Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00290 ATGATAAGAGCGTCATTTTTGTCCGAGCCTCGCCTTTTCTTCATCTCTACTCCAATTTTCTTCGTTTTTTGTTCGACGGTTTTATTTTCGTCGGTTTCTTTCGCCGCTCTTCCGGTGACGGAGTTGGATCCGTCCTTGCTTCTCAACACCACCACCGACTCCGTTAACGCCTCCGTATCTAGGAATAAGGAGGGTAGTTTTGCAGACATTATTGATCGAGCTCTGGAGAATGAATTTAAAGAGAGTGATCAGAACGAAGCAACTGATGCTGGAAGCTTCAACAGCAGTGTAGCGGAGCAGCAGGCTGTTTTGGAGACTGTAGCTCGGGTTAAGCCAAAGAAAAATGAAACCAAAGAGGAAAAATCATTTCAACTTCATGATGTTTTCAACTTGGACAATGATAACAGAGCAGAAGATACACCGACACTGATAGATCGCAAGGACAATGTTTTTATTATATCTAACTTCAAATCTAAATATCCAGTGCTGCAGTTAGACTTGAGATTAATATCAGATTTGGTAGTTGTTATTGTGTCTGCAACTTGTGGAGGAATTTCCTTTGCTTGTGCCGGACAACCAGTTATCACAGGATATTTGCTTGCTGGATCTGTTATTGGACCCGGAGGATTCAACTTTGTCAGCGAAATGGTGCAAGTCGAAACTGTTGCTCAGTTTGGTGTAATTTTTCTTCTTTTTGCACTGGGCCTGGAATTCTCAACAGCGAAGCTTCGAGTTGTTCGAGCAGTTGCTGTCCTAGGGGGACTGCTGCAAATTTTGCTATTTATGTGCCTCAGTGGAGTCACCGCTTCAGTGTCTGCTGTTATCACTTATTCTTATCTCTTTGATTCAACTCTTACTTATAATTTGTATGGACTTGTGAAGCACTATGGATGGAGATATTCTGAGACTTCTATAGATTTGTGTGGTGGAAATGCTTCGGAGGGAGTATTTGTTGGCACATTTCTTTCTATGTCTTCAACAGCTGTGGTTTTGAAGTTTTTGATGGAAAAGAACTCGACAAATGCTCTTCATGGCCAAGTAACCATTGGCACTCTTATCATGCAGGATTGTGCCGTAGGTTTGCTGTTTGCTTTCCTTCCTGTTCTGGGTGCGACTTCTGGTGTGCTTCAAGGAGTAATTTCCATGACTAAACTATTCCATATGTATGCGGTTGATAAAAAAAAATTAATGGCTTCTAAAGGCATGGAATTCTTATATTGCTTGATTTTTAACTGTATTGCTTGTTATGATTTCCCTTATGTCTGA 1266 41.15 MIRASFLSEPRLFFISTPIFFVFCSTVLFSSVSFAALPVTELDPSLLLNTTTDSVNASVSRNKEGSFADIIDRALENEFKESDQNEATDAGSFNSSVAEQQAVLETVARVKPKKNETKEEKSFQLHDVFNLDNDNRAEDTPTLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVVVIVSATCGGISFACAGQPVITGYLLAGSVIGPGGFNFVSEMVQVETVAQFGVIFLLFALGLEFSTAKLRVVRAVAVLGGLLQILLFMCLSGVTASVSAVITYSYLFDSTLTYNLYGLVKHYGWRYSETSIDLCGGNASEGVFVGTFLSMSSTAVVLKFLMEKNSTNALHGQVTIGTLIMQDCAVGLLFAFLPVLGATSGVLQGVISMTKLFHMYAVDKKKLMASKGMEFLYCLIFNCIACYDFPYV 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 3059252 3062969 + BLOR16111 Blo17g00290 72678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00290 421 Pfam Sodium/hydrogen exchanger family 174 377 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Blo17g00290 421 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 305 388 IPR045158 GO:0015386|GO:0071805|GO:1902600
Blo17g00290 421 PANTHER K(+) EFFLUX ANTIPORTER 6 25 273 - -
Blo17g00290 421 Gene3D - 167 392 IPR038770 -
Blo17g00290 421 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 25 273 IPR045158 GO:0015386|GO:0071805|GO:1902600
Blo17g00290 421 PANTHER K(+) EFFLUX ANTIPORTER 6 305 388 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo16g00598 Blo-Chr16:24430924 Blo17g00290 Blo-Chr17:3059252 3.86E-19 dispersed
Blo01g01470 Blo-Chr1:53950899 Blo17g00290 Blo-Chr17:3059252 0 wgd
Blo17g00290 Blo-Chr17:3059252 Blo18g00286 Blo-Chr18:3002232 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00290 - - mnt:21402452 513.842