Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00280 ATGGAAGAGACGTCTACGGTGGTTGCAGTGCCATTTAGAGTAGGCAATCAAGTCTTTGATAGTCCAAATATAGCAATCCAGATGGATATCACAAGGCTTAAGCTGATGGCGGATACAGCCGGATTATTATCTGAGTCTTTAACCGAGGCCTCCTCTGAACTGGTTGAGATAATTGATGAGAATTGTAACGGTAGTGACGAGGACGAGAGAAAAGTATTTCCTTTACCAGATACTAGATCTCAAAACACGACCAACTGGGTGGTTTCTGGGGAGGTGGTGGCGGCCCAAGAAAGCAAGGAAGATGATTTCTTGTCAATGGAGGGTGATCACAATCTTGACAGCTCTTGTTCTCTTTCAGTAGTTAGTGAAAGTAGTAGCATATGTGGAGACGATTTCTTGGATTTTCAGACATCTTATGATGTTGAAAGAACTAGTTCTGCAGACATAGAGAAGCCGACTTGCAATGCTGATATTCTAGCCAAAGCCACCATTCTGGGGGACTCAACGATCGGGACAGAGATGGTCAGTGATCCTCTCGTTGTGGCAGGGGACCTCGAGGAAAATATTCGAAATGGTTTTGAACCTAATCCATCCAAAATTGTTCTTGAATTACCTCTTGTTGAAAAAGGAACCCGCCGTAGTGTTTTTGAAGTGAATTACGTTCCGCTTTGGGGTTTTACATCGGTGTGTGGAAGAAGACCTGAAATGGAAGACGCATATGCCACTGTACCTCGGTTTTTAGAGATTCCTGTTCAGATGCTTACTGACGACTGCACAAAAAGGCAGATATCTCATCAAACTGTTCATTTTTTCGGAGTATATGATGGCCATGGTGGTTTCCAGGTTGCAAACTACTGTCGCCAGCGTCTCCATATCGCTTTAGCAGAGGAGATTGAACTTGTTAAGGAAGGCTTATTAGCTGGGAGAATCAGTGAAAATTGCCAAGAACAGTGGACAAGAGTGCTTGTCAATTGTTTTCTCAAGGTTGATGCTGAAGTAGGAGGAAAATCTAGAACCGAGCCCGTTGCCTCGGTAATGGTCGGTTCAACTGCCGTTGCTGCAATAATCTGTGCATCGCATATCATAGTAGCCAACTGTGGCGATTCAAGGGCCGTGCTTTGTCGGGGGAAAGAGCCAGTGGCATTGTCAGTGGATCATAAGCCTAACAGAGAAGACGAATATGCGAGAATCGAGGCTGCTGGAGGAAAGGTCATTAACTGGAACGGGCTTCGTGTTTCTGGAGTTCTTGCAATGTCAAGATCTATCGGTGATGGATATTTGAAACCGTGGGTCATTCCAGAGCCGGAAGTGACTTTTGTCCCTCGAACCAGTGACGACAAATGTCTCATCCTAGCCAGCGATGGGTTATGGGACGTGATGTCCAACGAAGAGGCGTGCGACTTGGCTCGAAGACGAATCCTCCTCTGGCACAAGAAGAACGCCCTTAATCTAACCCAAGAATGGGTTGAAGGAGTCGACCCTGCGGCTCAAGCTGCAGCTGAGTATCTATCTAACCGGGCTCTTCAAAAGGGTAGCAAGGACAACATCACCGTGATTGTGGTGGACTTGAAAGCGCAGAGGAAGACAGCCCATGTTTTGGTTGTGTGA 1608 46.27 MEETSTVVAVPFRVGNQVFDSPNIAIQMDITRLKLMADTAGLLSESLTEASSELVEIIDENCNGSDEDERKVFPLPDTRSQNTTNWVVSGEVVAAQESKEDDFLSMEGDHNLDSSCSLSVVSESSSICGDDFLDFQTSYDVERTSSADIEKPTCNADILAKATILGDSTIGTEMVSDPLVVAGDLEENIRNGFEPNPSKIVLELPLVEKGTRRSVFEVNYVPLWGFTSVCGRRPEMEDAYATVPRFLEIPVQMLTDDCTKRQISHQTVHFFGVYDGHGGFQVANYCRQRLHIALAEEIELVKEGLLAGRISENCQEQWTRVLVNCFLKVDAEVGGKSRTEPVASVMVGSTAVAAIICASHIIVANCGDSRAVLCRGKEPVALSVDHKPNREDEYARIEAAGGKVINWNGLRVSGVLAMSRSIGDGYLKPWVIPEPEVTFVPRTSDDKCLILASDGLWDVMSNEEACDLARRRILLWHKKNALNLTQEWVEGVDPAAQAAAEYLSNRALQKGSKDNITVIVVDLKAQRKTAHVLVV 535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2952936 2955307 - BLOR16101 Blo17g00280 72668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00280 535 SUPERFAMILY PP2C-like 214 524 IPR036457 -
Blo17g00280 535 PANTHER ALPHABET, ISOFORM E-RELATED 112 528 - -
Blo17g00280 535 Pfam Protein phosphatase 2C 263 516 IPR001932 -
Blo17g00280 535 CDD PP2Cc 225 523 IPR001932 -
Blo17g00280 535 SMART PP2C_4 213 521 IPR001932 -
Blo17g00280 535 ProSiteProfiles PPM-type phosphatase domain profile. 223 523 IPR001932 -
Blo17g00280 535 ProSitePatterns PPM-type phosphatase domain signature. 270 278 IPR000222 GO:0043169
Blo17g00280 535 Gene3D - 210 532 IPR036457 -
Blo17g00280 535 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 112 528 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo17g00280 Blo18g00274 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00280 Blo-Chr17:2952936 Blo18g00273 Blo-Chr18:2890480 0 dispersed
Blo06g00743 Blo-Chr6:30639831 Blo17g00280 Blo-Chr17:2952936 1.51E-145 transposed
Blo08g00317 Blo-Chr8:4622255 Blo17g00280 Blo-Chr17:2952936 1.08E-11 transposed
Blo08g00318 Blo-Chr8:4623836 Blo17g00280 Blo-Chr17:2952936 4.22E-67 transposed
Blo17g00280 Blo-Chr17:2952936 Blo18g00271 Blo-Chr18:2877399 9.04E-54 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00280 K14497 - zju:107420119 690.263