Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo17g00378 | ATGAAACTGAAAAGGCAAGTGATTGAGATACAAGCACAGAAGCGTCAGGGGCAATCTCGTCCAGCAAAAATACACTCGTCTCCCACCCAGAGAAAGAAGCAGAGGGAGGAGAGCAGGCGACAACAGACAGCTAAGGCCTGGGCTTCAGCGAACGCAATCGATGCCACCAGAGAATTCACAAATAACAAGGGGCATGGGAAGGGGGAAAATCTAACTCTGCAACATCACCTGATAAATTATCTTTCCGAAAGCTTTTATCTTCGCCACTTGGTATCTAAGCAACGAAGAAGAATGCTTGTTGCCGGTTTTGATCTTGACATGTCCTATATCACAGATCGTATATTGGCAATGTCTTTCCCTGCAGAACGCATGCGTGCAGTTTATCGTAATCCTCTGTGGCAGGTTAAGTCTGTTCTTGACATGAGACATCGGGATCATTATAAGATATATAACCTATGCATAGAAGAATCATACGATCCATCTCATTTTCATGGCCGGGTAGAGGCATTTCCTTTTGATGACAACCATGTCCCACCTCTCCAAATGATTAAGCTTTTCTGCGAGAGTGTTCATTCATGGCTATCATGTAACCAAAAGAATGTTGCCGTGATACACTGCATGGCAGGCAAAGGTCGGACTGGCTTAATGGTATGTGCCTACCTTGTATACAGTGGCATGTCAGCGGAGGAGGCGCTGCAATTGTATGCCCATAGGCGGACCACCAATAATGAAGGGGTCTCGATTCCTAGCCAACGCCGTTACGTGGGCTACTGGGCAAGTTTACTTTCTTTTCCTAAGGGCGTTCTTCACGGACCTCCAGATGTAAAATTTTCAAAGGCTTGTAGTAGGGAACTGCGCCGAATTCGGCTTTATGACACAATTAATATTGAATCAGTCTTCTTTGTCATCACGGAGCTCCAAGAAGCTTCAAGTAAGCTGTACACTCCGTCGGTTGAAGTTACGCGGAGTTATTGCAGGCGAATAAAGAAAGGTTATCAGAGAAGCGGCAGCCATCAGTACTATCTCTCTTTTGTTGAAGATGATCAAAAAAGGAACATGACAGAAGAAGAAAAATTTCATAATGTAGTTCAAATGGACACGGAGATTCCAGTATTCTACGAAAAGTCTTGTCTTGACTACAATTTCAATAAACCTCTAACAGTAACTGGAGATGTGCGAGTCATATTCTATCAGAAAATGATTGGAGGGCGTTTTTTCTATGCCTGCTTCAACACATCCTTCATCAAGAACAGCTTGCTTCAGCTTACTGCTGGTGAGTTGGATAAAGTTGGGAGCAGAGGAAAATCAATATGCGGCCCTGCGTTTTGCTTGGAGCTCCTATTCGGACCGGCCAATGCTAAACACTCGTTTTCGACATGGTCCGACAATGATGATTCTTCCGACGAGGTGTTCTAA | 1416 | 44.42 | MKLKRQVIEIQAQKRQGQSRPAKIHSSPTQRKKQREESRRQQTAKAWASANAIDATREFTNNKGHGKGENLTLQHHLINYLSESFYLRHLVSKQRRRMLVAGFDLDMSYITDRILAMSFPAERMRAVYRNPLWQVKSVLDMRHRDHYKIYNLCIEESYDPSHFHGRVEAFPFDDNHVPPLQMIKLFCESVHSWLSCNQKNVAVIHCMAGKGRTGLMVCAYLVYSGMSAEEALQLYAHRRTTNNEGVSIPSQRRYVGYWASLLSFPKGVLHGPPDVKFSKACSRELRRIRLYDTINIESVFFVITELQEASSKLYTPSVEVTRSYCRRIKKGYQRSGSHQYYLSFVEDDQKRNMTEEEKFHNVVQMDTEIPVFYEKSCLDYNFNKPLTVTGDVRVIFYQKMIGGRFFYACFNTSFIKNSLLQLTAGELDKVGSRGKSICGPAFCLELLFGPANAKHSFSTWSDNDDSSDEVF | 471 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 17 | 4194493 | 4203241 | - | BLOR16199 | Blo17g00378 | 72766 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo17g00378 | 471 | PANTHER | BNAC03G16750D PROTEIN | 69 | 455 | - | - | |
| Blo17g00378 | 471 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 103 | 262 | IPR029021 | - | |
| Blo17g00378 | 471 | CDD | PTP_PTEN | 106 | 261 | IPR045101 | GO:0016791 | |
| Blo17g00378 | 471 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 204 | 214 | IPR016130 | GO:0016311|GO:0016791 | |
| Blo17g00378 | 471 | Gene3D | Protein tyrosine phosphatase superfamily | 83 | 264 | IPR029021 | - | |
| Blo17g00378 | 471 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 184 | 239 | IPR000387 | GO:0016311|GO:0016791 | |
| Blo17g00378 | 471 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 96 | 265 | IPR029023 | - | |
| Blo17g00378 | 471 | Pfam | C2 domain of PTEN tumour-suppressor protein | 365 | 448 | IPR014020 | - | |
| Blo17g00378 | 471 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 372 | 450 | IPR035892 | - | |
| Blo17g00378 | 471 | MobiDBLite | consensus disorder prediction | 11 | 25 | - | - | |
| Blo17g00378 | 471 | SMART | PTEN_C2_2 | 307 | 450 | IPR014020 | - | |
| Blo17g00378 | 471 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 69 | 455 | - | - | |
| Blo17g00378 | 471 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
| Blo17g00378 | 471 | Pfam | Tyrosine phosphatase family | 198 | 240 | IPR026893 | GO:0004721 | |
| Blo17g00378 | 471 | Gene3D | - | 317 | 453 | - | - | |
| Blo17g00378 | 471 | ProSiteProfiles | C2 tensin-type domain profile. | 286 | 451 | IPR014020 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo06g00279 | Blo-Chr6:15505319 | Blo17g00378 | Blo-Chr17:4194493 | 4.94E-47 | dispersed | |
| Blo17g00378 | Blo-Chr17:4194493 | Blo04g01266 | Blo-Chr4:25890548 | 9.86E-47 | dispersed | |
| Blo17g00378 | Blo-Chr17:4194493 | Blo13g00325 | Blo-Chr13:18585588 | 1.43E-48 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo17g00378 | K01110 | - | zju:107415906 | 640.958 |