Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00265 ATGGCAGCAGCTAGATCAGAGCAAAACCCTATTCGAAAAGCTTCAAAAGTGGGAATAATAGGGGCTGGTATAAGCGGCATTGCTGCAGCCAAACAGCTTTCGTCGCATAACCCGATTGTTTTTGAGGCCACGGACTCCATTGGAGGTGTTTGGAAGAGCTGTTCTTACAGCTCCACGAAGCTGCAAACTCCTAGAACGGACTACGAATTCTCTGACTACCCTTGGCCTTCAAGAGATGATTCTGCTTTTCCGTCTCACCTCGAGGTTCTAGAATATCTGCGTGGTTATGCTGACCATTTTGACGTGCTTAAGTGTGTCCAGTTCAATTCAAAGGTGGTGCAAATTCGGTACGTAGGGGAAGGCTGCTCCCAAGTTTATGATATCAACTCGGCGGATGCTAGGGAGTATGGAAGTCTGTTGAATGGTCATTGTGTTTGGGAAGTAGCTGTTCAGAATATTGATCAATCTGAAGCTCCTCAGTGGTATGCTTTTGAGTTTCTGGTGGTATGCACTGGTAAATATGGGGATTTACCAAGATACCCAACCTTTCCAAGAAATAGAGGTCCGCAAGTATTCTCAGGTAAAGTGTTACACTCCATGGATTACTCTAAACTCGACAAAGAAGCTGCTCATCGACTTCTGAAAGGAAAGAAGGTCGCCATTGTTGGCTACAAGAAATCAGCCATTGATCTTGCTCTTGAATGCGCACAGGCCAATCAAGGTGAAGATGGAGAAGCGTGCACAATGGTGATAAGGAGTCTACATTGGACCGTTCCAACGTACTGGATATGGGGATTGCCTTTCTACTTATTTTATTCAACGAGGTTTTCTCAGCTTCTTCACAGAAGCCCCAACCAGAGCTTCTTCAAGGCTCTCTTCTGCTTTCTTTTCTCTCCCATGAGAAGAGCAATTTCAAAGTTCATAGAGTCCTACTTGGTTTGGAAGCTGCCATTGGTGAAATATGGGCTTAAACCAGACCACCCATTTGAGGAGGACTATGCTTCTTGTCAAATGGCAATTCTTCCAGAAAATTTCTTTCCTGAAGCAGAAAAGGGTAAGATCACATTCAAAAGGGCATCAAAATGGTGGTTTTGGAGCGGAGGACTCGAATTCGAGGACGGATCGAAGCTCGAAGCAGATGTCGTGATTTTCGCCACCGGCTACGACGGAAAAGAGAAGCTTCAGTCGATATTACATGACCCTTTTAGAGGACTTTTGGTTGACTCTTCTGGGTTAATGCCCTTATACAGGGGTACTATCCATCCACTCATTCCAAACATGGGCTTTGTGGGGTATATTGAGAGTGTCTCTAATCTTCACACTGCAGAGCTTCGCTGCATATGGCTGGCTAAACTGGCTGAGAATGCTCATTTCAAGCTTCCCACCATAGACAAAATGCTGCAACAGATCTACAGAGAAGTTGGTGTCATGAAGAAGACGACTCGGTTCTACAAGAGACACTGCATTTCCACTTTTAGCATCAATCACAGCGATGAGATTTGCGAGGAAATGGGGTGGACAGCCAAGAGAAAAAGCAACTTGCTTTTGGAAGTTTTCAGTCCTTACAGCAGCCAGGACTACGCCAAAAATGACTAA 1596 45.05 MAAARSEQNPIRKASKVGIIGAGISGIAAAKQLSSHNPIVFEATDSIGGVWKSCSYSSTKLQTPRTDYEFSDYPWPSRDDSAFPSHLEVLEYLRGYADHFDVLKCVQFNSKVVQIRYVGEGCSQVYDINSADAREYGSLLNGHCVWEVAVQNIDQSEAPQWYAFEFLVVCTGKYGDLPRYPTFPRNRGPQVFSGKVLHSMDYSKLDKEAAHRLLKGKKVAIVGYKKSAIDLALECAQANQGEDGEACTMVIRSLHWTVPTYWIWGLPFYLFYSTRFSQLLHRSPNQSFFKALFCFLFSPMRRAISKFIESYLVWKLPLVKYGLKPDHPFEEDYASCQMAILPENFFPEAEKGKITFKRASKWWFWSGGLEFEDGSKLEADVVIFATGYDGKEKLQSILHDPFRGLLVDSSGLMPLYRGTIHPLIPNMGFVGYIESVSNLHTAELRCIWLAKLAENAHFKLPTIDKMLQQIYREVGVMKKTTRFYKRHCISTFSINHSDEICEEMGWTAKRKSNLLLEVFSPYSSQDYAKND 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2743950 2746115 - BLOR16086 Blo17g00265 72653

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00265 531 PIRSF FMO 13 520 IPR000960 GO:0050660|GO:0050661
Blo17g00265 531 SUPERFAMILY FAD/NAD(P)-binding domain 346 527 IPR036188 -
Blo17g00265 531 SUPERFAMILY FAD/NAD(P)-binding domain 16 241 IPR036188 -
Blo17g00265 531 Gene3D - 11 278 IPR036188 -
Blo17g00265 531 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 6 529 - -
Blo17g00265 531 Gene3D - 349 528 IPR036188 -
Blo17g00265 531 Pfam Flavin-binding monooxygenase-like 15 506 IPR020946 GO:0004499|GO:0050660|GO:0050661
Blo17g00265 531 PANTHER DIMETHYLANILINE MONOOXYGENASE 6 529 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00265 K00485 FMO; dimethylaniline monooxygenase (N-oxide forming) / hypotaurine monooxygenase [EC:1.14.13.8 1.8.1.-] - qsu:111999521 816.224
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00857 Blo-Chr16:36034609 Blo17g00265 Blo-Chr17:2743950 0 dispersed
Blo17g00265 Blo-Chr17:2743950 Blo06g00349 Blo-Chr6:21056009 5.39E-18 dispersed
Blo17g00265 Blo-Chr17:2743950 Blo01g00581 Blo-Chr1:6362140 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g187 . . . . . Bpe02g00314 . . . . . . . . . . . Bhi04g01538 Tan02g1562 Cmetu03g0531 . Hepe08g1457 . Lcy13g2236 . . . . . . . Cone4ag1711 Cone7ag1629 . . . . . . Blo17g00265 . . . Bpe14g00290 . . Bma02g00330 . . . . . . . . . . . . . . . . Cla08g00973 Cam08g1422 Cec08g1001 Cco08g1124 Clacu08g1126 . Cre08g0910 Lsi08g00821 . Chy03g00644 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002096 2 2 3 2 3 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 3 2 2 2 2 3 2 2 2 2 63
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo17g00265 Blo_Chr17 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0