Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00282 ATGCGTGCATTGGGCGACTATCTTGGTGTCAAGGTCCACGCATGTGTTGGTGGTACGAGTGTTCGTGAAGATCAGCATATTCTTTCTAGTGGGGGGTTCATGTTGTTGTTGGTACGCCTGGTCGTGTGTTTGAGGAGACAATCCTGTCAACCTGATCTTATAAAAATGTTTGTGTTAGACGAAGTAGATGAGATGCTTTCACGAGGTTTCAAGGATCAGATCTATGATATCTTCCAGTTGCTGCCGCCAAAAATTCAGTTTGGGGTTTTCTCTGCTACTATAGCACCTGAGGCTCTTGAGATAACAAGGAAGTTCATGAATAAACCTGTTCGTATTCTGGTAAAACGAGATGATCTCACCCTTGAGGGTATTAAGCAATTCCATGTCAATGTTGACAAGGAGGAATGA 408 43.38 MRALGDYLGVKVHACVGGTSVREDQHILSSGGFMLLLVRLVVCLRRQSCQPDLIKMFVLDEVDEMLSRGFKDQIYDIFQLLPPKIQFGVFSATIAPEALEITRKFMNKPVRILVKRDDLTLEGIKQFHVNVDKEE 135
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
17 2994560 2995057 + BLOR16103 Blo17g00282 72670
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00282 135 PANTHER RNA HELICASE 1 135 - -
Blo17g00282 135 PANTHER EUKARYOTIC INITIATION FACTOR 4A-11 1 135 - -
Blo17g00282 135 Pfam DEAD/DEAH box helicase 3 97 IPR011545 GO:0003676|GO:0005524
Blo17g00282 135 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 112 IPR014001 -
Blo17g00282 135 Gene3D - 1 123 IPR027417 -
Blo17g00282 135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 114 IPR027417 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00282 Blo-Chr17:2994560 Blo07g00625 Blo-Chr7:19593452 2.56E-34 dispersed
Blo17g00282 Blo-Chr17:2994560 Blo18g00276 Blo-Chr18:2930723 1.23E-74 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00282 K03257 - ini:109186383 220.705