Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00295 ATGGGTCTCTGCGAATCTGCTTCATGTTTTAGGGTTCATGAGAATGAGAGTGGCAAGGAAAATTTAGTAATTGTGCAAGGAAGTGACGCCTCTACAGGGTTTCAGACACGTGGGTCTCTTTGTTCTAAGCAAGGAAGCAAAGGACTGAACCAAGATGCTGCCATCTTTTGCCAGGAATATGGAGTAGAAGAGGGTGCCTTTTGTGGAGTTTTTGATGGCCATGGAAAGAACGGCCACATAGTGAGCAACACGGTGAAAACCAGACTTCCATTACTGTTACTTGGCCAAAGAAATGCTCTGGAAAAAATCCATACCTTTGAAGACGAAGTAAATGGTGATTCTCAACATAACATCGTTGGGAGATCAGACGGTCAGAAGGAACCCAGCAAGAACTTCGTCAAATGGATGGAGGCTGTGGGAAAAGCCTTCAAGCTGATGGATAGGGAGATCGAGTTTCAAGAGAATTTTGATTTCTCATGCAGCGGAACGACAGCCGTAGCTGTTGTAAAACAGCAGGGGGAAGATCTTGTAATAGCTAATTTGGGAGATTCAAGAGCTGTATTAGGTAGAATTACCGATGATGGAATCAAAGCCATTCAATTAACCACTGATTTAAGACCCGGCTTACCCACTGAAGCAGATAGAATAACTAGGTGCAATGGTCGAATAATGGCGCTGAAAGACCAACCGCAGATCCCGCGAGTGTGGATGCCGAAAGAAGATTATCCCGGCCTGGCCATGTCAAGAGCATTTGGTGATTTCTGTCTCAAGAAACATGGCATAATTGCTGTCCCGGAAATCTCTTATCGCTGCTTAAGTCCCAATGACCAGTTTATCGTTCTAGCGACTGATGGGGTGTGGGATGTGCTAAGTAATAGCCAAGTGGCAACCATGGTGTGGAGAGCTTGTAATGAAGAGGCAGCAGCAGAAGCAGTGGTGGGGGCAGCCATGGCAGCATGGAAGAAAAGGTGTCCATTGTCAAAGGTCAAGATCGATGACTGCACTGTAGTGTGCCTCTTCCTCCACAAGCAAAGATGA 1038 46.05 MGLCESASCFRVHENESGKENLVIVQGSDASTGFQTRGSLCSKQGSKGLNQDAAIFCQEYGVEEGAFCGVFDGHGKNGHIVSNTVKTRLPLLLLGQRNALEKIHTFEDEVNGDSQHNIVGRSDGQKEPSKNFVKWMEAVGKAFKLMDREIEFQENFDFSCSGTTAVAVVKQQGEDLVIANLGDSRAVLGRITDDGIKAIQLTTDLRPGLPTEADRITRCNGRIMALKDQPQIPRVWMPKEDYPGLAMSRAFGDFCLKKHGIIAVPEISYRCLSPNDQFIVLATDGVWDVLSNSQVATMVWRACNEEAAAEAVVGAAMAAWKKRCPLSKVKIDDCTVVCLFLHKQR 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 3099904 3101372 + BLOR16116 Blo17g00295 72683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00295 345 SUPERFAMILY PP2C-like 29 342 IPR036457 -
Blo17g00295 345 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 344 - -
Blo17g00295 345 PANTHER ALPHABET, ISOFORM E-RELATED 1 344 - -
Blo17g00295 345 Pfam Protein phosphatase 2C 125 318 IPR001932 -
Blo17g00295 345 CDD PP2Cc 37 341 IPR001932 -
Blo17g00295 345 Gene3D - 22 344 IPR036457 -
Blo17g00295 345 SMART PP2C_4 27 339 IPR001932 -
Blo17g00295 345 ProSiteProfiles PPM-type phosphatase domain profile. 37 341 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00295 Blo-Chr17:3099904 Blo17g00516 Blo-Chr17:8221869 5.16E-95 dispersed
Blo01g01476 Blo-Chr1:54038030 Blo17g00295 Blo-Chr17:3099904 4.79E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00295 - - vvi:100266178 420.239