Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo17g00282 | ATGCGTGCATTGGGCGACTATCTTGGTGTCAAGGTCCACGCATGTGTTGGTGGTACGAGTGTTCGTGAAGATCAGCATATTCTTTCTAGTGGGGGGTTCATGTTGTTGTTGGTACGCCTGGTCGTGTGTTTGAGGAGACAATCCTGTCAACCTGATCTTATAAAAATGTTTGTGTTAGACGAAGTAGATGAGATGCTTTCACGAGGTTTCAAGGATCAGATCTATGATATCTTCCAGTTGCTGCCGCCAAAAATTCAGTTTGGGGTTTTCTCTGCTACTATAGCACCTGAGGCTCTTGAGATAACAAGGAAGTTCATGAATAAACCTGTTCGTATTCTGGTAAAACGAGATGATCTCACCCTTGAGGGTATTAAGCAATTCCATGTCAATGTTGACAAGGAGGAATGA | 408 | 43.38 | MRALGDYLGVKVHACVGGTSVREDQHILSSGGFMLLLVRLVVCLRRQSCQPDLIKMFVLDEVDEMLSRGFKDQIYDIFQLLPPKIQFGVFSATIAPEALEITRKFMNKPVRILVKRDDLTLEGIKQFHVNVDKEE | 135 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 17 | 2994560 | 2995057 | + | BLOR16103 | Blo17g00282 | 72670 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo17g00282 | 135 | PANTHER | RNA HELICASE | 1 | 135 | - | - | |
| Blo17g00282 | 135 | PANTHER | EUKARYOTIC INITIATION FACTOR 4A-11 | 1 | 135 | - | - | |
| Blo17g00282 | 135 | Pfam | DEAD/DEAH box helicase | 3 | 97 | IPR011545 | GO:0003676|GO:0005524 | |
| Blo17g00282 | 135 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 1 | 112 | IPR014001 | - | |
| Blo17g00282 | 135 | Gene3D | - | 1 | 123 | IPR027417 | - | |
| Blo17g00282 | 135 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 2 | 114 | IPR027417 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo17g00282 | Blo-Chr17:2994560 | Blo07g00625 | Blo-Chr7:19593452 | 2.56E-34 | dispersed | |
| Blo17g00282 | Blo-Chr17:2994560 | Blo18g00276 | Blo-Chr18:2930723 | 1.23E-74 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo17g00282 | K03257 | - | ini:109186383 | 220.705 |