Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo17g00363 | ATGGAAGTAGCTCCGCCTCCGATTGCCGCCATTAGTAGCGGTACTAAATCTCCTGAAGCTGATTCTGAAACCCCGACGAAGATCCAACAGACCGGAAAGCTCTCCCCTTTCAGTAATGGCGTCCTCAAGCGTCACAGTTATGCGGCTTCTCAGCCTGTAATAGTTTCTTCTGTTTCTTACAAAGAATGTCTGAAAAATCACGCTGCTAGCATCGGTTCTCACGCTTTGGATGGGTGTGGAGAGTTTATGCCCTCTCCTTCCGCCGCTTCAAATGACCCTTTTTCTCTCAAATGCGCCGCCTGCGGTTGTCACCGGAACTTCCACCGCCGTGAGCCGGAAGATCAGCCACTTTCCGCTGCCATTTCCACACATGTCATCGAATATCAGCCTCACCACCGCCATCACCCGCCTCCTCCTCTACACCCGCCCTCCAACCGCAGCCCGAATTCTTCCTCGCCACCTCCAATCTCCTCCTCTTACTACCCCTCAGCCCCCCACATGCTTCTCGCTCTGTCGGCCGGACTGTCAGCTCCTCCCGAAAATGCGCCTGCAATTGTCTCTCCGACCACCGCGAGAAAAAGATTCAGAACAAAATTCAGCCTAGATCAGAAAGAGAAGATGCACGAGTTTGCAGAAAAACTGGGGTGGAAATTTCAGAAGAGAGACGAAGAACTTGTTCGAGAATTCTGCAGTGAAGTCAGAGTAGAAAAAGGAGTTCTCAAAGTCTGGATGCATAACAACAAGAACACTCTTGCTAAGAAGGACGTCAATGGCGAAAAGCCCATCCAGCAAAATTCCCAGAACAACGGCAACGACAACTACGAGGAAAACGCCATTAATCAGCACCACTCCATGGTTCAGAATCCGAATCACTATCACAACGATGTAAGGCTACATTTTGGCACTAATGGGTCGTCTTCTTCCTCTTGA | 930 | 50.22 | MEVAPPPIAAISSGTKSPEADSETPTKIQQTGKLSPFSNGVLKRHSYAASQPVIVSSVSYKECLKNHAASIGSHALDGCGEFMPSPSAASNDPFSLKCAACGCHRNFHRREPEDQPLSAAISTHVIEYQPHHRHHPPPPLHPPSNRSPNSSSPPPISSSYYPSAPHMLLALSAGLSAPPENAPAIVSPTTARKRFRTKFSLDQKEKMHEFAEKLGWKFQKRDEELVREFCSEVRVEKGVLKVWMHNNKNTLAKKDVNGEKPIQQNSQNNGNDNYEENAINQHHSMVQNPNHYHNDVRLHFGTNGSSSSS | 309 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 17 | 3880322 | 3881251 | - | BLOR16184 | Blo17g00363 | 72751 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo17g00363 | 309 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
| Blo17g00363 | 309 | MobiDBLite | consensus disorder prediction | 15 | 35 | - | - | |
| Blo17g00363 | 309 | PANTHER | HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN | 10 | 271 | - | - | |
| Blo17g00363 | 309 | Gene3D | - | 183 | 254 | - | - | |
| Blo17g00363 | 309 | MobiDBLite | consensus disorder prediction | 259 | 275 | - | - | |
| Blo17g00363 | 309 | MobiDBLite | consensus disorder prediction | 129 | 159 | - | - | |
| Blo17g00363 | 309 | TIGRFAM | homeo_ZF_HD: homeobox domain, ZF-HD class | 192 | 249 | IPR006455 | - | |
| Blo17g00363 | 309 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 10 | 271 | - | - | |
| Blo17g00363 | 309 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 60 | 111 | IPR006456 | - | |
| Blo17g00363 | 309 | MobiDBLite | consensus disorder prediction | 255 | 275 | - | - | |
| Blo17g00363 | 309 | Pfam | ZF-HD protein dimerisation region | 58 | 112 | IPR006456 | - | |
| Blo17g00363 | 309 | SUPERFAMILY | Homeodomain-like | 185 | 253 | IPR009057 | - | |
| Blo17g00363 | 309 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 60 | 111 | IPR006456 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo10g00133 | Blo-Chr10:1513887 | Blo17g00363 | Blo-Chr17:3880322 | 7.07E-95 | dispersed | |
| Blo17g00363 | Blo-Chr17:3880322 | Blo18g00811 | Blo-Chr18:23935729 | 1.66E-42 | dispersed | |
| Blo11g00585 | Blo-Chr11:5715242 | Blo17g00363 | Blo-Chr17:3880322 | 6.41E-93 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 13514 | PF04770 | ZF-HD_dimer | 1.60E-28 | No_clan | Blo | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo17g00363 | - | - | jre:108985975 | 332.028 |