Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo17g00353 | ATGGAAATGGCAATACTGAAAAATGAAGGGAACCTGGGGAAAAGGCACCAATTTTGGTCGCCGGAAAATGAGGCTGATTCTCTGAGATGTGTCAAAAGAAGGCGAAGAAGCCGAGCGGCTAGTGCAGCTCCGGTTGGTTGTGATGAGGGCCAGAATCAAAGTCAGAGTCAGAAGCAGCAAGTTGATCAAATTCCTGCTGCCACCACAACAAAGAGAAGTTCAAGATTTCGAGGAGTAAGCAGGCATAGATGGACTGGTCGATACGAAGCTCATTTGTGGGATAAGCAGTCATGGAATATTACACAGAAAAAGAAGGGGAAACAAGGAGCTTATGATGACGAAGAATCTGCAGCAAGGGCATATGATTTAGCAGCACTGAAATACTGGGGGACATCGACTTTCACCAATTTTCCTGTATCGGAGTATGAAAAAGAGGTAGAAATTATGCAGCCATTGACAAAAGAGGAGTATCTTGCCTCTCTAAGAAGGAAGAGCAGTGGATTCTCGAGAGGCGTATCCAAGTACAGGGGAGTTGCAAGGCATCATCATAATGGTAGATGGGAAGCTAGAATAGGAAGAGTTTTTGGAAATAAATATCTCTATCTTGGCACTTACAGTACCCAAGAGGAAGCTGCTCGTGCGTACGACATAGCAGCGATTGAGTACAGAGGAATCAATGCCATCACAAATTTCGACCTGAGTTCATATATGAGATGGCTAAAGCCAGAATCAGATTGTGAAAATGCAGAATATGATGCACAAAGAGCCCCTGAGCCTGAAAACGGGCCAAATTATCAGCAATCACTAGAATTTCCCTCCTTCAGCAATGATTATTTTGACTCTGTCTACTTCAACTCTAATCAAAAGCCAGATATTTGCCAAGGCTCGCTCAATAAGTCTTCTTCCCCCACTGCACTTAGTATCCTCCTCAGATCTTCCATGTTCAGAGATTTGGTTGAGAAGAACTTACATGTCTCTGATGACGAAGCCAGCGAAGAAGAGCAGAAGATTCAGGCAAGTGAGGAAGATGAGTGTGAAAGAATAATAGCAGAACTTTTCATGGCATGA | 1068 | 43.63 | MEMAILKNEGNLGKRHQFWSPENEADSLRCVKRRRRSRAASAAPVGCDEGQNQSQSQKQQVDQIPAATTTKRSSRFRGVSRHRWTGRYEAHLWDKQSWNITQKKKGKQGAYDDEESAARAYDLAALKYWGTSTFTNFPVSEYEKEVEIMQPLTKEEYLASLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAITNFDLSSYMRWLKPESDCENAEYDAQRAPEPENGPNYQQSLEFPSFSNDYFDSVYFNSNQKPDICQGSLNKSSSPTALSILLRSSMFRDLVEKNLHVSDDEASEEEQKIQASEEDECERIIAELFMA | 355 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 3726507 | 3728252 | + | BLOR16174 | Blo17g00353 | 72741 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo17g00353 | 355 | Gene3D | AP2/ERF domain | 173 | 234 | IPR036955 | GO:0003700|GO:0006355 | |
Blo17g00353 | 355 | Gene3D | AP2/ERF domain | 74 | 140 | IPR036955 | GO:0003700|GO:0006355 | |
Blo17g00353 | 355 | Pfam | AP2 domain | 173 | 224 | IPR001471 | GO:0003700|GO:0006355 | |
Blo17g00353 | 355 | Pfam | AP2 domain | 74 | 130 | IPR001471 | GO:0003700|GO:0006355 | |
Blo17g00353 | 355 | MobiDBLite | consensus disorder prediction | 40 | 78 | - | - | |
Blo17g00353 | 355 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 20 | 348 | - | - | |
Blo17g00353 | 355 | SUPERFAMILY | DNA-binding domain | 173 | 234 | IPR016177 | GO:0003677 | |
Blo17g00353 | 355 | SMART | rav1_2 | 75 | 144 | IPR001471 | GO:0003700|GO:0006355 | |
Blo17g00353 | 355 | SMART | rav1_2 | 174 | 238 | IPR001471 | GO:0003700|GO:0006355 | |
Blo17g00353 | 355 | CDD | AP2 | 74 | 140 | IPR001471 | GO:0003700|GO:0006355 | |
Blo17g00353 | 355 | ProSiteProfiles | AP2/ERF domain profile. | 75 | 138 | IPR001471 | GO:0003700|GO:0006355 | |
Blo17g00353 | 355 | CDD | AP2 | 173 | 234 | IPR001471 | GO:0003700|GO:0006355 | |
Blo17g00353 | 355 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 20 | 348 | - | - | |
Blo17g00353 | 355 | ProSiteProfiles | AP2/ERF domain profile. | 174 | 232 | IPR001471 | GO:0003700|GO:0006355 | |
Blo17g00353 | 355 | PRINTS | Ethylene responsive element binding protein signature | 76 | 87 | IPR001471 | GO:0003700|GO:0006355 | |
Blo17g00353 | 355 | PRINTS | Ethylene responsive element binding protein signature | 214 | 234 | IPR001471 | GO:0003700|GO:0006355 | |
Blo17g00353 | 355 | SUPERFAMILY | DNA-binding domain | 74 | 140 | IPR016177 | GO:0003677 | |
Blo17g00353 | 355 | MobiDBLite | consensus disorder prediction | 47 | 74 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo09g00397 | Blo-Chr9:14885364 | Blo17g00353 | Blo-Chr17:3726507 | 4.22E-56 | dispersed | |
Blo13g00664 | Blo-Chr13:29354800 | Blo17g00353 | Blo-Chr17:3726507 | 1.01E-86 | dispersed | |
Blo14g00610 | Blo-Chr14:10677634 | Blo17g00353 | Blo-Chr17:3726507 | 9.01E-98 | dispersed | |
Blo17g00353 | Blo-Chr17:3726507 | Blo11g00401 | Blo-Chr11:3476505 | 1.02E-06 | dispersed | |
Blo17g00353 | Blo-Chr17:3726507 | Blo01g00418 | Blo-Chr1:4714030 | 1.16E-120 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13512 | PF00847 | AP2 | 7.80E-09 | CL0081 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo17g00353 | - | - | tcc:18601455 | 434.106 |