Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo17g00411 ATGATATCAGATCAAAATCCTGACTGGAAGTGTGGCCGACGAGGACGTCGGGTCCCCAAGGGGGAGGAGATTGTGGCATCCCGCCCTATGAAGGCCAGGAAAGGCTCAGTTGTGGGTCTGGCCTGTATCAGGGGTGCACAATCCCACATCGCTTGGGAGAGTAAAAAATGCATGCTTCTAAAGCTCATGTATCATGCTCCTGTGACTGCTGGTTATCATCACAGTGGCTGGGCGAAGATTGGGGCAGCCGTCAATCCCTTCATTCATCGATACGTCCCGTTTCTCAATACTCCCATCTCTGCAGCTCAAAGATGGTGGTTCAGCCCGGAAGCTGTGTCAAGTCGGATTCTTTGCCTTTCCTGCCGGCGGAGGATGGACAGCTCTGTGGTGGGTGAGGCTGATTCGAATTTGAGGCATTTGCTTTCTACCATTGGCAGTAGTTCTAGCCACCAGAGACGGCGTCGCGTCGTTGGTTTGAAGCCTGGAGCGCCTCGACGACAACAGTCTTTTGGTCGCGATATTGGCCACGCCGCTGCCGAGACTTATCTTGTCACTCGGCTCAGTTTCACGCTTCTCCGATGTCTCGGGGTAGGTTACCTGTGGGTGACGCGATTAACTGCCCTTCTTTGGTATGCCTTGCTACTTATGCCTGGCTTTCTTAAAGTTGCATACTATTATTACTTCTCAAGCCAGATTAAGCGGAGTATTGTCTATGGAAACCAGCCAAGAAATAGGTTGGATTTGTATTTACCTGTTCATAATGATGGAAAAAAGCCAGTTGTAATTTTCGTGACTGGTGGAGCTTGGATTATTGGGTACAAAGCATGGGGTGCTCTTTTGGGTCTGCAATTGGCTGAAAGAGACATCATGGTTGCTTGCGTTGATTACCGAGTCTTGATTTTCGGCTGCGCGTTTAGAAATTTTCCCCAGGGAACTATAAGTGACATGGTGACAGATGCTTCTGAAGCCATCTCTTTTGTTTGCGACCATGTAGCCAAATATGGCGGTGACCTTAACAGAATGTATTTGATGGGCCAATCAGCTGGTGCTCATATATCTGCTTGTGCGCTCTTGGATCAAACGGTCAAAGAACTTAAAAAAGAAGAGCCTTTATCTTGGAAGGCTTCTCAATTTAAGGCCTATTTCGGATTATCCGGATGTTACAACTTAACTAATTTAGTCGATCACTTCCATAACCGAGGTTTATATCGTTCCATCTTCTTGAGCATAATGGAAGGGGAACAAAAGCTAGAGCAATTTTCTCCTGAAGTTAGAATCAAAGACCCAAGCATTGCAGCTGCAGCTTCTCTCTTACCCCCTATTGTTCTTTTCCATGGAACTGCTGATTATTCCATACCGTCAGATGCTAGTAAAAACTTTGTGGAGACTCTTCAAAAGGCAGGGGCGCAGGCCGAGCTGGTTCTCTACAACGGAAAAACTCATACAGATTTGTTTATTCAGGATCCTCTAAGAGGAGGCAAAGATGAACTTTTCGATCATCTAGTTTCGGTGATACATGCGGGCGACGAAGAAGCATTAGCAAATGATGCCACCGCCCCTCCGAGAAAAAGCCTCGTTCCTTGGATTTTGTTGGCATTAGCGCGAATGATCAGCCCTTTCTAA 1623 47.07 MISDQNPDWKCGRRGRRVPKGEEIVASRPMKARKGSVVGLACIRGAQSHIAWESKKCMLLKLMYHAPVTAGYHHSGWAKIGAAVNPFIHRYVPFLNTPISAAQRWWFSPEAVSSRILCLSCRRRMDSSVVGEADSNLRHLLSTIGSSSSHQRRRRVVGLKPGAPRRQQSFGRDIGHAAAETYLVTRLSFTLLRCLGVGYLWVTRLTALLWYALLLMPGFLKVAYYYYFSSQIKRSIVYGNQPRNRLDLYLPVHNDGKKPVVIFVTGGAWIIGYKAWGALLGLQLAERDIMVACVDYRVLIFGCAFRNFPQGTISDMVTDASEAISFVCDHVAKYGGDLNRMYLMGQSAGAHISACALLDQTVKELKKEEPLSWKASQFKAYFGLSGCYNLTNLVDHFHNRGLYRSIFLSIMEGEQKLEQFSPEVRIKDPSIAAAASLLPPIVLFHGTADYSIPSDASKNFVETLQKAGAQAELVLYNGKTHTDLFIQDPLRGGKDELFDHLVSVIHAGDEEALANDATAPPRKSLVPWILLALARMISPF 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 4857971 4864854 - BLOR16232 Blo17g00411 72799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo17g00411 540 Gene3D alpha/beta hydrolase 225 489 IPR029058 -
Blo17g00411 540 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL2-RELATED 112 526 - -
Blo17g00411 540 Pfam BD-FAE 246 464 - -
Blo17g00411 540 SUPERFAMILY alpha/beta-Hydrolases 210 505 IPR029058 -
Blo17g00411 540 PANTHER ARYLACETAMIDE DEACETYLASE 112 526 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo17g00411 Blo-Chr17:4857971 Blo16g00453 Blo-Chr16:18062777 5.46E-11 dispersed
Blo06g00961 Blo-Chr6:32842305 Blo17g00411 Blo-Chr17:4857971 0 transposed
Blo17g00411 Blo-Chr17:4857971 Blo18g00433 Blo-Chr18:4768102 4.13E-22 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo17g00411 K15889 - thj:104820970 568.54