Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00357 ATGGCAGAAACAGTAGAAGCTAAAGCTAAAGCGTTGCCTGAGACTGAGAAGAAGAAGGAGCAGACTCTACCCTTTTACCAGCTCTTCTCTTTTGCTGACAAATATGACTGCTTCCTCATGATCCTTGGGAGCGTGGGAGCCATTATTCATGGCGCTTCCATGCCAGTTTTCTTCCTCTTGTTTGGTGAAATGGTTAACGGGTTTGGAAAAAATCAGATGGATTTGAAGAAAATGACCGAAGAAGTCTCCAAGTACGCACTTTATTTTGTGTATTTCGGCATCGTTGTGTGCTTCTCATCTTACGCAGAAATCGGATGCTGGATGTATACCGGGGAGAGACAGGCGATCACTCTGAGAAAGAAGTATTTGGAGGCGGTTTTGAAGCAAGACGTCGGATTCTTCGACACGGATGCACGAACAGGGGATGTTGTTTTCAGTGTTTCAACGGACACTCTTTTAGTCCAAGACGCCATTAGTGAGAAGGCCATAGCGCAGGTTAGGACAGTCTATTCGTATGTTGGGGAGAGCAAGGCCCTGAATTCTTATTCTGATGCGATACAGAATACATTGAAGCTTGGATATAAAGCAGGAATGGCGAAAGGGTTGGGTTTAGGATGTACTTACGGAATTGCTTGTATGTCTTGGGCTCTTGTTTTCTGGTACGCCGGAGTTTTTATCCGAAACGGCCAGACCGACGGTGGGAAAGCATTTACTGCAATTTTTTCGGCCATCGTGGGTGGAATGAGTTTGGGTCAGTCATTTTCAAATCTGGGTGCATTTAGCAAAGGCAAAGCTGCCGGATACAAGTTAATGGAGATTATCAACCAAAAACCTTCTATAAATCAAGATCCTTTGGAAGGAAAATGCTTGGCCGAAGTTAATGGCAATATTGAGTTTAAGAATGTTACTTTCAGTTACCCGTCGAGGCCGGATGTTGTTATTTTCCGGGACTTTTCTATATTCTTTGCTGCCGGAAAAACTGTTGCCGTTGTAGGTGGCAGCGGATCTGGAAAAAGCACTGTTGTTTCTCTAATCGAAAGATTTTATGATCCCAATCAGGGTGAGGTTTTATTGGATAATAATGATATAAAAACACTGCAGCTGAAATGGCTACGGGATCAGATAGGACTAGTGAACCAAGAGCCTGCCCTCTTCGCAACGACTATACTTGAAAATATACTCCACGGGAAGCCTGATGCAACCATGGCTGAAGTTGAGGCTGCTGCTTCTGCCGCAAATGCTCATAGCTTCATCAACCTTCTTCCTAATGGCTACAATACTCATGTAGGAGACCGGGGGGTCCAACTTTCCGGTGGCCAAAAACAGAGAATCGCCATAGCCAGGGCAATGCTGAAAGATCCTAAGATCCTTCTTCTCGACGAGGCGACAAGTGCCCTCGATGCAGGCTCTGAGAGCATTGTTCAAGAGGCTTTAGATCGATTAACAGTGGGAAGAACAACAGTGGTGGTAGCTCATCGTCTTTCGACGATAAGAAATGTCGACACAATTGCAGTAATTCAACAGGGGCAAGTAGTCGAATCTGGGACTCACGAAGAACTCATTTCGAAAGCAGGGGCCTACGCCTCACTAATCCGATTCCAAGAAATCGTTAAAAACAAAGATTTTTCAAATCCGTCAACCCGCCGATCACGATCATCTCGGCTAAGCCACTCGTTGTCGACAAAGTCGTTGAGCCTCCGGTCTGGCAGTCTGAGGAATTTGAGCTATTCCTACAGTACCGGAGCCGATGGGAGGATAGAGATGGTGTCAAATGCTGAATCTGATAAGAGAAATCCAGCCCCAGCTGATTACTTTTTCCGGCTTCTGAAATTGAACGCACCCGAATGGCCATACTCAATCATGGGTGCCATAGGATCTGTTCTTTCAGGATTCATCGGTCCAACATTTGCGATAGTGATGAGCTACATGATCGAGGTGTTTTACTACAGAAATGGAGCTGCCATGGAGAAAAAATCGAAGGAATACGTCTTCATTTACATTGGAGTTGGTGTTTATGCTGTGTTTGCATACCTTATTCAGCATTATTTCTTTAGCATTATGGGAGAGAATCTCACTACCAGAGTGAGAAGAATGATGCTAGCAGCGATTTTAAGGAATGAAGTAGGATGGTTCGACGAAGAGGAGCATAATTCAAGCTTATTAGCTGCCCGCTTAGCCACAGATGCAGCTGATGTGAAATCCGCCATTGCAGAGAGAATCTCTGTGATTTTGCAGAACATGACGTCACTTCTGACTTCCTTTATTGTAGCCTTCATTATCGAGTGGAGGGTCTCCCTTCTCATCCTCGCGACCTTCCCTCTCCTAGTCCTCGCCAACTTTGCCCAGCAACTGTCTCTCAAGGGTTTTGCTGGAGACACGGCCAAAGCCCATGCAAAGACGAGCATGATTGCCGGAGAGGGAGTGAGCAATATCAGAACAGTGGCAGCCTTCAATTCTCAGGCTAAGATTCTCTCCCTCTTCAGCCATCAGCTACGTGTTCCTCTCCGCCGGAGCTTCCGCCGGAGCCAAACTGCCGGCCTTCTCTTTGGTCTTTCTCAGCTTGCCCTTTACGCCTCCGAAGCCCTAGTTCTCTGGTATGGCGTTCACCTTGTCAAGAGAGGAATCTCGTCTTTCTCACAAGTCATCAAAGTTTTTGTTGTCCTAGTCGTCACTGCAAATTCCGTAGCGGAAACTGTCAGTCTAGCTCCGGAAATCATCAGGGGTGGCGAAGCAGTGGGTTCTGTCTTCTCAATTCTCGATCGGTCCACCAAGATTTACCCGGACGATCCAGAAGGGGACATGGTCGAATCGATCCGCGGCGAAATTGAGCTTCGTCATGTCGATTTCGCCTACCCATCCCGCCCTGATATCATAGTTTTCAAAGACCTCAATTTGAGAATCCGATCAGGGCAGAGCCAAGCGCTTGTTGGGGCCAGTGGCTCAGGAAAAAGCTCTGTCATTGCATTGATAGAGAGGTTCTACGATCCGATCGCTGGAAAAGTTATGATCGATGGGAAGGACATCAGGCGGATGAACTTGAAGTCTCTCCGGCTCAAAATCGGGCTCGTTCAACAAGAGCCGGTTCTCTTCGCCGCCACCATTTTTGACAACATTGCTTACGGGAAAGACGGTGCTACCGAAACAGAAGTGATCGAAGCAGCCCGATTAGCCAACGTGCACGGATTTGTCAGTGGGTTGCCAGAGGGTTACAAGACTCCAGTGGGCGAGAGAGGAGTTCAGCTCTCTGGCGGACAGAAGCAAAGAATTGCAATAGCCAGAGCTGTTTTAAAAGATCCTGCCATTCTTCTGCTCGACGAGGCCACAAGCGCTCTCGACGCAGAGTCAGAATGTGTCCTCCAAGAAGCCCTCGAACGGCTAATGAGGGGGCGAACAACAGTGCTGGTGGCTCATCGATTGTCCACCATTCGAGGTGTGGATTGCATTGGAGTGGTGCAAGATGGACGGATTGTAGAGCAAGGCAGCCATTCCGAGCTCGTCAGCCGACCTGAGGGGGCTTACTCAAGGCTATTACAGCTTCAACACCATCACATATGA 3555 47.57 MAETVEAKAKALPETEKKKEQTLPFYQLFSFADKYDCFLMILGSVGAIIHGASMPVFFLLFGEMVNGFGKNQMDLKKMTEEVSKYALYFVYFGIVVCFSSYAEIGCWMYTGERQAITLRKKYLEAVLKQDVGFFDTDARTGDVVFSVSTDTLLVQDAISEKAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIINQKPSINQDPLEGKCLAEVNGNIEFKNVTFSYPSRPDVVIFRDFSIFFAAGKTVAVVGGSGSGKSTVVSLIERFYDPNQGEVLLDNNDIKTLQLKWLRDQIGLVNQEPALFATTILENILHGKPDATMAEVEAAASAANAHSFINLLPNGYNTHVGDRGVQLSGGQKQRIAIARAMLKDPKILLLDEATSALDAGSESIVQEALDRLTVGRTTVVVAHRLSTIRNVDTIAVIQQGQVVESGTHEELISKAGAYASLIRFQEIVKNKDFSNPSTRRSRSSRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMVSNAESDKRNPAPADYFFRLLKLNAPEWPYSIMGAIGSVLSGFIGPTFAIVMSYMIEVFYYRNGAAMEKKSKEYVFIYIGVGVYAVFAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLLAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIIEWRVSLLILATFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNSQAKILSLFSHQLRVPLRRSFRRSQTAGLLFGLSQLALYASEALVLWYGVHLVKRGISSFSQVIKVFVVLVVTANSVAETVSLAPEIIRGGEAVGSVFSILDRSTKIYPDDPEGDMVESIRGEIELRHVDFAYPSRPDIIVFKDLNLRIRSGQSQALVGASGSGKSSVIALIERFYDPIAGKVMIDGKDIRRMNLKSLRLKIGLVQQEPVLFAATIFDNIAYGKDGATETEVIEAARLANVHGFVSGLPEGYKTPVGERGVQLSGGQKQRIAIARAVLKDPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHSELVSRPEGAYSRLLQLQHHHI 1184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 3797075 3802997 - BLOR16178 Blo17g00357 72745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00357 1184 ProSitePatterns ABC transporters family signature. 436 450 IPR017871 GO:0005524
Blo17g00357 1184 Gene3D ABC transporter type 1, transmembrane domain 912 939 IPR036640 GO:0005524|GO:0016021
Blo17g00357 1184 Gene3D ABC transporter type 1, transmembrane domain 160 911 IPR036640 GO:0005524|GO:0016021
Blo17g00357 1184 SUPERFAMILY ABC transporter transmembrane region 607 921 IPR036640 GO:0005524|GO:0016021
Blo17g00357 1184 PANTHER ABC TRANSPORTER TAP-LIKE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 15 161 - -
Blo17g00357 1184 Pfam ABC transporter 317 464 IPR003439 GO:0005524
Blo17g00357 1184 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 15 161 IPR039421 -
Blo17g00357 1184 Pfam ABC transporter transmembrane region 40 162 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo17g00357 1184 Pfam ABC transporter transmembrane region 620 891 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo17g00357 1184 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 297 533 IPR003439 GO:0005524
Blo17g00357 1184 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 290 534 IPR027417 -
Blo17g00357 1184 CDD ABC_MTABC3_MDL1_MDL2 942 1180 - -
Blo17g00357 1184 SUPERFAMILY ABC transporter transmembrane region 28 278 IPR036640 GO:0005524|GO:0016021
Blo17g00357 1184 Pfam ABC transporter 961 1109 IPR003439 GO:0005524
Blo17g00357 1184 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 944 1178 IPR003439 GO:0005524
Blo17g00357 1184 CDD ABC_6TM_Pgp_ABCB1_D2_like 609 925 - -
Blo17g00357 1184 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 163 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo17g00357 1184 SMART AAA_5 969 1155 IPR003593 -
Blo17g00357 1184 SMART AAA_5 324 510 IPR003593 -
Blo17g00357 1184 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 934 1180 IPR027417 -
Blo17g00357 1184 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 620 907 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo17g00357 1184 Gene3D - 295 554 IPR027417 -
Blo17g00357 1184 Gene3D - 940 1181 IPR027417 -
Blo17g00357 1184 Gene3D ABC transporter type 1, transmembrane domain 18 159 IPR036640 GO:0005524|GO:0016021
Blo17g00357 1184 CDD ABC_MTABC3_MDL1_MDL2 297 534 - -
Blo17g00357 1184 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 166 262 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo17g00357 1184 PANTHER ABC TRANSPORTER TAP-LIKE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 158 1182 - -
Blo17g00357 1184 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 158 1182 IPR039421 -
Blo17g00357 1184 CDD ABC_6TM_Pgp_ABCB1_D1_like 40 270 - -
Blo17g00357 1184 ProSitePatterns ABC transporters family signature. 1081 1095 IPR017871 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00357 Blo-Chr17:3797075 Blo18g00361 Blo-Chr18:3808264 5.59E-20 dispersed
Blo17g00357 Blo-Chr17:3797075 Blo07g01389 Blo-Chr7:33963366 2.69E-46 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00357 K05658 - zju:107415585 1756.88