Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00287 ATGACTGCGACCACTTGTGTAGACTCCGAATCAGAACTCTGCCGAGATGACTCGGCTGCTTTCGTTCTCAAATTCATAGCCATGGCTTCCATTCTTGTCGCCGGGGTGGCTGGAATTGCCATTCCACTTGTCGGCAGACACCGGAGTTTCCTTAAAACAGACAGCAACCTCTTTGTCGCAGCAAAAGCCTTCGCCGCCGGCGTGATCCTCTCCACCGGATTTGTACACATGCTCTCCGGCGGGTCGGAGGCTCTGTCCAGCTCGTGTCTGCCCACTTTTCCTTGGTCCAAGTTTCCATTTTCCGGGTTTTTTGCTATGCTTGCAGCTCTCGTGACCCTTCTGGTTGATTTTGTTGGGACTCAATATTACGAGAGAAAGCAGGGACTGAGTCGATCGTACGAGGAGAAGGGTCAAGTCGGGACATTAGAGGCGGGGTTGGAATCTGAAATTGTTCCCGTCGAGGAGGCTAAAAAATGGAATGGCGAAGTGTTGGGGGAGGAAGAAGGAGATGGAAGGAAGACAGCGGAAATGCATTCTCATAGACATTCTCGTGGGAGTCGACATGGCGAGGAGGAGAGAGATGTTCGACATGTCGTGGTTTCGCAGATTCTAGAATTAGGAATCGTATCACACTCTGTGATCATTGGTCTATCACTTGGCGTTTCGCACAGTCCGTGCACAATAAGACCCTTAATAGCAGCTTTATCCTTCCACCAGTTCTTCGAAGGATTTGCACTCGGAGGATGCATCTCCCAAGTACAATTCGACCCCAAAACGACCACGATCATGGCTTGCTTTTTTGCTGTCACAACTCCAATCGGGATAGGCACGGGGATCACCGTTGCATCTTTGTACAATCCTCTGAGCTCCGGCGCATTGGTAGCGGAAGGGATATTCGATTCTCTTTCGGCCGGGATTCTGGTTTACATGGCCTTGGTGGATCTTATTGCAGCTGATTTTCAAAGCAAGAGAATGAGGTGCAATTTTAGACTGCAAGTAGTGTCTTATTTCATGCTTTTCTTTGGGGCTGGATTGATGTCTTTGCTTGCCATTTGGGCTTGA 1062 49.53 MTATTCVDSESELCRDDSAAFVLKFIAMASILVAGVAGIAIPLVGRHRSFLKTDSNLFVAAKAFAAGVILSTGFVHMLSGGSEALSSSCLPTFPWSKFPFSGFFAMLAALVTLLVDFVGTQYYERKQGLSRSYEEKGQVGTLEAGLESEIVPVEEAKKWNGEVLGEEEGDGRKTAEMHSHRHSRGSRHGEEERDVRHVVVSQILELGIVSHSVIIGLSLGVSHSPCTIRPLIAALSFHQFFEGFALGGCISQVQFDPKTTTIMACFFAVTTPIGIGTGITVASLYNPLSSGALVAEGIFDSLSAGILVYMALVDLIAADFQSKRMRCNFRLQVVSYFMLFFGAGLMSLLAIWA 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 3031609 3032864 + BLOR16108 Blo17g00287 72675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00287 353 MobiDBLite consensus disorder prediction 164 191 - -
Blo17g00287 353 TIGRFAM zip: ZIP zinc/iron transport family 6 353 IPR004698 GO:0005385|GO:0016021|GO:0071577
Blo17g00287 353 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 1 353 - -
Blo17g00287 353 Pfam ZIP Zinc transporter 22 350 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Blo17g00287 353 PANTHER ZINC/IRON TRANSPORTER 1 353 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00459 Blo-Chr4:3819238 Blo17g00287 Blo-Chr17:3031609 5.54E-90 dispersed
Blo13g00603 Blo-Chr13:28439667 Blo17g00287 Blo-Chr17:3031609 1.69E-95 dispersed
Blo17g00287 Blo-Chr17:3031609 Blo19g00071 Blo-Chr19:1747606 2.79E-58 dispersed
Blo03g01479 Blo-Chr3:41571753 Blo17g00287 Blo-Chr17:3031609 3.85E-14 transposed
Blo17g00287 Blo-Chr17:3031609 Blo18g00284 Blo-Chr18:2973853 2.32E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00287 K14709 - jre:109005112 491.115