Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00272 ATGGTTCTGCGTAACGGTTCCAAGGTGTGGGTTGAAGACAGAGAGTTTGTTTGGGTTGCTGCTGAAGTCATTGACCAAAGTGGTAAACAGTTACGAGTCGTGACTGCTTCGGGGAAGAAGGTTTTGGCTTCTCCAGAGAAGGTGTTTCCGAGGGATGCAGACGAAGAGGATCATGGCGGAGTGGACGACATGACGAAGTTGACTTATTTGAATGAGCCTGGCGTGGTATATAATCTGCAGAGGAGATATTCTCTCAACGACATATATACATACACAGGTAGCATTTTGATTGCCGTTAATCCATTCACAAAGCTTCCACATCTATACAATATCCATATGATGGAGCAGTATAAGGGTGCTCCTTTTGGGGAACTCAGCCCTCATGTTTTTGCAGTTTCTGATGCTTCTTATAGGTCAATGATCAGTGATGGTCGAAGTCAATCCATATTAGTTAGTGGAGAAAGTGGGGCAGGTAAAACTGAAACAACGAAATTAATAATGCAGTATCTCACATTTGTTGGTGGTCGGGCTTCTGGTGATGATAGGACAGTTGAGCAACAAGTTCTTGAGTCAAATCCACTCCTAGAGGCCTTTGGGAATGCAAGGACAGTTAGAAACGATAATTCAAGTCGTTTTGGCAAATTTGTAGAGATTCAGTTTGATGCTGATGGTAGAATATCTGGTGCTGCAATTAGAACTTACCTTTTGGAGAGATCTCGTGTTGTCCAGATAACAGATCCTGAGAGGAATTATCATTGCTTTTATCAGCTGTGTGCATCTGGGAGGGATGCAGAGAAGTATAGTTTAGATCAACCAAGTAAATTCCACTATTTAAATCAAAGCAAGACCTATGAACTTGATGGGGTGAACAGTGCTGAGGAATACATGAAGACCAGGAGGGCGATGGATATAGTTGGCATAACACGTGAAGACCAGGAAGCTATCTTTCGAACATTGGCTGCAATATTGCATCTGGGCAACATTGAGTTTTCTCCTGGAAAGGAGCATGATTCTTCAACTATAAAGGATAAAAAATCTAATTTTCATCTACAAATGGCTGCTAATCTTTTCATGTGTGATGTGAATCTCTTAATTTCAACTCTCTGTACGCGCTCAATTCAAACCCTTGAAGGAACTATTGTCAAGGCTCTTGATTGTAATGCTGCAGTTACTGGCCGGGATGCATTGGCCAAGACGGTTTATGCAAGATTGTTTGACTGGCTTGTTGACAAGATTAATCAGTCTGTTGGACAAGACCCAAATTCGTCTATGCAAATTGGGGTGTTAGACATTTATGGATTTGAGTGCTTTAAGGATAACAGTTTCGAGCAGTTTTGCATCAATTTTGCAAATGAAAAGCTTCAGCAGCATTTTAATGAGCATGTATTCAAGACGGAGCAGGAGGAATATAGTAAAGAAGAAATTGACTGGAGCTACATTGAATTTATTGACAACCAAGATGTCCTTGATTTAATTGAGAAGGGTAGTTCTAGCCTTGATACTCCCCACGAAATTGATGCAAGAAACAATAAGTTCGATCAGAACTCTCTAGGCAAACTTGTTCGGTCGAAGAACCATGAAGAACATCAGAAAGAACCTTCCAAGAAGGAAAAAGTTGAAATCGAAAAGCTTAAGGGAGCACTTGCAGTTTTGAAACCTGTTGGGATAATTTCTCTTCTTGATGAAGCTTGCATGTTCCCAAGATCAACCCATGAAACATTTTCAACCAAATTATTTCAAAACTTTCGGGGCCATCCAAGATTAGAAAAGGCAAAATTTTCAGAAACAGATTTTTTGGTTTCCCATTATGCTGGAAAGGTCACTTATCATTCAGATACATTTTTGGATAAAAATCGTGATTACGTAGTGGTAGAGCATTGCAATTTATTGTCTTCTTCCAAATGCACTTTTGTTGCTGGTCTATTTCCTTTACTCCCAGAAGAATCTTCTCGGTCTTCTTATAAGTTTTCTTCTGTGGCCTCTAGATTCAGGCAACAACTTCAAGCACTCATGGAAACCCTCAATTCAACAGAACCTCATTATATTCGGTGTGTGAAGCCCAATTCTCTTAATCGGCCTCAGAAATTTGAGAATCAAAGTATTCTACACCAACTACGATGTGGGGGTGTTTTAGAAGCTGTACGGATAAGTTTGGCTGGTTATCCCACTAGAAGAACGTATTCAGAGTTTTTAGATCGCTTTGGAGTGTTGGCTTATGAACTCATGGATGGAAGTTATGATGAAAAAGCTACAGTGGAGAAGATTTTACAGAAGTTAAAGTTTAGCAACTTTCAGTTGGGGAGGACAAAAGTGTTTTTTAGAGCTGGTCAAATTGGTATTTTAGAAGCTCGACGGTCAGAAATATTGGATAATGCTGCAAAGTGCATTCAACGTAGGCTGCGGACATATTATGCACACAAGGAATTCATCTTGATCCGCTGTACTGCAGTTGAACTCCAAGCATACTGCAGAGGATATCTTACTCGAAAGATGTATACTGCAAAACGGGAAACCGCTGCTGCTGTATTAATACAAAGAAATGTTCGCAAGTGGCTTTTACGGCGTGCTTATATAAAAATTCATTTTGCTGCTTTAGTTATACAATCTAACATTCGTGGGTTCTTAACTCGTCAAAAATTTTTGCATGGAAAGAAAAATAAAGCAGCAACTTTAATTCAGGCTCGATGGAGAACATGCAAAGTTCGTACTGCTTTCCGCCATGACCAAGCTTCTGTGGTTGCTATCCAGTGTCGTTGGCGACAAAAGGTGGCCAAAAGAGAACTTCAAAGGCTTAAGCAAGAGGCCAATGAGGCTGGAGCATTGCGATTAGCTAAAAGTAAACTTGAGAAGCAAATAGAAGAGCTCACGTGGCGTTTACATTTAGAAAAGCGACTGCGGGTTTCCAATGAAGAGGCCAAGTCCATTGAAATTTCAAAACTTCAAAAGATGTTGGCATCTCGTAACCTGGAGTTAGATGCCGCAAAATTAGCAACAATTAATGAGTGCAACAAAAATGAAGTGTTGCAGAATCAACTGGAATTGTCAGTTAAAGAGAAGTCTGCTTTGGAAAGAGAAATTATAACAATGGCAGAGCTGAGAAGGGAAAATGAATTGCTTAAAAATTCATTGAAAGCCCTGGAGAAAAAAGATTCGGCTCTGGAGCTTGAGCTAATCAAGTATCAGAGAGAGAGTGATGAAACCATTGAGAAGCTGAAGGAAGTTGAAGAAAAATGTTCTCAGCTTCAGAAGAATGTGAAAAGTTTGGAGGGAAAACTCTTAATTCTAGAGAATGATAATCATGTCCTACGACAAAAAGCATTGAGTGCAACTCCAAAGAGCATCCGGCCTGGCATTGTGAAGTCATTAGCAGAGGTGCTGGTTATCTTTGATTGTGCAATTGTTGTCTGGAAATCCTCCGGTGCTATGGGTATTACTCCCCAAGTTGATCAGAAGTCTTTTTTTGAGTCGCCGACTCCAACAAAACTTACTGCACCCTTTTTGCATGGCTTGACAGAATCACGACGATCAAAGCTGATAATTGAAAGGCATCAGGAGAACTACGAATTCCTCTCTAAGTGTATTAAAGAGGATTTGGGCTTTAAAGGTGGTAAACCACTTGCTGCTTGCATCATATACAGATGTCTTCTTCATTGGCGTGCCTTTGAATCTGAAAGGACAGTTATTTTTGACTTCGTAATTGAAGGGATCAACGAAGCTTTGAAGGCTGGGGATGAAAGTATTACGTTGCCATATTGGTTGTCCAATTCATCTGCACTGCTATGCCTTCTGCAGAGAAATTTACGATCAAATGGATTTCTAACTACAACCACTCAGCGTACAACTGGGTCAGCTAGCAGAATTGGGCAAGGAGGACTGAAATCACCTTTCAAATTCATGGGCTTTCAAGATGGTATATCTCATCTTGAAGCGAGATTTCCGGCTATACTTTTTAAACAACAACTCACTGCTTGTGTGGAAAAGATATTTGGCTTCATACGCGACAACTTGAAAAAAGAGCTATCTCCATTCTTGGGCTTGTGCATTCAGGCACCAAAAATTAATAGAATGCATTCTGGAAAATTATCAAGACCACCTGGTGGACTTCCTCAGCAACCTCCAACTACCCAGAGTAAACTAAATGTTGGTCTCCTCAGTGCTATTGTCTCATTTACCCAAATGATAATTCTGTCTAATCTTATTATCTCATCATTGGCTGGGATTCTTTATGTGGTACCCTCCTTCTTCATTCGAAAATTAATTACTCAAGTGTTTTCTTTCATCAATATATCACTTTTCAATAGTCTTCTTCTGCGCCGGGAATGTTGTACATTTTCGAATGGAGAATATGTGAAATGTGGGTTAGCAGAACTAGAGAAGTGGATTATCAATTCCAAAGAAGAGTATGCGGGGACGTCATGGCATGAGCTAAATTATATAAGGCAAGCTGTTGGGTTTCTGGTACTAAATCAGAAAAAGAAAAAATCACTTGAAGAGATAAGACAGGATCTTTGTCCGGCACTGACTGTTAGACAAATTTATCGGATAAGTACAATGTACTGGGATGACAAATATAGTACCCAAAGTGTATCTAACGAGGTGGTTGCTGAAATGAGAGAGATTTTGAACAAGGATAATCAAAACTTGACGTCCAATTCCTTCTTGTTGGATGATGACCTGAGCATTCCATTCTCTACTGAAGACATAGATATGGCTATTCCTGCTATAGACCCATCCGACGTTGAACTACCCACTTCCTTATCAGAAAATCCCTGTGCACAGTTTTTGATTCGGCATTAA 4797 40.05 MVLRNGSKVWVEDREFVWVAAEVIDQSGKQLRVVTASGKKVLASPEKVFPRDADEEDHGGVDDMTKLTYLNEPGVVYNLQRRYSLNDIYTYTGSILIAVNPFTKLPHLYNIHMMEQYKGAPFGELSPHVFAVSDASYRSMISDGRSQSILVSGESGAGKTETTKLIMQYLTFVGGRASGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDADGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASGRDAEKYSLDQPSKFHYLNQSKTYELDGVNSAEEYMKTRRAMDIVGITREDQEAIFRTLAAILHLGNIEFSPGKEHDSSTIKDKKSNFHLQMAANLFMCDVNLLISTLCTRSIQTLEGTIVKALDCNAAVTGRDALAKTVYARLFDWLVDKINQSVGQDPNSSMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKTEQEEYSKEEIDWSYIEFIDNQDVLDLIEKGSSSLDTPHEIDARNNKFDQNSLGKLVRSKNHEEHQKEPSKKEKVEIEKLKGALAVLKPVGIISLLDEACMFPRSTHETFSTKLFQNFRGHPRLEKAKFSETDFLVSHYAGKVTYHSDTFLDKNRDYVVVEHCNLLSSSKCTFVAGLFPLLPEESSRSSYKFSSVASRFRQQLQALMETLNSTEPHYIRCVKPNSLNRPQKFENQSILHQLRCGGVLEAVRISLAGYPTRRTYSEFLDRFGVLAYELMDGSYDEKATVEKILQKLKFSNFQLGRTKVFFRAGQIGILEARRSEILDNAAKCIQRRLRTYYAHKEFILIRCTAVELQAYCRGYLTRKMYTAKRETAAAVLIQRNVRKWLLRRAYIKIHFAALVIQSNIRGFLTRQKFLHGKKNKAATLIQARWRTCKVRTAFRHDQASVVAIQCRWRQKVAKRELQRLKQEANEAGALRLAKSKLEKQIEELTWRLHLEKRLRVSNEEAKSIEISKLQKMLASRNLELDAAKLATINECNKNEVLQNQLELSVKEKSALEREIITMAELRRENELLKNSLKALEKKDSALELELIKYQRESDETIEKLKEVEEKCSQLQKNVKSLEGKLLILENDNHVLRQKALSATPKSIRPGIVKSLAEVLVIFDCAIVVWKSSGAMGITPQVDQKSFFESPTPTKLTAPFLHGLTESRRSKLIIERHQENYEFLSKCIKEDLGFKGGKPLAACIIYRCLLHWRAFESERTVIFDFVIEGINEALKAGDESITLPYWLSNSSALLCLLQRNLRSNGFLTTTTQRTTGSASRIGQGGLKSPFKFMGFQDGISHLEARFPAILFKQQLTACVEKIFGFIRDNLKKELSPFLGLCIQAPKINRMHSGKLSRPPGGLPQQPPTTQSKLNVGLLSAIVSFTQMIILSNLIISSLAGILYVVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKCGLAELEKWIINSKEEYAGTSWHELNYIRQAVGFLVLNQKKKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYSTQSVSNEVVAEMREILNKDNQNLTSNSFLLDDDLSIPFSTEDIDMAIPAIDPSDVELPTSLSENPCAQFLIRH 1598
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2832739 2851902 - BLOR16093 Blo17g00272 72660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00272 1598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 835 883 IPR027417 -
Blo17g00272 1598 Gene3D - 437 494 - -
Blo17g00272 1598 PANTHER PROTEIN OPAQUE1-LIKE 506 1596 - -
Blo17g00272 1598 PANTHER PROTEIN OPAQUE1-LIKE 4 494 - -
Blo17g00272 1598 CDD MyosinXI_CBD 1181 1566 IPR037975 GO:0007015
Blo17g00272 1598 Coils Coil 921 965 - -
Blo17g00272 1598 Gene3D Kinesin motor domain 678 716 IPR036961 -
Blo17g00272 1598 Gene3D Myosin VI head, motor domain, U50 subdomain 307 418 - -
Blo17g00272 1598 Coils Coil 1005 1105 - -
Blo17g00272 1598 PANTHER MYOSIN 506 1596 - -
Blo17g00272 1598 PANTHER MYOSIN 4 494 - -
Blo17g00272 1598 Pfam Myosin N-terminal SH3-like domain 6 45 IPR004009 GO:0003774|GO:0005524|GO:0016459
Blo17g00272 1598 SMART iq_5 836 858 IPR000048 GO:0005515
Blo17g00272 1598 SMART iq_5 884 906 IPR000048 GO:0005515
Blo17g00272 1598 SMART iq_5 859 881 IPR000048 GO:0005515
Blo17g00272 1598 SMART iq_5 811 833 IPR000048 GO:0005515
Blo17g00272 1598 SMART iq_5 788 810 IPR000048 GO:0005515
Blo17g00272 1598 ProSiteProfiles Dilute domain profile. 1230 1543 IPR002710 -
Blo17g00272 1598 Gene3D - 533 677 - -
Blo17g00272 1598 Gene3D - 886 936 - -
Blo17g00272 1598 Gene3D - 838 885 - -
Blo17g00272 1598 Gene3D - 788 837 - -
Blo17g00272 1598 ProSiteProfiles IQ motif profile. 812 841 IPR000048 GO:0005515
Blo17g00272 1598 ProSiteProfiles Myosin motor domain profile. 59 786 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo17g00272 1598 Gene3D - 721 787 - -
Blo17g00272 1598 Pfam IQ calmodulin-binding motif 887 906 IPR000048 GO:0005515
Blo17g00272 1598 Pfam IQ calmodulin-binding motif 863 880 IPR000048 GO:0005515
Blo17g00272 1598 Pfam IQ calmodulin-binding motif 838 857 IPR000048 GO:0005515
Blo17g00272 1598 Pfam IQ calmodulin-binding motif 816 830 IPR000048 GO:0005515
Blo17g00272 1598 CDD MYSc_Myo11 73 774 IPR036018 -
Blo17g00272 1598 Pfam DIL domain 1419 1522 IPR002710 -
Blo17g00272 1598 ProSiteProfiles IQ motif profile. 885 914 IPR000048 GO:0005515
Blo17g00272 1598 PRINTS Myosin heavy chain signature 146 171 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo17g00272 1598 PRINTS Myosin heavy chain signature 193 220 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo17g00272 1598 PRINTS Myosin heavy chain signature 478 506 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo17g00272 1598 PRINTS Myosin heavy chain signature 89 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo17g00272 1598 PRINTS Myosin heavy chain signature 425 453 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo17g00272 1598 Gene3D - 249 306 - -
Blo17g00272 1598 Pfam Myosin head (motor domain) 61 534 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo17g00272 1598 Gene3D Kinesin motor domain 62 434 IPR036961 -
Blo17g00272 1598 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Blo17g00272 1598 ProSiteProfiles IQ motif profile. 908 937 IPR000048 GO:0005515
Blo17g00272 1598 ProSiteProfiles IQ motif profile. 860 889 IPR000048 GO:0005515
Blo17g00272 1598 SMART DIL_2 1418 1525 IPR002710 -
Blo17g00272 1598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 885 940 IPR027417 -
Blo17g00272 1598 SMART MYSc_2a 53 787 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo17g00272 1598 Gene3D Myosin VI head, motor domain, U50 subdomain 621 655 - -
Blo17g00272 1598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 836 IPR027417 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo17g00272 Blo18g00260 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00272 Blo-Chr17:2832739 Blo18g00260 Blo-Chr18:2747475 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00272 K10357 - pvy:116135440 2260.34