Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00264 ATGAACCCAGTTCTTTTCTGCTCACTGTTGGTCTTTTTTCTTTCTGGGTTTTTCTCGACGACGGCGAAGAACACAACGACGCAGGTGAATGTGGGTTTGGTGCTTGATTTAGATACAGAACTTGGGAAGATGGCGCTGAGCTGCGTGGACATTGCTCTCTCTGACTTCTACTCCTCCCACGGTGGTTTTAAGACCAGGCTCCAAGTCCATCCTAGAGACTCCATGGGAGACGTCGTCGGAGCTGCAGCTGCAGCGCTGGACCTTCTCCACAATGTGAACGTGGAAGCCATCATCGGACCTAAGAATTCAATGCAGGCTCCCTTCTTGATTGATCTTGGAGAAAAGGCTCAGGTCCCCATTATTTCCTTTTCTGCCACAAGCCCTTGCCTTACATCTCCTCGAAGTTCATATTTTTTCCAGATTGCCCAAAACGACTCATATCAAGTTCAACCCATTAGTGCAATCCTCAAAGCTTTCGGGTGGCGAGAACTCGTCCCCATCTACGTTGATAATGAGTTTGGGCGGGGAATTATATCCTATTTGGCCGATGCGTTATACGACATGGACGCTCGTATGCCTTATAGAAGTCCTATTCCTAAGTCAGCTTCTGATGATCAAATTGTAACCGAGCTGTACAAGTTGATGAATATGCCAACTAGGGTTTTTGTTCTCCACCTCCTACCTAGCCTTGCTTCAAGGATTTTGACAAAAGCAAAAGAGATTGGAATGATGAGTGAAGGCTATGTCTGGATCATGACTGGTTCGACCAGTAATCTCTTGAATCAAATAGACAAGTCAGTTTTCAATTCTATGCAAGGTGTACTGGGTGTGAAGACTTATGTTCCGCCATCGAAAGAGCTACAGAATTTCACAGAGAGGTGGAAATGGAAGTTTCACCAAGATAATCCTACTATTCTCGATGTTCATTTGAATGTTTTTGGACTTTGGAGTTATGACGCTGTTTGGGCATTAGCAATGGCTGTCGAGAGAGCCTTCCCGCTTTCGAACCTGGGCTATCGAAAGACCAATAGCTCGACCAATCTAACGGAACTCGACACTTTTGGCTTTTCTCTTAATGGCCCAAAAATTCAGGAAGCTCTATCCAACACAACATTTTTAGGACTTAGCGGAGCGTTTAGCCTCATTGACGGCCAACTGCAGTCAACAACTTCAGAAATAGTGAACATAAATGATCAGGGATGGAGAACCATTGGATTTTGGACACCTGAAACTGGAGTCACAAAAAGCTTGAGTTCATCCTCTTCAGTCGAGCCAACTCTAGGGAGAATTACATGGCCAGGAGATTCTTATTCAGCTCCAAAGGGATGGGAGATTCCAACAAATGGGAAGAAACTGCGGGTAGGAGTACCTATCAAGGAGGGTTTTACTGAATTTGTGAAAGTATCAAATGATTCCAACTCAAATACAACTATCGTCACTGGCTTTTGCATAGACATCTTTAATGCTGTTCTTGAGGATTTGCCTTACGCCATTGTTCCGGAGTACATCCCCTTTAACAAAAACTTTATGTACGATGAAATGGTCTACGAAGTCTTTCTTGGGAACTTCGACGCATTTGTGGGAGATATAACCATCAGAGCGAACAGATCTTTGTTCATAGATTTTACGTTGCCATACACAGAATCAGGTATTCTAATGGTGGTACCTATCATGGAGAACTCGAGGAAGAATGCATGGGTGTTCTTGAAGCCTCTGTCTTGGGATGTTTGGGCCACAAGTGGTTGCTTCTTCGTCTTCATCGGCTTCGTTGTATGGGTTCTTGAACACAGAATAAATGAAGATTTCAGGGGACCTCCCGCTCATCAGATTGGCACTAGTCTCTGGTTCTCCTTCTCCACCATGGTTTTTGCACAGAGGGAAACAGTATTTAGCAATTTGGCTAGATTTGTGGTGGTTATATGGTTCTTCGTCGTCCTTATTCTGACGCAGAGCTACACTGCCAGTTTAACCTCGCTTCTCACAGTTCAACAGCTACAACCTACTGTAACAGATGTGAATCAGCTTTTGAAGAGCAAGAAACGTGTTGGATATCAAGGTGGTTCTTTTGTTCTCGGACTTTTGAAATCCTTAAAATTTGACCCTGACAAACTAGTGGGCTATGGCTCTCCAGAAGAATTAGATGAACTACTCTCCAAAGGAAGCGCCAATGGAGGCATCTCAGCCGCATTAGAAGAAATTCCCTACGTGAAGCTTTTTCTTTCCAAATACCGCTCAAAATATACCACCATTGATCCTTCTTACAAAACTGGTGGATTTGGATTTGCATTTCCTTTGGGTTCTCCACTTGTGGCTGACATATCGAGGAAAATATTGGAAGTAACAGAGGGACCCAAGATGAACCGGATCGAAAAGAACTGGTTTCACCAGACCTCCTGCCTATCTTCCAGAACCGATAGTACTTCAGCGAGTCTCGGTCTTGAGAGCTTTTGGGGACTTTTTCTCATTGTTGGAACCGCTGCAATGCTAGCCATAATTTCATTCGCCATAAGTTTTCTTTACAAGCATAGGCATGTTCTCCGACACGATTCGAATTCGTCTCTCTGGGAAAGAATCAGAACAATTTCAAGAATCTACAACCAGCGGGATCTCACTTCTCATACTTTCAGAAAGAGGGAAATGACCCACAGAAGTGGAATTAGCGCCGTTAATGGAGGACAAGGGTTTGAGTCGGCCTCCCCATGCTCCAATTTCCCCCAAAGCCCACCGGGAAATTCAACCGATATTGGCGACGCGAGCCCTAGCGATGGAGCTTCTCCGAAGAGGACACCGGAGTTTGAGCTGTCAGTTGTCACTACAAATTCCAAAGACGATTTAGATGAGAGTACGGACATGACATAA 2859 44.56 MNPVLFCSLLVFFLSGFFSTTAKNTTTQVNVGLVLDLDTELGKMALSCVDIALSDFYSSHGGFKTRLQVHPRDSMGDVVGAAAAALDLLHNVNVEAIIGPKNSMQAPFLIDLGEKAQVPIISFSATSPCLTSPRSSYFFQIAQNDSYQVQPISAILKAFGWRELVPIYVDNEFGRGIISYLADALYDMDARMPYRSPIPKSASDDQIVTELYKLMNMPTRVFVLHLLPSLASRILTKAKEIGMMSEGYVWIMTGSTSNLLNQIDKSVFNSMQGVLGVKTYVPPSKELQNFTERWKWKFHQDNPTILDVHLNVFGLWSYDAVWALAMAVERAFPLSNLGYRKTNSSTNLTELDTFGFSLNGPKIQEALSNTTFLGLSGAFSLIDGQLQSTTSEIVNINDQGWRTIGFWTPETGVTKSLSSSSSVEPTLGRITWPGDSYSAPKGWEIPTNGKKLRVGVPIKEGFTEFVKVSNDSNSNTTIVTGFCIDIFNAVLEDLPYAIVPEYIPFNKNFMYDEMVYEVFLGNFDAFVGDITIRANRSLFIDFTLPYTESGILMVVPIMENSRKNAWVFLKPLSWDVWATSGCFFVFIGFVVWVLEHRINEDFRGPPAHQIGTSLWFSFSTMVFAQRETVFSNLARFVVVIWFFVVLILTQSYTASLTSLLTVQQLQPTVTDVNQLLKSKKRVGYQGGSFVLGLLKSLKFDPDKLVGYGSPEELDELLSKGSANGGISAALEEIPYVKLFLSKYRSKYTTIDPSYKTGGFGFAFPLGSPLVADISRKILEVTEGPKMNRIEKNWFHQTSCLSSRTDSTSASLGLESFWGLFLIVGTAAMLAIISFAISFLYKHRHVLRHDSNSSLWERIRTISRIYNQRDLTSHTFRKREMTHRSGISAVNGGQGFESASPCSNFPQSPPGNSTDIGDASPSDGASPKRTPEFELSVVTTNSKDDLDESTDMT 952
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2724289 2728424 + BLOR16085 Blo17g00264 72652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00264 952 SUPERFAMILY Periplasmic binding protein-like II 429 796 - -
Blo17g00264 952 Gene3D - 566 690 - -
Blo17g00264 952 Pfam Bacterial extracellular solute-binding proteins, family 3 479 795 IPR001638 -
Blo17g00264 952 PIRSF IGluLR_plant 1 915 IPR017103 -
Blo17g00264 952 MobiDBLite consensus disorder prediction 881 952 - -
Blo17g00264 952 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 28 888 - -
Blo17g00264 952 PANTHER GLUTAMATE RECEPTOR 2.9 28 888 - -
Blo17g00264 952 CDD GluR_Plant 450 794 - -
Blo17g00264 952 Gene3D - 451 565 - -
Blo17g00264 952 Pfam Ligand-gated ion channel 796 826 IPR001320 GO:0015276|GO:0016020
Blo17g00264 952 SMART GluR_14 451 796 IPR001320 GO:0015276|GO:0016020
Blo17g00264 952 Gene3D - 354 450 - -
Blo17g00264 952 MobiDBLite consensus disorder prediction 886 919 - -
Blo17g00264 952 CDD PBP1_GABAb_receptor_plant 30 415 IPR044440 -
Blo17g00264 952 SUPERFAMILY Periplasmic binding protein-like I 27 444 IPR028082 -
Blo17g00264 952 Gene3D - 707 801 - -
Blo17g00264 952 Gene3D - 146 307 - -
Blo17g00264 952 Pfam Receptor family ligand binding region 47 398 IPR001828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00264 Blo-Chr17:2724289 Blo18g00248 Blo-Chr18:2559804 0 dispersed
Blo17g00263 Blo-Chr17:2708962 Blo17g00264 Blo-Chr17:2724289 8.45E-168 tandem
Blo05g00858 Blo-Chr5:31030888 Blo17g00264 Blo-Chr17:2724289 3.89E-107 transposed
Blo17g00171 Blo-Chr17:1730743 Blo17g00264 Blo-Chr17:2724289 0 transposed
Blo17g00264 Blo-Chr17:2724289 Blo18g00245 Blo-Chr18:2464399 2.84E-07 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00264 K05387 - qsu:112030675 1070.46