Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00377 ATGGCGACTCCGAGGCCGAAGAGATCAACGGCGGAGGTGGAGGATATCATTCTGAGGAAAATTTTTCTTGTTTCTTTTACGGATACCGGCAGTTCCGATTCCCAAATCGTCTACCTTGAGCAGACTGCAGCTGAGGTCTTGAGCGAGGGGAAAGATTTGAGACTCTCCAGGGATTTGATGGAAAGAATCATAATCGATCGACTTTCTTGTAATTTTCTTTCTGCGGAACCGCCTTTCCAATATCTAATTGGGTGCTATCGCCGTGCTTATGACGAGGGGAAGAAAATCGTGTCCATGAAGGATAAGAATTTGAGGTCTGAGATGGAATTAGTTGTGAAAGAAGCAAAAAAGTTATCTGTTTCTTATTGTAGGATACATTTGGGGAATCCGGGATTTTTTACTGATGGAAAATCAGAAGCAGACACTAAGAATGTTTCACCTCTGTTGCCTTTGGTTTTCTCTGAGGTTGGGGGTTCAGTTGATGGAGTTGGAGGCAGTAACAGCAGTGGAGGATTTCAGAGCCCACCAGGTTTTTTGGAGGAGTTTTTCCGAGATTCTGATTTGGATAGCTTGGACCCTATTTTGAAGGTGCTTTTTGAAAATTTGAGAGGCACTGTGATAAAGGTTTCAGCTTTAGGGAACTTCCAGCAGCCTTTGAGGGCATTGTTGTTTTTACTTAGTTTTCCACTTGCTGCTAAGTCTTTAGTGAAGCATCCATGGTGGATACCGGATAATAAGTATCTGAATGGGCGTGTTATTGAGATGACAAGCATTTTGGGGCCTTTTTTTCATGTTAGCGCATTGCCTGACGTTGAGATTTTTAAGAGTGAACCTAATGTTGGGCAACAATGCTTTTCTGAAGTATCAACTCAACGGCCATCTGATTTATTAGCTTCATTTACGACAATCAAAACAGTCATGAATAACTTGTATGATGGCCTAACTGAAGTTCTTCTCTCTCTTCTTAAGAATACAGACACTCGGGAAAATATTCTTGAGTATCTTGGGGTGGTGATAAATAAAAACTCGTCGAGGGCTCAAATGCAGGTGGAGCTTCTCTCTTCTGCTAGTTCAGGGATGTTTGTCAATCTCAGTGTTGTTATGCTTAGGCTATGTGAGCCATTTTTGGATGCAAATATGACAAAACGGGATAAAATTGATCCAAATTATGTATTCTATGGTAACCGTTTAGAATTAAGAGGGTTGACTGCTCTACATGCATCGGTGGAAGAAGTTTTTGAGTGGATTAATGAAGATAATAATGGGAAAACTGATAGTTCTGGACAATATAGTGATGGTGAAAATCGCTTGCTTCAATCTAAAGAAGCCTCTGTTTCTGGTAATGATGTGTCTGCAGCATATAAAGGAAAGCAGACAATTAATGAAAAAAGAAAGTTCCCATTCATATGTGAATGCTTCTTTATGACTGCAAGGGTACTCAACTTAGGCTTGTTAAAAGCCTTGTCAGACTTCAAACATTTAACGCAGGATAAATCCAGATCTGAAGATATGCTTTCTACTCTTAAAGACAGGCGGGGTTCAACCACTTCTCAGCAGCTTGAATTGGAAATAGCTCGTCTTGAGAAGGAAATTGAGGTTTATTCACAGGAAAAGCTTTGCTATGAAGCGCAGATAGTAAGGGATGGAACTCTGATTCAGCAGGCTCTTTCTTTCTACCGACTAGTGGTTGTTTGGTTAGTTGGCTTGGTTGGAGGATTCAAAATGCCCCTCTCGCCAATTGCTCCAATGGAATTTGCTTCTTTGCCCGAACATTTTGTGGACGATGCAATGGAATTGCTTATATTCGCTTCTTGGATTCCTAAAGCTTTGGATGGCGCCTTGTTGGATGAATTTATGAATTTCATCATCATGTTCATGGCAAGTCCGGACTACATCCGAAATCCTTATCTGAGAGCAAAGATGGTTCAAGTCCTTAACTCCTGGATACCTCGTGGAAGTGGCCCGGCTGTTACAAATACGTTATTAGATGGACATCAACTGTCTCTTGAGTATCTCGTGAGAAATCTTTTGAAGCTTTATGTTGACATTGAGCTCACTGGTACTCACAACCAGTTCTTTGAGAAGTTCAACATCCGCCACGATATTGCCGAACTTCTTGAATACCTCTGGCAGGTCCCTAATCATCGTAGTGCTTGGAGACAGACGAAGGAAATGAGTGGAAATACACGTGCGTTGCTAGCTAATGCCTTTTACATTGATCTTATTGCAAAGGAGGAGGAAAAGGGTGTTTATCTGAATTTCCTAAACTTCCTAATCAATGATAGCATATATCTTCTCGATGAGAGCCTTAATAAAATTCTTGAAATCAAAGTGCTGGAAGCGGAGATGTCAAACACTGTGGAATGGGAACAACGACCTGCTGAAGAAAGACTAGAGAGAACTCGGTTGTTCCAAAGCCAAGAAAATATTGTTCGAGTTAATATGAAATTGGCAAATGAGGATGTTGGTCTACTTTCATTTACCTCAGAGCAGATTACAGCCCCTTTTCTACTTCCTGAGATGATTGAAAGAGTGGCAAGCATGCTCAATTATTTTCTCCTACAACTTGTTGGTCCTCAACGTAGATCTCTTAGTCTGAAGGACCCTGAGAAGTATGAATTCCGTCCAAAGCAGCTGCTTAAGCAGATTGTGCAAATATATGTCCATCTGGCAAGGGGTGATTCAAATAATGTTTTCCCGGCTGCAATCTCCAAGGATGGTCGATCTTATAACCACCAATTGTTCACTGCTGCAGCAGTGGTCCTTCGAAGAATAGGAGAAGATATGAGGATCATTCAGGAGTTTATTGAGCTTGGTAACAAAGCTAAAATTGCAGCATCTGAGGCTTTAGACGTCGAAGCTGCTCTTGGGGAAATACCTGATGAATACCTTGACCCAATTCAATATACTTTAATGAAGGATCCAGTGATCCTACCTTCTTCAAGGATCACAGTCGACCGGCCGGTGATTCAGAGGCACCTACTAAGTGATAGTACTGACCCATTCAATCGTTCGCATCTCACGGCCGACATGCTCATACCGGACGCGGAATTGAAAGTGAAAATTGAGGAGTTCATTCGGTCCCAACAAATGAAGAAGCAATCAGAAGGGGTAAACGAGCAAAGCACTAAAGGATCAATACAAAATACAAGTAGCGCAATGGTAATCGACTGA 3174 41.59 MATPRPKRSTAEVEDIILRKIFLVSFTDTGSSDSQIVYLEQTAAEVLSEGKDLRLSRDLMERIIIDRLSCNFLSAEPPFQYLIGCYRRAYDEGKKIVSMKDKNLRSEMELVVKEAKKLSVSYCRIHLGNPGFFTDGKSEADTKNVSPLLPLVFSEVGGSVDGVGGSNSSGGFQSPPGFLEEFFRDSDLDSLDPILKVLFENLRGTVIKVSALGNFQQPLRALLFLLSFPLAAKSLVKHPWWIPDNKYLNGRVIEMTSILGPFFHVSALPDVEIFKSEPNVGQQCFSEVSTQRPSDLLASFTTIKTVMNNLYDGLTEVLLSLLKNTDTRENILEYLGVVINKNSSRAQMQVELLSSASSGMFVNLSVVMLRLCEPFLDANMTKRDKIDPNYVFYGNRLELRGLTALHASVEEVFEWINEDNNGKTDSSGQYSDGENRLLQSKEASVSGNDVSAAYKGKQTINEKRKFPFICECFFMTARVLNLGLLKALSDFKHLTQDKSRSEDMLSTLKDRRGSTTSQQLELEIARLEKEIEVYSQEKLCYEAQIVRDGTLIQQALSFYRLVVVWLVGLVGGFKMPLSPIAPMEFASLPEHFVDDAMELLIFASWIPKALDGALLDEFMNFIIMFMASPDYIRNPYLRAKMVQVLNSWIPRGSGPAVTNTLLDGHQLSLEYLVRNLLKLYVDIELTGTHNQFFEKFNIRHDIAELLEYLWQVPNHRSAWRQTKEMSGNTRALLANAFYIDLIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILEIKVLEAEMSNTVEWEQRPAEERLERTRLFQSQENIVRVNMKLANEDVGLLSFTSEQITAPFLLPEMIERVASMLNYFLLQLVGPQRRSLSLKDPEKYEFRPKQLLKQIVQIYVHLARGDSNNVFPAAISKDGRSYNHQLFTAAAVVLRRIGEDMRIIQEFIELGNKAKIAASEALDVEAALGEIPDEYLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTADMLIPDAELKVKIEEFIRSQQMKKQSEGVNEQSTKGSIQNTSSAMVID 1057
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 4183908 4190028 - BLOR16198 Blo17g00377 72765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00377 1057 Coils Coil 517 544 - -
Blo17g00377 1057 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 958 1038 IPR013083 -
Blo17g00377 1057 PANTHER - 1 1035 - -
Blo17g00377 1057 CDD RING-Ubox_UBE4A 961 1030 - -
Blo17g00377 1057 MobiDBLite consensus disorder prediction 1031 1057 - -
Blo17g00377 1057 PANTHER UBIQUITINATION FACTOR E4 1 1035 IPR045132 GO:0000151|GO:0030433|GO:0034450
Blo17g00377 1057 Pfam U-box domain 959 1030 IPR003613 GO:0004842|GO:0016567
Blo17g00377 1057 SUPERFAMILY RING/U-box 951 1030 - -
Blo17g00377 1057 SMART Ubox_2 962 1025 IPR003613 GO:0004842|GO:0016567
Blo17g00377 1057 Pfam Ubiquitin elongating factor core 259 942 IPR019474 GO:0000151|GO:0006511|GO:0016567|GO:0034450
Blo17g00377 1057 ProSiteProfiles U-box domain profile. 958 1032 IPR003613 GO:0004842|GO:0016567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00377 K10597 - csv:101211398 1560.04