Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00226 ATGGTCTCGACCCAAGGAGATCCTCCTCAGAGAATTGCTGCTTATATGGTGGAAAGCCTAGCAGCTCGTGTTGCTGCCCCGGGAAAATGTCTTTATAAAGCATTAAAATGTAAAGAGCCTCCCTCTTCCGACCGCCTTGCAGCCATGCAGATACTTTTAGAGGTTTGCCCGTGTTTCAAATTTGGATTTATGGCAGCTAATGGTTCAATAATAGAGGCGTCTAAAAATGAAAGAAGAGTTCATATTGTAGACTTTGACATAAACCAGGGTAGTCAATATATAACCTTGATTGAAATGCTTGCAAATCAACCAGGTGGCATGTCCCAACACTTCAGATTAACTGGAGTTGATGACCCTGAGTCCGTTCAACGTCCTGTTGGGGGCCTGAAAATCATTGGACAGAGACTTGAAAAGCTTGCCGAAGTATTAGGGGTTTCATTCGAGTTTAGAGCCGTGGCCTCAAAGACATCGATAGTCACTCCCTCGACATTGGACTGTCGTCCCGATGAAGCACTCATCATAAATTTCGCTTTACAACTTCATCACATGCCTGACGAAAGTGTTTCGACATCAAACCTTCGAGACCAGCTTCTTCGCATGGTGAAGAGTTTGAATCCAAAAATGGTGACAGTCGTCGAACAAGACGTGAACACCAACACTGCCCCGTTTTTTCCAAGATTTATGGAAGCCTACAATTACTACTCTGCTGTATTTGAATCTCTCGATGTGACTCTTCCAAGAGAAAGTCCAGATAGAATGAATGTAGAAAGGCATTGCCTTGCAAGAGACATAGTGAACATAGTTGCATGCGAGGGGGAAGAACGAATAGAGCGATATGAAGTTGCTGGCAAATGGAGGGCGAGGCTGACAATGGCCGGATTCGTCTCATGTCCAATGAGCTCAAACGTTGTAAAATCAATCAGGGATCTGATTGAAGAGTACTGTGATAGGTACAAAGTGAAGGAGGAAAAGGGTGCACTTCATTTTGGTTGGGAAGACGAGCTTGATAGTTGCTTCTGCTTGGAGGTAACTTCTTACATATTATTGTTTCCTAATAGACATCACTTGTAA 1071 43.6 MVSTQGDPPQRIAAYMVESLAARVAAPGKCLYKALKCKEPPSSDRLAAMQILLEVCPCFKFGFMAANGSIIEASKNERRVHIVDFDINQGSQYITLIEMLANQPGGMSQHFRLTGVDDPESVQRPVGGLKIIGQRLEKLAEVLGVSFEFRAVASKTSIVTPSTLDCRPDEALIINFALQLHHMPDESVSTSNLRDQLLRMVKSLNPKMVTVVEQDVNTNTAPFFPRFMEAYNYYSAVFESLDVTLPRESPDRMNVERHCLARDIVNIVACEGEERIERYEVAGKWRARLTMAGFVSCPMSSNVVKSIRDLIEEYCDRYKVKEEKGALHFGWEDELDSCFCLEVTSYILLFPNRHHL 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2326381 2327451 - BLOR16047 Blo17g00226 72614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00226 356 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 1 334 IPR030011 GO:0003700|GO:0005634
Blo17g00226 356 ProSiteProfiles GRAS family profile. 1 343 IPR005202 -
Blo17g00226 356 Pfam GRAS domain family 2 334 IPR005202 -
Blo17g00226 356 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 334 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01323 Blo17g00226 CCT
Blo01g01323 Blo17g00226 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01323 Blo-Chr1:50578727 Blo17g00226 Blo-Chr17:2326381 0 dispersed
Blo15g00176 Blo-Chr15:1798277 Blo17g00226 Blo-Chr17:2326381 2.07E-84 dispersed
Blo17g00226 Blo-Chr17:2326381 Blo09g00319 Blo-Chr9:13372989 3.09E-60 dispersed
Blo17g00226 Blo-Chr17:2326381 Blo15g00454 Blo-Chr15:6842938 8.55E-135 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13499 PF03514 GRAS 6.80E-116 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00226 - - qsu:111984328 558.91