Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00353 ATGGAAATGGCAATACTGAAAAATGAAGGGAACCTGGGGAAAAGGCACCAATTTTGGTCGCCGGAAAATGAGGCTGATTCTCTGAGATGTGTCAAAAGAAGGCGAAGAAGCCGAGCGGCTAGTGCAGCTCCGGTTGGTTGTGATGAGGGCCAGAATCAAAGTCAGAGTCAGAAGCAGCAAGTTGATCAAATTCCTGCTGCCACCACAACAAAGAGAAGTTCAAGATTTCGAGGAGTAAGCAGGCATAGATGGACTGGTCGATACGAAGCTCATTTGTGGGATAAGCAGTCATGGAATATTACACAGAAAAAGAAGGGGAAACAAGGAGCTTATGATGACGAAGAATCTGCAGCAAGGGCATATGATTTAGCAGCACTGAAATACTGGGGGACATCGACTTTCACCAATTTTCCTGTATCGGAGTATGAAAAAGAGGTAGAAATTATGCAGCCATTGACAAAAGAGGAGTATCTTGCCTCTCTAAGAAGGAAGAGCAGTGGATTCTCGAGAGGCGTATCCAAGTACAGGGGAGTTGCAAGGCATCATCATAATGGTAGATGGGAAGCTAGAATAGGAAGAGTTTTTGGAAATAAATATCTCTATCTTGGCACTTACAGTACCCAAGAGGAAGCTGCTCGTGCGTACGACATAGCAGCGATTGAGTACAGAGGAATCAATGCCATCACAAATTTCGACCTGAGTTCATATATGAGATGGCTAAAGCCAGAATCAGATTGTGAAAATGCAGAATATGATGCACAAAGAGCCCCTGAGCCTGAAAACGGGCCAAATTATCAGCAATCACTAGAATTTCCCTCCTTCAGCAATGATTATTTTGACTCTGTCTACTTCAACTCTAATCAAAAGCCAGATATTTGCCAAGGCTCGCTCAATAAGTCTTCTTCCCCCACTGCACTTAGTATCCTCCTCAGATCTTCCATGTTCAGAGATTTGGTTGAGAAGAACTTACATGTCTCTGATGACGAAGCCAGCGAAGAAGAGCAGAAGATTCAGGCAAGTGAGGAAGATGAGTGTGAAAGAATAATAGCAGAACTTTTCATGGCATGA 1068 43.63 MEMAILKNEGNLGKRHQFWSPENEADSLRCVKRRRRSRAASAAPVGCDEGQNQSQSQKQQVDQIPAATTTKRSSRFRGVSRHRWTGRYEAHLWDKQSWNITQKKKGKQGAYDDEESAARAYDLAALKYWGTSTFTNFPVSEYEKEVEIMQPLTKEEYLASLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAITNFDLSSYMRWLKPESDCENAEYDAQRAPEPENGPNYQQSLEFPSFSNDYFDSVYFNSNQKPDICQGSLNKSSSPTALSILLRSSMFRDLVEKNLHVSDDEASEEEQKIQASEEDECERIIAELFMA 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 3726507 3728252 + BLOR16174 Blo17g00353 72741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00353 355 Gene3D AP2/ERF domain 173 234 IPR036955 GO:0003700|GO:0006355
Blo17g00353 355 Gene3D AP2/ERF domain 74 140 IPR036955 GO:0003700|GO:0006355
Blo17g00353 355 Pfam AP2 domain 173 224 IPR001471 GO:0003700|GO:0006355
Blo17g00353 355 Pfam AP2 domain 74 130 IPR001471 GO:0003700|GO:0006355
Blo17g00353 355 MobiDBLite consensus disorder prediction 40 78 - -
Blo17g00353 355 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 20 348 - -
Blo17g00353 355 SUPERFAMILY DNA-binding domain 173 234 IPR016177 GO:0003677
Blo17g00353 355 SMART rav1_2 75 144 IPR001471 GO:0003700|GO:0006355
Blo17g00353 355 SMART rav1_2 174 238 IPR001471 GO:0003700|GO:0006355
Blo17g00353 355 CDD AP2 74 140 IPR001471 GO:0003700|GO:0006355
Blo17g00353 355 ProSiteProfiles AP2/ERF domain profile. 75 138 IPR001471 GO:0003700|GO:0006355
Blo17g00353 355 CDD AP2 173 234 IPR001471 GO:0003700|GO:0006355
Blo17g00353 355 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 20 348 - -
Blo17g00353 355 ProSiteProfiles AP2/ERF domain profile. 174 232 IPR001471 GO:0003700|GO:0006355
Blo17g00353 355 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Blo17g00353 355 PRINTS Ethylene responsive element binding protein signature 214 234 IPR001471 GO:0003700|GO:0006355
Blo17g00353 355 SUPERFAMILY DNA-binding domain 74 140 IPR016177 GO:0003677
Blo17g00353 355 MobiDBLite consensus disorder prediction 47 74 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00397 Blo-Chr9:14885364 Blo17g00353 Blo-Chr17:3726507 4.22E-56 dispersed
Blo13g00664 Blo-Chr13:29354800 Blo17g00353 Blo-Chr17:3726507 1.01E-86 dispersed
Blo14g00610 Blo-Chr14:10677634 Blo17g00353 Blo-Chr17:3726507 9.01E-98 dispersed
Blo17g00353 Blo-Chr17:3726507 Blo11g00401 Blo-Chr11:3476505 1.02E-06 dispersed
Blo17g00353 Blo-Chr17:3726507 Blo01g00418 Blo-Chr1:4714030 1.16E-120 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13512 PF00847 AP2 7.80E-09 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00353 - - tcc:18601455 434.106