Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00322 ATGGAAGTTTATTATTTGCATGACCATTGCATTTTATCTCCTATTCCTCTTTTTTCTTCCCCTTTGAACCGGCCTTCTTCTGTTCAAATTTCCGTCTCTGCGCGTAGAAAATCTCCTCTTTTGCGTTCCTTAAGATTAGTAAATGGAAGAAATTTGTGCTTCGCTTCCAGCTCCGACACACTCGTCGCTGGCTCGTGCAAAGAGGATGGGAAGCGCCGGGAAGTAGCTGGTGGCAAGGAAGAAGATGATTTTGGTGACTTGAAATCCTGGATGCTCAGGAATGGACTTCCTCCTTGCAAGGTTGATCTCGGGGAGAGGCCCTCACACGATGATAGACACAGGTCTATCCATTACGTTTCTGCGAGCGTAGATCTTCAGGCAGGTGATGTTGCATTTTCTGTACCGAACTCCTTGGTGGTGACTCTGGAGAGAGTTTTGGGGAACGAGACCGTAGCGGAATTGTTAACTACCAATAAGTTGTCAGAATTGGCATGCTTGGCTTTATATTTGATGTATGAGAAGAAGCAAGGAAAGAAGTCTTTCTGGTATCCATACATAAGAGAGCTTGATCGTCAGAGAGGCAGAGGCCAGTTAGCTGTTGAGTCGCCTCTTCTGTGGTCACAAACTGAACTGGATTATCTAACAGGAAGTCCCACAAAGGCTGAAGTTCTTGAAAGGGCTGAAGGAATTAAGAGGGAGTATAATGAGCTTGACACGGTGTGGTTTATGGCCGGATCTCTATTTCAGCAATACCCATATGATATTCCTACTGAAGCATTCCCATTTGAGATTTTCAAACAAGCTTTTGTTGCAGTTCAGTCATGTGTGGTGCATTTGCAGAAGGTGAGTCTAGCTCGGAGGTTTGCTTTGGTTCCCCTTGGTCCTCCATTATTAGCTTACAGAAGCAACTGCAAGGCAATGTTGACTGCTGTTGATGGTGAAGTGCAATTGGTAGTTGATCGGCCATACAAGACTGGGGATGCTATTGTCGTTTGGTGTGGACCTCAGCCTAATTCAAGGTTGCTTCTAAACTATGGTTTTGTGGATGAAGATAACTCTTATGATCGTTTAGTTGTTCAGGCTGCTTTGAGTACTGATGATCCTCAGTATCAGGAAAAAAGATTGGTAGCGCAAAGGAATGGAAAGCTATCAATACAAGCTTTTCAAATTTGTGTTGGAAAGGAAAAAGAAGCAGTGTCAGATATGCTTCCTTATCTTCGACTAGGCTATGTTTCTGATCCTTCTGAGATGCAATCCGTTATTTCTTCTCAAGGTCCAATTTGTCCGGTGAGCCCCTGTATGGAACGAGCAGTGCTGGACCAACTTGCAAATTATTTTGAGAGACGACTGGCAGGGTACCCAACTACTTTGAGTGAAGACGAATCTTTGGGTTCTGTACTGTATCAGTTCGTGTTATATGCTCCTTTATCGGAGTTTACTCTTCGTAATTCGTTTTTTCATAATTTATCTGGCTTTTTGCTTCGGGGATTTTTTTTATATAGATTCGCTGAAATGGCTGGGGGAATGATGTGGCAGTTACTGAGGAGGAAACTTCAATCGCACCATTCTGCCTCGCCATATCTTTCATCCCTTGTCTCTAAGAAAGATGATCTTGGATCTGGTGGTGTAAAGTCTCTTAGAGCTCTTGCACTCGTGGGAGCTGGTGTTTCTGGGCTCTTGAGTTTTGCGACAATAGCATCTGCAGATGAAGCCGAACATGGCTTGGAATGTCCAAGCTATCCCTGGCCTCACAAGGGTATTCTGAGTTCATATGATCATGCATCGATCCGTCGTGGCCATCAAGTTTACCAACAAGTCTGCGCGTCATGTCATTCTATGTCTTTAATATCATACCGTGATTTGGTCGGTGTTGCATATACAGAAGAGGAGACAAAAGCAATGGCTGCTGAAATTGAGGTTGTTGATGGGCCTAATGATGAGGGTGAGATGTTCACTCGTCCTGGAAAACTCAGTGATCGGTTTCCTCAACCATATTCCAATGAACAAGCTGCTAGGTTTGCCAATGGAGGGGCATATCCACCTGATTTAAGTCTCATAACAAAAGCCCGACACAATGGACAGAACTATGTCTTTGCCCTTCTAACTGGTTACCGTGATCCACCTGCTGGTGTTTCGATACGAGAGGGTTTGCACTATAATCCTTATTTTCCTGGGGGTGCTATTGCAATGCCTAAAATGCTTAACGATGGGGCTGTTGAGTATGAGGATGGTACTCCTGCAACAGAAGCTCAGATGGGAAAAGATGTTGTGTCGTTCTTGTCATGGGCTGCAGAACCCGAAATGGAAGAGAGGAAACTGATGGGATTCAAATGGATATTTGTTCTCTCGCTTGCTTTACTTCAGGCAGCCTATTACCGACGCTTGAAGTGGTCAGTTCTCAAGTCTCGCAAGCTAGTTCTTGACGTGGTGAACTAG 2436 44.46 MEVYYLHDHCILSPIPLFSSPLNRPSSVQISVSARRKSPLLRSLRLVNGRNLCFASSSDTLVAGSCKEDGKRREVAGGKEEDDFGDLKSWMLRNGLPPCKVDLGERPSHDDRHRSIHYVSASVDLQAGDVAFSVPNSLVVTLERVLGNETVAELLTTNKLSELACLALYLMYEKKQGKKSFWYPYIRELDRQRGRGQLAVESPLLWSQTELDYLTGSPTKAEVLERAEGIKREYNELDTVWFMAGSLFQQYPYDIPTEAFPFEIFKQAFVAVQSCVVHLQKVSLARRFALVPLGPPLLAYRSNCKAMLTAVDGEVQLVVDRPYKTGDAIVVWCGPQPNSRLLLNYGFVDEDNSYDRLVVQAALSTDDPQYQEKRLVAQRNGKLSIQAFQICVGKEKEAVSDMLPYLRLGYVSDPSEMQSVISSQGPICPVSPCMERAVLDQLANYFERRLAGYPTTLSEDESLGSVLYQFVLYAPLSEFTLRNSFFHNLSGFLLRGFFLYRFAEMAGGMMWQLLRRKLQSHHSASPYLSSLVSKKDDLGSGGVKSLRALALVGAGVSGLLSFATIASADEAEHGLECPSYPWPHKGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYSNEQAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLKWSVLKSRKLVLDVVN 811
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 3367831 3376649 - BLOR16143 Blo17g00322 72710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00322 811 Gene3D - 767 810 - -
Blo17g00322 811 Gene3D set domain protein methyltransferase, domain 1 81 348 - -
Blo17g00322 811 PRINTS Cytochrome C1 signature 716 727 IPR002326 GO:0009055|GO:0020037
Blo17g00322 811 PRINTS Cytochrome C1 signature 645 665 IPR002326 GO:0009055|GO:0020037
Blo17g00322 811 PRINTS Cytochrome C1 signature 600 619 IPR002326 GO:0009055|GO:0020037
Blo17g00322 811 PRINTS Cytochrome C1 signature 678 702 IPR002326 GO:0009055|GO:0020037
Blo17g00322 811 PRINTS Cytochrome C1 signature 747 766 IPR002326 GO:0009055|GO:0020037
Blo17g00322 811 PRINTS Cytochrome C1 signature 766 781 IPR002326 GO:0009055|GO:0020037
Blo17g00322 811 PRINTS Cytochrome C1 signature 580 599 IPR002326 GO:0009055|GO:0020037
Blo17g00322 811 PRINTS Cytochrome C1 signature 727 746 IPR002326 GO:0009055|GO:0020037
Blo17g00322 811 Pfam Rubisco LSMT substrate-binding 365 463 IPR015353 -
Blo17g00322 811 Gene3D - 571 766 IPR036909 GO:0009055|GO:0020037
Blo17g00322 811 SUPERFAMILY SET domain 84 353 IPR046341 -
Blo17g00322 811 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 344 463 IPR036464 -
Blo17g00322 811 ProSiteProfiles Cytochrome c family profile. 594 701 IPR009056 GO:0009055|GO:0020037
Blo17g00322 811 PANTHER RUBISCO METHYLTRANSFERASE FAMILY PROTEIN 46 463 - -
Blo17g00322 811 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 766 810 IPR021157 -
Blo17g00322 811 Pfam Cytochrome C1 family 582 798 IPR002326 GO:0009055|GO:0020037
Blo17g00322 811 Gene3D - 350 472 IPR036464 -
Blo17g00322 811 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 46 463 - -
Blo17g00322 811 SUPERFAMILY Cytochrome c 575 765 IPR036909 GO:0009055|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00589 Blo-Chr10:17582778 Blo17g00322 Blo-Chr17:3367831 6.38E-11 transposed
Blo13g00444 Blo-Chr13:24743707 Blo17g00322 Blo-Chr17:3367831 2.89E-26 transposed
Blo17g00322 Blo-Chr17:3367831 Blo18g00305 Blo-Chr18:3190526 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00322 - - vvi:100255895 752.281