Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo17g00352 | ATGGCTGGAGCAGTTCATCTCAGCTCAATCTTTCTAGTTTCATTGGCTTTGTTAGTCCCCGCCCTTCATGCGGACATCGCCGAGTTCGATGACTACTGGCTTCATCGAGCCCAGGAAGCTGAGAAGGCGGCTCTCGAGGCCTATCAGCCCGATCCCTTCAACGTCACCAACCAATTCAATATTCATGTTCACAGGGTTGTGGCAGCTAGAGTGGGGACTAACAGCACGAGGCGGAACCTGAGAGGATCAAACAAAAACAAAGGGCGATGTGTGGCCACAAATCCAATAGATCGATGCTGGCGGTGCGACAGGAACTGGGCTAGGAATCGTAAGCGGCTAGCTAGGTGTGCGCTTGGCTTCGGGAGGAGGACGACTGGAGGACTCAAAGGTCGCATTTACGTCGTCACCGACCCATCAGACTGGAATGTCTTGAACCCTAAACCCGGAACCCTCCGTCATGCAGTGATCCAGAAGCAGCCACTCTGGATCATCTTCGCACGGAGCATGGTCATTAAACTCTCGCAGGAGCTCATAATCACGAGCCACAAGACTATCGACGCTCGAGGGGCGAAGGTTCACATAGCTTACGGGGCGGGATTGACTATCCAATTTGTGAGGAATGTTATAATTCATGGGCTTCGTATACATGACATAGTGTCAGCTTCAGGTGGGATGATAAGGGATTCTGTTGAACATTATGGGCTCAGAACAGCCAGTGATGGAGATGGGATTTCTATATTTGGAGCAACCGACGTTTGGCTGGACCATCTTTCCATGTCCAACTGCCAAGATGGATTGATCGACGCCATTCAAGGATCGACGGCCATCACTATCTCGAATTCTCACTTCACCGATCACAATGATGTGATGCTGTTCGGCGCCAGCGACGTCTACAGAGGGGACAAGATAATGCAAGTGACGGTGGCGTTCAACCATTTCGGGAAAGGGTTGGTGCAGAGAATGCCGAGATGTAGGTGGGGATTCGTCCACGTCGTCAACAATGACTATACCCACTGGCTAATGTACGCCATTGGAGGAAGCTCCGAACCCACCATTATCAGCCAAGGCAACCGCTTCATCGCTCCCCACAACCAGGCCGCAAAAGAGGTGACCAAGAGAGACTACGCCCCGAAAAGCGTCTGGCAGAACTGGACCTGGCGGTCGCAGGGCGACCTTATGAAGAACGGAGCTTTCTTCGTCCAATCTGGAAGGCCTTTGACGGTAAAGGCATTTAGCAGGCACGATATGATCAAGGCCAAGCCTGGGAATTTTGTTGCGAGGCTCACTCGCTTCTCTGGCTCGCTCAGCTGCCGGGTGGGTCGGCCATGCTAG | 1332 | 52.63 | MAGAVHLSSIFLVSLALLVPALHADIAEFDDYWLHRAQEAEKAALEAYQPDPFNVTNQFNIHVHRVVAARVGTNSTRRNLRGSNKNKGRCVATNPIDRCWRCDRNWARNRKRLARCALGFGRRTTGGLKGRIYVVTDPSDWNVLNPKPGTLRHAVIQKQPLWIIFARSMVIKLSQELIITSHKTIDARGAKVHIAYGAGLTIQFVRNVIIHGLRIHDIVSASGGMIRDSVEHYGLRTASDGDGISIFGATDVWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTDHNDVMLFGASDVYRGDKIMQVTVAFNHFGKGLVQRMPRCRWGFVHVVNNDYTHWLMYAIGGSSEPTIISQGNRFIAPHNQAAKEVTKRDYAPKSVWQNWTWRSQGDLMKNGAFFVQSGRPLTVKAFSRHDMIKAKPGNFVARLTRFSGSLSCRVGRPC | 443 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 3723371 | 3724942 | + | BLOR16173 | Blo17g00352 | 72740 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo17g00352 | 443 | PRINTS | Pollen allergen Amb family signature | 116 | 133 | IPR018082 | - | |
Blo17g00352 | 443 | PRINTS | Pollen allergen Amb family signature | 140 | 165 | IPR018082 | - | |
Blo17g00352 | 443 | PRINTS | Pollen allergen Amb family signature | 384 | 408 | IPR018082 | - | |
Blo17g00352 | 443 | PRINTS | Pollen allergen Amb family signature | 240 | 261 | IPR018082 | - | |
Blo17g00352 | 443 | PRINTS | Pollen allergen Amb family signature | 342 | 361 | IPR018082 | - | |
Blo17g00352 | 443 | PRINTS | Pollen allergen Amb family signature | 320 | 339 | IPR018082 | - | |
Blo17g00352 | 443 | PRINTS | Pollen allergen Amb family signature | 414 | 437 | IPR018082 | - | |
Blo17g00352 | 443 | PRINTS | Pollen allergen Amb family signature | 176 | 192 | IPR018082 | - | |
Blo17g00352 | 443 | Pfam | Pectate lyase, N terminus | 26 | 80 | IPR007524 | GO:0030570 | |
Blo17g00352 | 443 | PANTHER | PECTATE LYASE 18-RELATED | 7 | 443 | IPR045032 | GO:0030570 | |
Blo17g00352 | 443 | SMART | amb_all | 168 | 365 | IPR002022 | - | |
Blo17g00352 | 443 | Gene3D | - | 93 | 436 | IPR012334 | - | |
Blo17g00352 | 443 | PANTHER | PECTATE LYASE | 7 | 443 | - | - | |
Blo17g00352 | 443 | SUPERFAMILY | Pectin lyase-like | 94 | 433 | IPR011050 | - | |
Blo17g00352 | 443 | Pfam | Pectate lyase | 188 | 359 | IPR002022 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g00418 | Blo-Chr1:4714030 | Blo17g00352 | Blo-Chr17:3723371 | 0 | dispersed | |
Blo17g00352 | Blo-Chr17:3723371 | Blo16g00243 | Blo-Chr16:5643367 | 2.52E-164 | dispersed | |
Blo17g00352 | Blo-Chr17:3723371 | Blo16g01131 | Blo-Chr16:39837804 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo17g00352 | K01728 | - | qsu:112023367 | 696.427 |