Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00378 ATGAAACTGAAAAGGCAAGTGATTGAGATACAAGCACAGAAGCGTCAGGGGCAATCTCGTCCAGCAAAAATACACTCGTCTCCCACCCAGAGAAAGAAGCAGAGGGAGGAGAGCAGGCGACAACAGACAGCTAAGGCCTGGGCTTCAGCGAACGCAATCGATGCCACCAGAGAATTCACAAATAACAAGGGGCATGGGAAGGGGGAAAATCTAACTCTGCAACATCACCTGATAAATTATCTTTCCGAAAGCTTTTATCTTCGCCACTTGGTATCTAAGCAACGAAGAAGAATGCTTGTTGCCGGTTTTGATCTTGACATGTCCTATATCACAGATCGTATATTGGCAATGTCTTTCCCTGCAGAACGCATGCGTGCAGTTTATCGTAATCCTCTGTGGCAGGTTAAGTCTGTTCTTGACATGAGACATCGGGATCATTATAAGATATATAACCTATGCATAGAAGAATCATACGATCCATCTCATTTTCATGGCCGGGTAGAGGCATTTCCTTTTGATGACAACCATGTCCCACCTCTCCAAATGATTAAGCTTTTCTGCGAGAGTGTTCATTCATGGCTATCATGTAACCAAAAGAATGTTGCCGTGATACACTGCATGGCAGGCAAAGGTCGGACTGGCTTAATGGTATGTGCCTACCTTGTATACAGTGGCATGTCAGCGGAGGAGGCGCTGCAATTGTATGCCCATAGGCGGACCACCAATAATGAAGGGGTCTCGATTCCTAGCCAACGCCGTTACGTGGGCTACTGGGCAAGTTTACTTTCTTTTCCTAAGGGCGTTCTTCACGGACCTCCAGATGTAAAATTTTCAAAGGCTTGTAGTAGGGAACTGCGCCGAATTCGGCTTTATGACACAATTAATATTGAATCAGTCTTCTTTGTCATCACGGAGCTCCAAGAAGCTTCAAGTAAGCTGTACACTCCGTCGGTTGAAGTTACGCGGAGTTATTGCAGGCGAATAAAGAAAGGTTATCAGAGAAGCGGCAGCCATCAGTACTATCTCTCTTTTGTTGAAGATGATCAAAAAAGGAACATGACAGAAGAAGAAAAATTTCATAATGTAGTTCAAATGGACACGGAGATTCCAGTATTCTACGAAAAGTCTTGTCTTGACTACAATTTCAATAAACCTCTAACAGTAACTGGAGATGTGCGAGTCATATTCTATCAGAAAATGATTGGAGGGCGTTTTTTCTATGCCTGCTTCAACACATCCTTCATCAAGAACAGCTTGCTTCAGCTTACTGCTGGTGAGTTGGATAAAGTTGGGAGCAGAGGAAAATCAATATGCGGCCCTGCGTTTTGCTTGGAGCTCCTATTCGGACCGGCCAATGCTAAACACTCGTTTTCGACATGGTCCGACAATGATGATTCTTCCGACGAGGTGTTCTAA 1416 44.42 MKLKRQVIEIQAQKRQGQSRPAKIHSSPTQRKKQREESRRQQTAKAWASANAIDATREFTNNKGHGKGENLTLQHHLINYLSESFYLRHLVSKQRRRMLVAGFDLDMSYITDRILAMSFPAERMRAVYRNPLWQVKSVLDMRHRDHYKIYNLCIEESYDPSHFHGRVEAFPFDDNHVPPLQMIKLFCESVHSWLSCNQKNVAVIHCMAGKGRTGLMVCAYLVYSGMSAEEALQLYAHRRTTNNEGVSIPSQRRYVGYWASLLSFPKGVLHGPPDVKFSKACSRELRRIRLYDTINIESVFFVITELQEASSKLYTPSVEVTRSYCRRIKKGYQRSGSHQYYLSFVEDDQKRNMTEEEKFHNVVQMDTEIPVFYEKSCLDYNFNKPLTVTGDVRVIFYQKMIGGRFFYACFNTSFIKNSLLQLTAGELDKVGSRGKSICGPAFCLELLFGPANAKHSFSTWSDNDDSSDEVF 471
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
17 4194493 4203241 - BLOR16199 Blo17g00378 72766
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00378 471 PANTHER BNAC03G16750D PROTEIN 69 455 - -
Blo17g00378 471 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 103 262 IPR029021 -
Blo17g00378 471 CDD PTP_PTEN 106 261 IPR045101 GO:0016791
Blo17g00378 471 ProSitePatterns Tyrosine specific protein phosphatases active site. 204 214 IPR016130 GO:0016311|GO:0016791
Blo17g00378 471 Gene3D Protein tyrosine phosphatase superfamily 83 264 IPR029021 -
Blo17g00378 471 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 184 239 IPR000387 GO:0016311|GO:0016791
Blo17g00378 471 ProSiteProfiles Phosphatase tensin-type domain profile. 96 265 IPR029023 -
Blo17g00378 471 Pfam C2 domain of PTEN tumour-suppressor protein 365 448 IPR014020 -
Blo17g00378 471 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 372 450 IPR035892 -
Blo17g00378 471 MobiDBLite consensus disorder prediction 11 25 - -
Blo17g00378 471 SMART PTEN_C2_2 307 450 IPR014020 -
Blo17g00378 471 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 69 455 - -
Blo17g00378 471 MobiDBLite consensus disorder prediction 1 49 - -
Blo17g00378 471 Pfam Tyrosine phosphatase family 198 240 IPR026893 GO:0004721
Blo17g00378 471 Gene3D - 317 453 - -
Blo17g00378 471 ProSiteProfiles C2 tensin-type domain profile. 286 451 IPR014020 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00279 Blo-Chr6:15505319 Blo17g00378 Blo-Chr17:4194493 4.94E-47 dispersed
Blo17g00378 Blo-Chr17:4194493 Blo04g01266 Blo-Chr4:25890548 9.86E-47 dispersed
Blo17g00378 Blo-Chr17:4194493 Blo13g00325 Blo-Chr13:18585588 1.43E-48 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00378 K01110 - zju:107415906 640.958