCGCAACCAAACCCGTCTCAGTTCCAACCTCCGACATCCTCGTCATTGAATGCCCATGCACAGCCATTACAGAACGCTGTAGGATCAGCTGCAAATCACTTAAACACGTCCAATTCCTCATCAAATACTCCAATTACCCTGCACCAACCACCATTTCCCGGTGATGCTGATCAGAATGATTCTCAGAGTTCTGTCCAGAAAATTTTGCAGAAAATGATGATGTCAAACCAAATACCCGACATGGGTAGTGGCATGGTCAGCGCTGCTTCTCTGGTAAATGATGTGAAAAATGGAATTTTACCCACGAGTAATGCCGTGCTTGGAAGTGGCGGCCTGAATAGTTTGGGGAATGGAATGGCCATGGTTGGTGGGCATGGCCAGTCGGCGATGGTTGTCAACGGAGCAAGATCCTCAGGGGGAAACAATTCCGTAATGAACGGAAGAATGGGAATGGCAACACTGGCTCGAGACCAAAGCATGAATTTTCAACATCAGGATTTGGAAAATCAGCTTCTGAATGGTTTAGGAACAGCTAATGGGTTTAACAGTCTTCAATTTGATTGGAAGTCATCTCCATGA 2379 45.69 MVTSGPPTPIGGAQSVPSSFLRSNSGMLGAQGGPLPSQSSFPSLVSPRTQFGNMNMLGHIPNVSSFLNQSLANGGPNSGLSAPVSGLHGGIDPGAEMDPLSSVGNGMDFNNSASSFVASNVGNPGSSGQNQGPQFSNLSSGQLLAEQQLESQNFHHAQQSMQQFSAPSSTLQPQQHQLQTIRGGLGGAGQVKLEPQVLPNEPQGQQAPQLRNLGPVKMENQRLQPMRAAKPTYEPGMCARRLTHYMYQQQHRPHDNNIEFWRKFVADYFAPNAKKKWCVSMYGSGRQTTGVFPQDAWHCEICSRKPGRGFEAAFEVLPRLFKIKYESGTLEELLYVDMPCEYHNPSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFNTDLKICSWEFCARRHEELIPRRLLIPQVGQLGAAAQKYHTTMQSASSSLSAPELQSNCNMYTLYLFKFCFRFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGNGPMESLTKFPRRSSSAGFPTQAQRAEEQLQQQLQPQTSVQNASNDPSPVQISTSNSMAMAGISNAINIASTSTNASTIVGLLNQNSMSSRLQNSPYGGPQSQPNPSQFQPPTSSSLNAHAQPLQNAVGSAANHLNTSNSSSNTPITLHQPPFPGDADQNDSQSSVQKILQKMMMSNQIPDMGSGMVSAASLVNDVKNGILPTSNAVLGSGGLNSLGNGMAMVGGHGQSAMVVNGARSSGGNNSVMNGRMGMATLARDQSMNFQHQDLENQLLNGLGTANGFNSLQFDWKSSP 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2321508 2325752 + BLOR16046 Blo17g00225 72613

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00225 792 MobiDBLite consensus disorder prediction 104 137 - -
Blo17g00225 792 MobiDBLite consensus disorder prediction 507 553 - -
Blo17g00225 792 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 225 790 - -
Blo17g00225 792 MobiDBLite consensus disorder prediction 589 618 - -
Blo17g00225 792 MobiDBLite consensus disorder prediction 496 553 - -
Blo17g00225 792 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 227 - -
Blo17g00225 792 PANTHER LIM DOMAIN-BINDING PROTEIN 225 790 IPR029005 -
Blo17g00225 792 MobiDBLite consensus disorder prediction 1 46 - -
Blo17g00225 792 MobiDBLite consensus disorder prediction 631 648 - -
Blo17g00225 792 MobiDBLite consensus disorder prediction 631 665 - -
Blo17g00225 792 MobiDBLite consensus disorder prediction 155 177 - -
Blo17g00225 792 PANTHER LIM DOMAIN-BINDING PROTEIN 1 227 IPR029005 -
Blo17g00225 792 Pfam LIM-domain binding protein 241 506 IPR029005 -
Blo17g00225 792 MobiDBLite consensus disorder prediction 83 137 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00225 - - - jre:108986178 823.928
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo17g00225 Blo18g00225 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00084 Blo-Chr9:1464228 Blo17g00225 Blo-Chr17:2321508 1.05E-87 dispersed
Blo17g00225 Blo-Chr17:2321508 Blo09g00083 Blo-Chr9:1456369 3.40E-18 dispersed
Blo17g00225 Blo-Chr17:2321508 Blo18g00225 Blo-Chr18:2207489 1.63E-88 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1200 . . . . . . . . Cmo04g02535 Cmo15g00639 . . . . . . . Bhi04g02144 . . . . . . Cla08g00655 Cam08g1085 Cec08g0671 Cco08g0780 Clacu08g0789 . Cre08g0594 Cone4ag1452 Cone7ag1480 Cone17ag0802 Cone20ag0406 . . . Cme03g00421 Blo17g00225 Blo18g00225 . Bda13g01540 Bpe02g01598 Bpe14g00324 Bma01g00876 . . . . . . Car04g02333 Car15g00580 Cpe01g02095 . . . . . . . . . . . . . . . Lsi08g00515 . Chy03g00579 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001301 2 5 2 1 2 2 4 2 2 2 2 2 4 2 2 4 2 2 4 2 2 2 1 2 2 2 2 7 3 2 75
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo17g00225 Blo_Chr17 FPKM 18.675268 20.696289 10.895828 12.733715 51.593616 34.472713 50.805473 51.348206 54.263554 68.266251