Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00308 ATGGAGTCCCTCGTTGAAGGCGTGAGTTCTTTCCCGAAAGGCAAGAATTCGACGGCTTTAAGACATCTGAAACAATCAAAATATGAAGCAGCTTCTTCAACATCCAACATGGCTTCTCACTGTAATGGCAAGACAACTAGGCGCGTAAATGGTTCTGCAGTTAGTCGAAAGCATCCTCATAATGTGGCTCTTGAAAATTTACAGCTCGAAGGATTTTCTAGTATGGCTAAACACGCGACGAAGGGAAAATCTGAATGTGTTTGTTCGAATGAAACTTCTTCCCAAAAGACGATTTCTAGGGCTGGAGCAGAATCCGATCATTACAAGGATTGTAGTTTGAATGGCACTTTTACTTTCGGTCGATCAAAAGATGGAGTGACCTCTTTTCCTAGCCCTCAAAATAGTTTATATTCTACAACAGTATACGCCGAAGCCAAACAGAGTTTCTCCAATACAGAAGTCAGCGAAGGGACGAAGAGTATCGAAAAGCCGGGGGAGAGCTGCGAAGTTTCTAATTCTTGTGATTTTAACAGGAGCTGGAAAACAGGAATTTACAGAGGCAGCACAGGCAGTGATGTAAGCGATGAGAGCAACTCAAGTGGCTTGAGCAGTGCTATGTATAAACCCCACAAAGCCAATGATTCGAGATGGGAGGCAATTCAAGCAGTTCGATCTCGAGAAGGGTTATTGGGACCTAACCAATTCAGATTATTGAAGACGTTAGGCCGTGGAGATATAGGCAGTGTTTATCTCTCTGAGTTAACTGGTACGAGAACTTATTTTGCGATGAAGTTGATGAACAAAGCCGATCTGGCGAGCCGAAAGAAGCTTTTGAGGGCTCAGACGGAAAGAGAAATACTACAATCTCTAGATCATCCGTTTCTGCCGACTCTTTATACGCATTTTGAGACGGAGAAATTCTCTTGTTTGTTAATGGAGTTTTGCCCGGGAGGAGACTTGCACCACCTCCGGCAAAGACGACCCGGCAAGTATTTCCCCGAGCATGCTGCCAGGTTTTATGTGGCGGAGGTGCTCCTTGCTTTGGAGTATCTGCATATGCTAGGAATTATCTACAGAGACCTCAAACCGGAGAATGTTTTGGTGAGGGAAGATGGGCATATAATGCTATCAGATTTTGATCTCTCTTTAAGATGTGTAGTCTCACCAACTCTGGTTAAATCGACAAACTCGAGCTTAGAGTCGAAGAACTCTGCATATTGCATTCGGCCTGCGTGTATCCAGCCGACCTGTGCAATGCAGCCTGATTGCATCCAACCGTCCTGTTTCACCCCTCGCTTTTTATCGAGCAGGTCTAAGAAACCGAGGAAGGCGAAGCAAAAGAACGAAATATCTCATCAAGTGACTCCTCTCCCCGAGCTCATTGCCGAACCCACCAGTGCTCGGTCCATGTCATTTGTCGGTACCCACGAGTACTTGGCTCCTGAAATAATCAAAGGGGAAGGCCATGGAAGTGCTGTCGATTGGTGGACTTTCGGGATTTTTCTCTACGAGCTTCTCTTCGGCGAAACTCCGTTCAAAGGGCCTGGAAATCGAGCCACTCTTTTTAATGTCATTGGGCAGCCGTTGAGATTTCCCGAGTCTCCTACGGTGAGTTTTGCGGCGAGGGACTTGATCAGAGGCTTACTCGTTAAAGAGCCACAGCATCGTCTTGCTTATAGACGGGGGGCGACTGAGATCAAACAGCATCCGTTTTTTCAGAGCGTTAATTGGGCTCTGATTCGGTGTGAAACTCCGCCCGAAGTGCCGAGGACGGAGATCCCAGAAGTACCCATTGCCGAGAAGGTGCCTGGATTCGACGTAAAGGCTTCAGAGGATTGGCACATGGCTTGGCTTCTTAACTGCAGAGGAATTGCGAAGAAAGTAAGAAATGCGACTCAATCAGCTGCTTATCAAGTTAAAGATTGTGGGGCGAAGCGAGAATGTCCCAACTGTCACTATCTTATAAACAATACTGACTCTCCCGAATGGCCAGGTCTGCCTGGTGGAGTAAAATTTGATCCATCTGATACTGAATTATTAGGCCATTTGGCTGCAAAATGTGGAGTTGAAAACTCACAGCCACACATGTTCATCGACGAGTTCATCCCAACACTCGATACTGATCAAGGAATTTGCTATACGCACCCCGAAAATCTTCCCGGTATTACAAAAGATGGAACCAGTGTCCATTTCTTCCACAAAACAAGCAATGCGTATGCGACCGGTCAAAGGAAGCGCCGCAAAATTCAGAGACATTATAGTTATGCCGAGGATGTTCGATGGCACAAAACTGGTAAGACCAAAGCTGTTATGGAGAATGGTGTTCAAAAAGGATGTAAGAAGATCATGGTTCTCTACAAAAGTGCGAAGAAGGGATCGAAGCCCGATAAGTCAAAGTGGGTGATGCATCAATATCATTTGGGGACTGAAGATGAGAAGGAAGGAGAATATGTAGTCTCAAAAGTTTTCCATCAACAGCAGAAACAGTTCGAGAAGAACGACGACAATAACAATAACAATATTGAAATTGAAAATTCGGAAGTCAAGAAAATCGAAACTAGTCCGAGGACTCCCAAGGCTAATCCTCCTCCTCCACCTCGGCCTGTAAAGTCTGAACATTCTAAAGGAAAGAGTGTCTTTCAGTCAGTTCTCCAGGAAGAAGATTTTGCACCTGAATTATATCAGGCCGGTCCTTCGTCTGTCCCGTTTGAAGCCAATACAGATTACTCGGCCTGGTTGGCTGGAGAATCTCAAGCTATAGAAAACTGCGATTTGAATAACTTGGAATACGACAACCTATTGTGCCAGGAAATATTCGATAGCTATACGCTTGGAAATGATTTGAAACTCGATCAAGTCGATCAAAACCCAAATAAAGAGACAGAACGGAACAATGTTTCGTGCGGAATTGCCGACCTTGATAACATAGATTTAGACACTCCTCCTGATTTCCAGCTTGCTACCGACGAGATGAAGTTTCCCCTTTTCTTTTGGATTCGTCTTCTCCATTATCTCGGATTTTTGAATTCTTCGAAGGTGCAACATATGGAGAAGAAGCAGCTGATGGAGTGGATTTGA 3078 45.03 MESLVEGVSSFPKGKNSTALRHLKQSKYEAASSTSNMASHCNGKTTRRVNGSAVSRKHPHNVALENLQLEGFSSMAKHATKGKSECVCSNETSSQKTISRAGAESDHYKDCSLNGTFTFGRSKDGVTSFPSPQNSLYSTTVYAEAKQSFSNTEVSEGTKSIEKPGESCEVSNSCDFNRSWKTGIYRGSTGSDVSDESNSSGLSSAMYKPHKANDSRWEAIQAVRSREGLLGPNQFRLLKTLGRGDIGSVYLSELTGTRTYFAMKLMNKADLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLLMEFCPGGDLHHLRQRRPGKYFPEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCVVSPTLVKSTNSSLESKNSAYCIRPACIQPTCAMQPDCIQPSCFTPRFLSSRSKKPRKAKQKNEISHQVTPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGETPFKGPGNRATLFNVIGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCETPPEVPRTEIPEVPIAEKVPGFDVKASEDWHMAWLLNCRGIAKKVRNATQSAAYQVKDCGAKRECPNCHYLINNTDSPEWPGLPGGVKFDPSDTELLGHLAAKCGVENSQPHMFIDEFIPTLDTDQGICYTHPENLPGITKDGTSVHFFHKTSNAYATGQRKRRKIQRHYSYAEDVRWHKTGKTKAVMENGVQKGCKKIMVLYKSAKKGSKPDKSKWVMHQYHLGTEDEKEGEYVVSKVFHQQQKQFEKNDDNNNNNIEIENSEVKKIETSPRTPKANPPPPPRPVKSEHSKGKSVFQSVLQEEDFAPELYQAGPSSVPFEANTDYSAWLAGESQAIENCDLNNLEYDNLLCQEIFDSYTLGNDLKLDQVDQNPNKETERNNVSCGIADLDNIDLDTPPDFQLATDEMKFPLFFWIRLLHYLGFLNSSKVQHMEKKQLMEWI 1025
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 3261679 3269190 + BLOR16129 Blo17g00308 72696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00308 1025 Gene3D NAC domain 675 830 IPR036093 GO:0003677|GO:0006355
Blo17g00308 1025 MobiDBLite consensus disorder prediction 845 880 - -
Blo17g00308 1025 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 49 598 - -
Blo17g00308 1025 ProSiteProfiles NAC domain profile. 666 825 IPR003441 GO:0003677|GO:0006355
Blo17g00308 1025 PANTHER FLIPPASE KINASE 1-RELATED 49 598 - -
Blo17g00308 1025 MobiDBLite consensus disorder prediction 187 206 - -
Blo17g00308 1025 SUPERFAMILY Protein kinase-like (PK-like) 211 592 IPR011009 -
Blo17g00308 1025 ProSiteProfiles Protein kinase domain profile. 235 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00308 1025 Pfam Protein kinase domain 469 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00308 1025 Pfam Protein kinase domain 236 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00308 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 356 368 IPR008271 GO:0004672|GO:0006468
Blo17g00308 1025 Gene3D Phosphorylase Kinase; domain 1 233 318 - -
Blo17g00308 1025 CDD STKc_phototropin_like 234 590 - -
Blo17g00308 1025 SUPERFAMILY NAC domain 658 825 IPR036093 GO:0003677|GO:0006355
Blo17g00308 1025 Pfam No apical meristem (NAM) protein 667 807 IPR003441 GO:0003677|GO:0006355
Blo17g00308 1025 Gene3D Transferase(Phosphotransferase) domain 1 467 590 - -
Blo17g00308 1025 SMART serkin_6 235 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo17g00308 1025 Gene3D Transferase(Phosphotransferase) domain 1 319 386 - -
Blo17g00308 1025 MobiDBLite consensus disorder prediction 187 207 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo17g00308 Blo18g00323 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00963 Blo-Chr1:25067406 Blo17g00308 Blo-Chr17:3261679 0 dispersed
Blo11g00163 Blo-Chr11:1283245 Blo17g00308 Blo-Chr17:3261679 0 dispersed
Blo16g01052 Blo-Chr16:39029695 Blo17g00308 Blo-Chr17:3261679 1.62E-69 dispersed
Blo18g00320 Blo-Chr18:3347060 Blo17g00308 Blo-Chr17:3261679 6.20E-142 dispersed
Blo18g00321 Blo-Chr18:3356778 Blo17g00308 Blo-Chr17:3261679 6.18E-132 dispersed
Blo18g00323 Blo-Chr18:3364391 Blo17g00308 Blo-Chr17:3261679 0 transposed
Blo17g00308 Blo-Chr17:3261679 Blo18g00319 Blo-Chr18:3341069 1.65E-117 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13509 PF00069 Pkinase 3.10E-36 CL0016 Blo TF
84790 PF00069 Pkinase 3.10E-36 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00308 K08286 - csv:101219962 880.552